RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 H3BS24 57 aa7.38□□□□□ -1.23
PDGFRB-207ENST00000520579 ADORA2A-AS1P86434 159 aa7.38□□□□□ -1.23
PDGFRB-207ENST00000520579 PSMB8P28062 276 aa7.38□□□□□ -1.23
PDGFRB-207ENST00000520579 MRPL53Q96EL3 112 aaKnown RBP7.38□□□□□ -1.23
PDGFRB-207ENST00000520579 LINC00467Q9BRT7 94 aa7.38□□□□□ -1.23
PDGFRB-207ENST00000520579 BPESC1Q9GZL8 116 aa7.38□□□□□ -1.23
PDGFRB-207ENST00000520579 ITPR1Q14643 2758 aa7.37□□□□□ -1.23
PDGFRB-207ENST00000520579 TRBV27A0A0K0K1C4 114 aa7.37□□□□□ -1.23
PDGFRB-207ENST00000520579 ODF3BA8MYP8 253 aa7.37□□□□□ -1.23
PDGFRB-207ENST00000520579 F8WEM9 126 aa7.37□□□□□ -1.23
PDGFRB-207ENST00000520579 FAM218AQ96MZ4 157 aa7.37□□□□□ -1.23
PDGFRB-207ENST00000520579 H3BUX3 64 aa7.37□□□□□ -1.23
PDGFRB-207ENST00000520579 A0A087WZ39 114 aa7.37□□□□□ -1.23
PDGFRB-207ENST00000520579 NCR3O14931 201 aa7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 COX6A2Q02221 97 aa7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 VSIG2Q96IQ7 327 aa7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 LITAFQ99732 161 aa7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 IGHV1OR15-1A0A075B7D0 117 aa7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 CFHR3Q02985 330 aa7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 Q6ZSN1 163 aa7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 APRG1Q8IVJ8 170 aa7.36□□□□□ -1.23
PDGFRB-207ENST00000520579 Q8N6K4 173 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 LINC00308Q8TCZ7 52 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 IGHV4OR15-8A0A075B7B6 117 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 A0A087WW49 117 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 LRCOL1A6NCL2 159 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 CCKP06307 115 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 LINC00158P58513 81 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 ZANQ9Y493 2812 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 LRRK2Q5S007 2527 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 NBEAL2Q6ZNJ1 2754 aa7.35□□□□□ -1.23
PDGFRB-207ENST00000520579 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.34□□□□□ -1.23
PDGFRB-207ENST00000520579 RMI2Q96E14 147 aa7.34□□□□□ -1.23
PDGFRB-207ENST00000520579 UBE2E2Q96LR5 201 aa7.34□□□□□ -1.23
PDGFRB-207ENST00000520579 C16orf95Q9H693 158 aa7.34□□□□□ -1.23
PDGFRB-207ENST00000520579 ABCA12Q86UK0 2595 aa7.34□□□□□ -1.23
PDGFRB-207ENST00000520579 C5orf56Q8N8D9 126 aa7.34□□□□□ -1.23
PDGFRB-207ENST00000520579 PF4P02776 101 aa7.33□□□□□ -1.24
PDGFRB-207ENST00000520579 TMEM190Q8WZ59 177 aa7.33□□□□□ -1.24
PDGFRB-207ENST00000520579 IGHV1-69P01742 117 aa7.33□□□□□ -1.24
PDGFRB-207ENST00000520579 MYO18BQ8IUG5 2567 aa7.33□□□□□ -1.24
PDGFRB-207ENST00000520579 MTORP42345 2549 aa7.33□□□□□ -1.24
PDGFRB-207ENST00000520579 LECT2O14960 151 aa7.33□□□□□ -1.24
PDGFRB-207ENST00000520579 DEFB136Q30KP8 78 aa7.33□□□□□ -1.24
PDGFRB-207ENST00000520579 Q8NA96 180 aa7.33□□□□□ -1.24
PDGFRB-207ENST00000520579 COX7A2LO14548 114 aa7.32□□□□□ -1.24
PDGFRB-207ENST00000520579 DEFB131AP59861 70 aa7.32□□□□□ -1.24
PDGFRB-207ENST00000520579 DEFB121Q5J5C9 76 aa7.32□□□□□ -1.24
PDGFRB-207ENST00000520579 LENEPQ9Y5L5 61 aa7.32□□□□□ -1.24
PDGFRB-207ENST00000520579 MINOS1-NBL1R4GNA1 71 aa7.32□□□□□ -1.24
PDGFRB-207ENST00000520579 CRPP02741 224 aa7.32□□□□□ -1.24
PDGFRB-207ENST00000520579 IGHV4-38-2P0DP08 117 aa7.32□□□□□ -1.24
PDGFRB-207ENST00000520579 C11orf44Q8N8P7 122 aa7.32□□□□□ -1.24
PDGFRB-207ENST00000520579 NDUFA4O00483 81 aa7.31□□□□□ -1.24
PDGFRB-207ENST00000520579 C19orf54Q5BKX5 351 aa7.31□□□□□ -1.24
PDGFRB-207ENST00000520579 ENHOQ6UWT2 76 aa7.31□□□□□ -1.24
PDGFRB-207ENST00000520579 MAPK1IP1LQ8NDC0 245 aa7.31□□□□□ -1.24
PDGFRB-207ENST00000520579 A0A087WYN8 130 aa7.31□□□□□ -1.24
PDGFRB-207ENST00000520579 SOCS3O14543 225 aa7.31□□□□□ -1.24
PDGFRB-207ENST00000520579 DCANP1Q8TF63 244 aa7.31□□□□□ -1.24
PDGFRB-207ENST00000520579 RPL36AP83881 106 aaKnown RBP7.3□□□□□ -1.24
PDGFRB-207ENST00000520579 SPTSSBQ8NFR3 76 aa7.3□□□□□ -1.24
PDGFRB-207ENST00000520579 RPL36ALQ969Q0 106 aaKnown RBP7.3□□□□□ -1.24
PDGFRB-207ENST00000520579 LINC00846Q9NV44 126 aa7.3□□□□□ -1.24
PDGFRB-207ENST00000520579 A0A1W2PPR1 153 aa7.3□□□□□ -1.24
PDGFRB-207ENST00000520579 MIR7-3HGQ8N6C7 128 aa7.3□□□□□ -1.24
PDGFRB-207ENST00000520579 CHD6Q8TD26 2715 aa7.3□□□□□ -1.24
PDGFRB-207ENST00000520579 PRB2P02812 416 aaPredicted RBP7.29□□□□□ -1.24
PDGFRB-207ENST00000520579 APOC4P55056 127 aa7.29□□□□□ -1.24
PDGFRB-207ENST00000520579 KLLNB2CW77 178 aa7.29□□□□□ -1.24
PDGFRB-207ENST00000520579 FBN2P35556 2912 aa7.29□□□□□ -1.24
PDGFRB-207ENST00000520579 HIVEP2P31629 2446 aa7.29□□□□□ -1.24
PDGFRB-207ENST00000520579 H7BZZ5 65 aa7.29□□□□□ -1.24
PDGFRB-207ENST00000520579 MRPS36P82909 103 aaKnown RBP7.29□□□□□ -1.24
PDGFRB-207ENST00000520579 CLPSL2Q6UWE3 100 aa7.29□□□□□ -1.24
PDGFRB-207ENST00000520579 TRGV1A0A0A0MS02 117 aa7.28□□□□□ -1.24
PDGFRB-207ENST00000520579 PSPHP1O15172 72 aa7.28□□□□□ -1.24
PDGFRB-207ENST00000520579 LYPD5Q6UWN5 251 aa7.28□□□□□ -1.24
PDGFRB-207ENST00000520579 IGFL3Q6UXB1 125 aa7.28□□□□□ -1.24
PDGFRB-207ENST00000520579 RBM12B-AS1Q9P1G2 102 aa7.28□□□□□ -1.24
PDGFRB-207ENST00000520579 RPL28P46779 137 aaKnown RBP7.28□□□□□ -1.24
PDGFRB-207ENST00000520579 Q6JHZ5 121 aa7.28□□□□□ -1.24
PDGFRB-207ENST00000520579 TRBV6-5A0A0K0K1A5 114 aa7.27□□□□□ -1.24
PDGFRB-207ENST00000520579 SND1-IT1Q9HBX3 110 aa7.27□□□□□ -1.25
PDGFRB-207ENST00000520579 UBE2D4Q9Y2X8 147 aa7.27□□□□□ -1.25
PDGFRB-207ENST00000520579 A0A0J9YX75 114 aa7.27□□□□□ -1.25
PDGFRB-207ENST00000520579 PRR3P79522 188 aaKnown RBP7.27□□□□□ -1.25
PDGFRB-207ENST00000520579 MED14OSP0DP75 135 aa7.27□□□□□ -1.25
PDGFRB-207ENST00000520579 NOTCH2Q04721 2471 aa7.26□□□□□ -1.25
PDGFRB-207ENST00000520579 CHCHD7Q9BUK0 85 aa7.26□□□□□ -1.25
PDGFRB-207ENST00000520579 FAM104AQ969W3 186 aa7.26□□□□□ -1.25
PDGFRB-207ENST00000520579 F8P00451 2351 aa7.25□□□□□ -1.25
PDGFRB-207ENST00000520579 CELSR2Q9HCU4 2923 aa7.25□□□□□ -1.25
PDGFRB-207ENST00000520579 PLAC8L1A1L4L8 177 aa7.25□□□□□ -1.25
PDGFRB-207ENST00000520579 UBE2L6O14933 153 aa7.25□□□□□ -1.25
PDGFRB-207ENST00000520579 SCXQ7RTU7 201 aa7.25□□□□□ -1.25
PDGFRB-207ENST00000520579 NIPBLQ6KC79 2804 aaeCLIP7.25□□□□□ -1.25
PDGFRB-207ENST00000520579 C19orf84I3L1E1 186 aa7.25□□□□□ -1.25
PDGFRB-207ENST00000520579 HAMPP81172 84 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms