RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 CELA1Q9UNI1 258 aa4□□□□□ -1.77
CTNNA1-220ENST00000520260 AGRNO00468 2067 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 PRKDCP78527 4128 aaKnown RBP3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 IGKV3D-20A0A0C4DH25 116 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 TRBV10-1A0A0K0K1A3 114 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 LCE6AA0A183 80 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 F5H697 171 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 RPL32P62910 135 aaKnown RBP3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 RPL36AP83881 106 aaKnown RBP3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 ZNF56Q15929 161 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 PRR9Q5T870 116 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 C10orf126Q8N4M7 172 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 RPL36ALQ969Q0 106 aaKnown RBP3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 C9orf85Q96MD7 179 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 MDFICQ9P1T7 246 aa3.99□□□□□ -1.77
CTNNA1-220ENST00000520260 PRSS29PA6NIE9 313 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 ZNF815PA8K554 130 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 RS1O15537 224 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 GNRH2O43555 120 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 PSMB2P49721 201 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 HERVK_113P61574 105 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 FAM74A4Q5TZK3 123 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 POM121L12Q8N7R1 296 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 LINC00476Q8WZB0 136 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 SCGB3A1Q96QR1 104 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 ANAPC13Q9BS18 74 aa3.98□□□□□ -1.77
CTNNA1-220ENST00000520260 A0A0J9YY99 117 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 PLAC8L1A1L4L8 177 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 K7EQD1 137 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 TCL1BO95988 128 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 IGHV3-53P01767 116 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 TIRAPP58753 221 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 SUMO2P61956 95 aaKnown RBP3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 CFAP161Q6P656 301 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 BAALCQ8WXS3 180 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 PLEKHB2Q96CS7 222 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 DNAJC30Q96LL9 226 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 DPH3P1Q9H4G8 78 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 C11orf21Q9P2W6 132 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 TNFRSF18Q9Y5U5 241 aa3.97□□□□□ -1.77
CTNNA1-220ENST00000520260 COL7A1Q02388 2944 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 LOC107984156A0A0G2JMH3 177 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 NXPH4O95158 308 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 IGHV3-30P01768 117 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 MGPP08493 103 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 SCGB1C2P0DMR2 95 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 IGHV3-30-5P0DP03 117 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 PRB4P10163 310 aaPredicted RBP3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 RNASE3P12724 160 aaKnown RBP3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 GYPEP15421 78 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 RPL13AP40429 203 aaKnown RBP3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 GAGE2BQ13066 116 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 SRSF9Q13242 221 aaKnown RBP eCLIP3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 GAGE2EQ4V326 116 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 C2orf66Q6UXQ4 117 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 SCGB1D4Q6XE38 83 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 DAZ4Q86SG3 579 aaKnown RBP3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 ARL17AQ8IVW1 177 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 ANKRD29Q8N6D5 301 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 SLC25A29Q8N8R3 303 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 RMI2Q96E14 147 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 TMEM141Q96I45 108 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 DAZ3Q9NR90 486 aaKnown RBP3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 GAGE2DQ9UEU5 116 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 PRO1854Q9UHT4 67 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 APLNQ9ULZ1 77 aa3.96□□□□□ -1.78
CTNNA1-220ENST00000520260 A0A0B4J2C4 111 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 GAGE12JA6NER3 117 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 C11orf86A6NJI1 115 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 SLC25A20O43772 301 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 CFC1BP0CG36 223 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 CFC1P0CG37 223 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 NDUFV3P56181 108 aaKnown RBP3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 GAGE4Q13068 117 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 FHL2Q14192 279 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 UPK3BQ9BT76 320 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 CHCHD7Q9BUK0 85 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 SPANXDQ9BXN6 97 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 SS18L2Q9UHA2 77 aa3.95□□□□□ -1.78
CTNNA1-220ENST00000520260 IGLV4-69A0A075B6H9 119 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 TRAV26-2A0A0B4J265 109 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 IGIPA6NJ69 53 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 UBE2L6O14933 153 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 SNCGO76070 127 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 IGHV3-33P01772 117 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 CRYGDP07320 174 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 IFITM1P13164 125 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 PMVKQ15126 192 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 LINC00336Q6ZUF6 198 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 AMELXQ99217 191 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 TIMM17AQ99595 171 aa3.94□□□□□ -1.78
CTNNA1-220ENST00000520260 A0A087WWL8 130 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 A0A096LPF7 62 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 IGHV3-73A0A0B4J1V6 119 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 TRBV10-2A0A0K0K1G8 114 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 FAM240AA0A1B0GVK7 77 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 B5MCH6 92 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 TSHBP01222 138 aa3.93□□□□□ -1.78
CTNNA1-220ENST00000520260 CRPP02741 224 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms