RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 ZNF407Q9C0G0 2248 aa4.8□□□□□ -1.64
CTNNA1-225ENST00000520865 NIPBLQ6KC79 2804 aaeCLIP4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 DNAJC13O75165 2243 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 TRAV21A0A0B4J279 112 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 H0YGX0 51 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 H7BZZ5 65 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 LOXP28300 417 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 DEFB113Q30KQ7 82 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 Q6ZRU5 148 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 LINC01561Q8N1V8 128 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 RNASE6Q93091 150 aaKnown RBP4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 GAFA1Q96PS6 74 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 CYSTM1Q9H1C7 97 aa4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 RAI1Q7Z5J4 1906 aaPredicted RBP4.79□□□□□ -1.64
CTNNA1-225ENST00000520865 ZNF469Q96JG9 3925 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 MAP1AP78559 2803 aaPredicted RBP4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 DNHD1Q96M86 4753 aa4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 SOCS3O14543 225 aa4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 ERC2-IT1O76042 136 aa4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 IGHV3-30-3P0DP02 117 aa4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 RNASE4P34096 147 aaKnown RBP4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 CNEP1R1Q8N9A8 125 aa4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 Q8TAT8 98 aa4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 NDUFA12Q9UI09 145 aa4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 PHLDA3Q9Y5J5 127 aa4.78□□□□□ -1.64
CTNNA1-225ENST00000520865 FLNAP21333 2647 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 TRAV13-2A0A0B4J235 113 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 PLAC8L1A1L4L8 177 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 JMJD7-PLA2G4BH0Y9G9 81 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 NDUFA1O15239 70 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 ATP6V0E1O15342 81 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 LY6G6DO95868 133 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 CCKP06307 115 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 IGHV4-38-2P0DP08 117 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 RPL28P46779 137 aaKnown RBP4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 FP248Q71RG6 208 aaPredicted RBP4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 FAM19A1Q7Z5A9 133 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 LY6G5BQ8NDX9 201 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 BRK1Q8WUW1 75 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
CTNNA1-225ENST00000520865 JMJD1CQ15652 2540 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 IGHV1-3A0A0C4DH29 117 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 A0A0U1RRA0 63 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 IBA57-AS1B1ANH7 110 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 M0R1W7 72 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 TFF1P04155 84 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 S100A4P26447 101 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 KLK9Q2XQG4 91 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 RUSC1-AS1Q66K80 236 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 C20orf203Q8NBC4 194 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 RPL39LQ96EH5 51 aaKnown RBP4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 KLK9Q9UKQ9 250 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 SMAD5-AS1Q9Y6J3 95 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 DOCK7Q96N67 2140 aa4.76□□□□□ -1.65
CTNNA1-225ENST00000520865 IGLV3-9A0A075B6K5 115 aa4.75□□□□□ -1.65
CTNNA1-225ENST00000520865 IGHV3-64DA0A0J9YX35 117 aa4.75□□□□□ -1.65
CTNNA1-225ENST00000520865 A0A1W2PPR1 153 aa4.75□□□□□ -1.65
CTNNA1-225ENST00000520865 LINC01547P58512 204 aaPredicted RBP4.75□□□□□ -1.65
CTNNA1-225ENST00000520865 FBXL19-AS1Q494R0 122 aa4.75□□□□□ -1.65
CTNNA1-225ENST00000520865 KRTAP5-3Q6L8H2 238 aa4.75□□□□□ -1.65
CTNNA1-225ENST00000520865 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
CTNNA1-225ENST00000520865 KIF25-AS1Q9Y6Z4 181 aa4.75□□□□□ -1.65
CTNNA1-225ENST00000520865 RTTNQ86VV8 2226 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 FN1P02751 2386 aaKnown RBP4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 IGLV11-55A0A075B6I3 123 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 NDUFB3O43676 98 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 MGPP08493 103 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 DYNLRB2Q8TF09 96 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 CCL19Q99731 98 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 LINC00846Q9NV44 126 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 C22orf24Q9Y442 160 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 FBN3Q75N90 2809 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 VPS13CQ709C8 3753 aa4.74□□□□□ -1.65
CTNNA1-225ENST00000520865 HRNRQ86YZ3 2850 aaPredicted RBP4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 IGLV4-3A0A075B6K6 122 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 IGHV3-21A0A0B4J1V1 117 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 A0A0U1RQV1 116 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 LYRM9A8MSI8 78 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 LINC00315P59091 139 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 BLCAPP62952 87 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 RBM3P98179 157 aaKnown RBP4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 ADAMTSL4-AS1Q5T5F5 129 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 FAM223AQ8IWN6 122 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 NPBQ8NG41 125 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 LINC00308Q8TCZ7 52 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 UBL5Q9BZL1 73 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 KAAG1Q9UBP8 84 aa4.73□□□□□ -1.65
CTNNA1-225ENST00000520865 CSPG4Q6UVK1 2322 aa4.72□□□□□ -1.65
CTNNA1-225ENST00000520865 IGHV4-61A0A0C4DH41 118 aa4.72□□□□□ -1.65
CTNNA1-225ENST00000520865 H3BQ85 93 aa4.72□□□□□ -1.65
CTNNA1-225ENST00000520865 IGHV4-59P01825 116 aa4.72□□□□□ -1.65
CTNNA1-225ENST00000520865 IGHV1-8P0DP01 117 aa4.72□□□□□ -1.65
CTNNA1-225ENST00000520865 NSD1Q96L73 2696 aaPredicted RBP4.72□□□□□ -1.65
CTNNA1-225ENST00000520865 HIVEP2P31629 2446 aa4.72□□□□□ -1.65
CTNNA1-225ENST00000520865 FREM1Q5H8C1 2179 aa4.71□□□□□ -1.65
CTNNA1-225ENST00000520865 IGKV2D-30A0A075B6S6 120 aa4.71□□□□□ -1.66
CTNNA1-225ENST00000520865 A0A0J9YXV3 536 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms