RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 Q6ZRP5 223 aa10.09□□□□□ -0.79
IGHV3-42-201ENST00000520410 TMEM136Q6ZRR5 245 aa10.09□□□□□ -0.79
IGHV3-42-201ENST00000520410 TGIF2-C20orf24A0A0A6YYL0 155 aa10.08□□□□□ -0.8
IGHV3-42-201ENST00000520410 MT1HL1P0DM35 61 aa10.08□□□□□ -0.8
IGHV3-42-201ENST00000520410 ATP5L2Q7Z4Y8 100 aa10.08□□□□□ -0.8
IGHV3-42-201ENST00000520410 OR10D4PQ8NGN7 298 aa10.08□□□□□ -0.8
IGHV3-42-201ENST00000520410 C2orf48Q96LS8 159 aa10.08□□□□□ -0.8
IGHV3-42-201ENST00000520410 FAT3Q8TDW7 4589 aa10.07□□□□□ -0.8
IGHV3-42-201ENST00000520410 REG3GQ6UW15 175 aa10.07□□□□□ -0.8
IGHV3-42-201ENST00000520410 MAP1LC3AQ9H492 121 aa10.07□□□□□ -0.8
IGHV3-42-201ENST00000520410 NDUFA1O15239 70 aa10.06□□□□□ -0.8
IGHV3-42-201ENST00000520410 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-42-201ENST00000520410 MT-ND6P03923 174 aa10.05□□□□□ -0.8
IGHV3-42-201ENST00000520410 C9orf116Q5BN46 136 aaPredicted RBP10.05□□□□□ -0.8
IGHV3-42-201ENST00000520410 SPINK6Q6UWN8 80 aa10.05□□□□□ -0.8
IGHV3-42-201ENST00000520410 A0A1W2PNN7 141 aa10.04□□□□□ -0.8
IGHV3-42-201ENST00000520410 MT-ND4LP03901 98 aa10.04□□□□□ -0.8
IGHV3-42-201ENST00000520410 MRPS36P82909 103 aaKnown RBP10.04□□□□□ -0.8
IGHV3-42-201ENST00000520410 PNRC1Q12796 327 aaPredicted RBP10.03□□□□□ -0.8
IGHV3-42-201ENST00000520410 Q6ZN92 141 aa10.03□□□□□ -0.8
IGHV3-42-201ENST00000520410 TEX43Q6ZNM6 134 aa10.03□□□□□ -0.8
IGHV3-42-201ENST00000520410 ANAPC16Q96DE5 110 aa10.03□□□□□ -0.8
IGHV3-42-201ENST00000520410 IMMP2LQ96T52 175 aa10.03□□□□□ -0.8
IGHV3-42-201ENST00000520410 C2orf88Q9BSF0 95 aa10.03□□□□□ -0.8
IGHV3-42-201ENST00000520410 GAGE2EQ4V326 116 aa10.02□□□□□ -0.81
IGHV3-42-201ENST00000520410 PHF5AQ7RTV0 110 aaKnown RBP10.02□□□□□ -0.81
IGHV3-42-201ENST00000520410 TMEM141Q96I45 108 aa10.02□□□□□ -0.81
IGHV3-42-201ENST00000520410 GAGE2DQ9UEU5 116 aa10.02□□□□□ -0.81
IGHV3-42-201ENST00000520410 IGLV4-3A0A075B6K6 122 aa10.01□□□□□ -0.81
IGHV3-42-201ENST00000520410 IGHV3OR16-9A0A0B4J2B5 98 aa10.01□□□□□ -0.81
IGHV3-42-201ENST00000520410 C1orf137Q5JT78 98 aa10.01□□□□□ -0.81
IGHV3-42-201ENST00000520410 FAM19A5Q7Z5A7 132 aaPredicted RBP10.01□□□□□ -0.81
IGHV3-42-201ENST00000520410 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
IGHV3-42-201ENST00000520410 MRPL35Q9NZE8 188 aaKnown RBP10.01□□□□□ -0.81
IGHV3-42-201ENST00000520410 CYSLTR1Q9Y271 337 aa10.01□□□□□ -0.81
IGHV3-42-201ENST00000520410 RNF151Q2KHN1 245 aa10□□□□□ -0.81
IGHV3-42-201ENST00000520410 UNQ6190/PRO20217Q6UXQ8 127 aa10□□□□□ -0.81
IGHV3-42-201ENST00000520410 LAMTOR2Q9Y2Q5 125 aa10□□□□□ -0.81
IGHV3-42-201ENST00000520410 F8WDY8 70 aa9.99□□□□□ -0.81
IGHV3-42-201ENST00000520410 C10orf25Q5T742 122 aa9.99□□□□□ -0.81
IGHV3-42-201ENST00000520410 C2orf66Q6UXQ4 117 aa9.99□□□□□ -0.81
IGHV3-42-201ENST00000520410 FAM104AQ969W3 186 aa9.99□□□□□ -0.81
IGHV3-42-201ENST00000520410 PACRGQ96M98 296 aaPredicted RBP9.99□□□□□ -0.81
IGHV3-42-201ENST00000520410 CTDSP1Q9GZU7 261 aa9.99□□□□□ -0.81
IGHV3-42-201ENST00000520410 TOMM7Q9P0U1 55 aa9.99□□□□□ -0.81
IGHV3-42-201ENST00000520410 PSORS1C2Q9UIG4 136 aa9.99□□□□□ -0.81
IGHV3-42-201ENST00000520410 PRSS2P07478 247 aa9.98□□□□□ -0.81
IGHV3-42-201ENST00000520410 ODF1Q14990 250 aa9.98□□□□□ -0.81
IGHV3-42-201ENST00000520410 Q8N8P6 123 aa9.98□□□□□ -0.81
IGHV3-42-201ENST00000520410 C6orf48Q9UBA6 75 aa9.98□□□□□ -0.81
IGHV3-42-201ENST00000520410 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
IGHV3-42-201ENST00000520410 A0A087WZ39 114 aa9.97□□□□□ -0.81
IGHV3-42-201ENST00000520410 FAM168BA1KXE4 195 aa9.97□□□□□ -0.81
IGHV3-42-201ENST00000520410 ORMDL2Q53FV1 153 aa9.97□□□□□ -0.81
IGHV3-42-201ENST00000520410 LINC00242Q5T6M2 205 aa9.97□□□□□ -0.81
IGHV3-42-201ENST00000520410 ZC2HC1BQ5TFG8 222 aa9.97□□□□□ -0.81
IGHV3-42-201ENST00000520410 VCX2Q9H322 139 aa9.97□□□□□ -0.81
IGHV3-42-201ENST00000520410 UBE2BP63146 152 aa9.96□□□□□ -0.82
IGHV3-42-201ENST00000520410 C2orf82Q6UX34 121 aa9.96□□□□□ -0.82
IGHV3-42-201ENST00000520410 HMCN2Q8NDA2 5059 aa9.95□□□□□ -0.82
IGHV3-42-201ENST00000520410 UBE2D1P51668 147 aa9.94□□□□□ -0.82
IGHV3-42-201ENST00000520410 CKS1BP61024 79 aa9.94□□□□□ -0.82
IGHV3-42-201ENST00000520410 SRSF9Q13242 221 aaKnown RBP eCLIP9.94□□□□□ -0.82
IGHV3-42-201ENST00000520410 M0QXV9 152 aa9.93□□□□□ -0.82
IGHV3-42-201ENST00000520410 NXT2Q9NPJ8 142 aaKnown RBP9.93□□□□□ -0.82
IGHV3-42-201ENST00000520410 TRBV30A0A0K0K1B3 111 aa9.92□□□□□ -0.82
IGHV3-42-201ENST00000520410 PRSS47A8MTI9 375 aa9.92□□□□□ -0.82
IGHV3-42-201ENST00000520410 TLX1NBP0CAT3 122 aa9.92□□□□□ -0.82
IGHV3-42-201ENST00000520410 KIAA1644Q3SXP7 199 aa9.92□□□□□ -0.82
IGHV3-42-201ENST00000520410 GEMIN7Q9H840 131 aaKnown RBP9.92□□□□□ -0.82
IGHV3-42-201ENST00000520410 C6orf226Q5I0X4 101 aa9.91□□□□□ -0.82
IGHV3-42-201ENST00000520410 CLLU1Q5K131 121 aa9.91□□□□□ -0.82
IGHV3-42-201ENST00000520410 PAPPA-AS1Q5QFB9 102 aa9.91□□□□□ -0.82
IGHV3-42-201ENST00000520410 IGLV7-43P04211 117 aa9.9□□□□□ -0.82
IGHV3-42-201ENST00000520410 G0S2P27469 103 aa9.9□□□□□ -0.82
IGHV3-42-201ENST00000520410 KIAA0087Q14695 138 aa9.9□□□□□ -0.82
IGHV3-42-201ENST00000520410 LINC00173Q6ZV60 143 aa9.9□□□□□ -0.82
IGHV3-42-201ENST00000520410 ALKBH7Q9BT30 221 aaPredicted RBP9.9□□□□□ -0.82
IGHV3-42-201ENST00000520410 NDUFC2-KCTD14E9PQ53 114 aa9.89□□□□□ -0.83
IGHV3-42-201ENST00000520410 K7EMI3 77 aa9.89□□□□□ -0.83
IGHV3-42-201ENST00000520410 S100PP25815 95 aa9.89□□□□□ -0.83
IGHV3-42-201ENST00000520410 LINC00469Q8N7U9 141 aa9.89□□□□□ -0.83
IGHV3-42-201ENST00000520410 DIRC1Q969H9 104 aa9.89□□□□□ -0.83
IGHV3-42-201ENST00000520410 HERVK_113P63121 156 aa9.88□□□□□ -0.83
IGHV3-42-201ENST00000520410 SEC11AP67812 179 aa9.88□□□□□ -0.83
IGHV3-42-201ENST00000520410 LINC01561Q8N1V8 128 aa9.88□□□□□ -0.83
IGHV3-42-201ENST00000520410 AMELXQ99217 191 aa9.88□□□□□ -0.83
IGHV3-42-201ENST00000520410 KRTAP10-8P60410 259 aa9.87□□□□□ -0.83
IGHV3-42-201ENST00000520410 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
IGHV3-42-201ENST00000520410 IGIPA6NJ69 53 aa9.86□□□□□ -0.83
IGHV3-42-201ENST00000520410 NPSP0C0P6 89 aa9.86□□□□□ -0.83
IGHV3-42-201ENST00000520410 ADCYAP1P18509 176 aa9.86□□□□□ -0.83
IGHV3-42-201ENST00000520410 CDKN2A-AS1Q9UH64 79 aa9.86□□□□□ -0.83
IGHV3-42-201ENST00000520410 C9orf129Q5T035 196 aaKnown RBP9.85□□□□□ -0.83
IGHV3-42-201ENST00000520410 UQCC3Q6UW78 93 aa9.85□□□□□ -0.83
IGHV3-42-201ENST00000520410 KRTAP11-1Q8IUC1 163 aa9.85□□□□□ -0.83
IGHV3-42-201ENST00000520410 Q8IZM0 81 aa9.85□□□□□ -0.83
IGHV3-42-201ENST00000520410 TOMM6Q96B49 74 aa9.85□□□□□ -0.83
IGHV3-42-201ENST00000520410 TIMM17AQ99595 171 aa9.85□□□□□ -0.83
IGHV3-42-201ENST00000520410 SMCO4Q9NRQ5 59 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms