RNA–Protein interactions for RNA: ENST00000519436.1

ARFGEF1-206, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-206ENST00000519436 MT-ND4LP03901 98 aa13.25□□□□□ -0.29
ARFGEF1-206ENST00000519436 PRR3P79522 188 aaKnown RBP13.25□□□□□ -0.29
ARFGEF1-206ENST00000519436 LOC107984640A0A0U1RRK4 108 aa13.24□□□□□ -0.29
ARFGEF1-206ENST00000519436 APOMO95445 188 aa13.24□□□□□ -0.29
ARFGEF1-206ENST00000519436 CAMK2N2Q96S95 79 aa13.24□□□□□ -0.29
ARFGEF1-206ENST00000519436 PYGO1Q9Y3Y4 419 aa13.24□□□□□ -0.29
ARFGEF1-206ENST00000519436 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.23□□□□□ -0.29
ARFGEF1-206ENST00000519436 RAB5AP20339 215 aa13.23□□□□□ -0.29
ARFGEF1-206ENST00000519436 CLLU1Q5K131 121 aa13.23□□□□□ -0.29
ARFGEF1-206ENST00000519436 LAMTOR2Q9Y2Q5 125 aa13.23□□□□□ -0.29
ARFGEF1-206ENST00000519436 SPAG11BQ08648 103 aa13.22□□□□□ -0.29
ARFGEF1-206ENST00000519436 GAGE2BQ13066 116 aa13.22□□□□□ -0.29
ARFGEF1-206ENST00000519436 A0A1W2PNN7 141 aa13.21□□□□□ -0.29
ARFGEF1-206ENST00000519436 RNF151Q2KHN1 245 aa13.21□□□□□ -0.29
ARFGEF1-206ENST00000519436 OR10D4PQ8NGN7 298 aa13.21□□□□□ -0.29
ARFGEF1-206ENST00000519436 IGLV4-3A0A075B6K6 122 aa13.2□□□□□ -0.3
ARFGEF1-206ENST00000519436 LOC389332A0A1B0GUA5 103 aa13.2□□□□□ -0.3
ARFGEF1-206ENST00000519436 IFITM10A6NMD0 228 aa13.2□□□□□ -0.3
ARFGEF1-206ENST00000519436 IFI27P40305 119 aaPredicted RBP13.19□□□□□ -0.3
ARFGEF1-206ENST00000519436 A0A0J9YXV3 536 aa13.18□□□□□ -0.3
ARFGEF1-206ENST00000519436 F8WDY8 70 aa13.18□□□□□ -0.3
ARFGEF1-206ENST00000519436 Q8N8P6 123 aa13.18□□□□□ -0.3
ARFGEF1-206ENST00000519436 ORAOV1Q8WV07 137 aa13.18□□□□□ -0.3
ARFGEF1-206ENST00000519436 MAP1LC3AQ9H492 121 aa13.18□□□□□ -0.3
ARFGEF1-206ENST00000519436 MRPL35Q9NZE8 188 aaKnown RBP13.18□□□□□ -0.3
ARFGEF1-206ENST00000519436 LINC00242Q5T6M2 205 aa13.17□□□□□ -0.3
ARFGEF1-206ENST00000519436 A0A087WZ39 114 aa13.16□□□□□ -0.3
ARFGEF1-206ENST00000519436 ADCYAP1P18509 176 aa13.16□□□□□ -0.3
ARFGEF1-206ENST00000519436 IFITM2Q01629 132 aa13.16□□□□□ -0.3
ARFGEF1-206ENST00000519436 SRSF9Q13242 221 aaKnown RBP eCLIP13.16□□□□□ -0.3
ARFGEF1-206ENST00000519436 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
ARFGEF1-206ENST00000519436 IMMP2LQ96T52 175 aa13.16□□□□□ -0.3
ARFGEF1-206ENST00000519436 KIAA0087Q14695 138 aa13.15□□□□□ -0.3
ARFGEF1-206ENST00000519436 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
ARFGEF1-206ENST00000519436 Q6ZRP5 223 aa13.15□□□□□ -0.3
ARFGEF1-206ENST00000519436 TMEM141Q96I45 108 aa13.15□□□□□ -0.3
ARFGEF1-206ENST00000519436 C2orf66Q6UXQ4 117 aa13.14□□□□□ -0.31
ARFGEF1-206ENST00000519436 LINC01600Q96MT4 127 aa13.14□□□□□ -0.31
ARFGEF1-206ENST00000519436 TMEM218A2RU14 115 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 UBE2D1P51668 147 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 ZC2HC1BQ5TFG8 222 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 UQCC3Q6UW78 93 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 SPINK6Q6UWN8 80 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 UNQ6190/PRO20217Q6UXQ8 127 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 LINC00173Q6ZV60 143 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 AMELXQ99217 191 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 CYSLTR1Q9Y271 337 aa13.13□□□□□ -0.31
ARFGEF1-206ENST00000519436 TGIF2-C20orf24A0A0A6YYL0 155 aa13.12□□□□□ -0.31
ARFGEF1-206ENST00000519436 IGIPA6NJ69 53 aa13.12□□□□□ -0.31
ARFGEF1-206ENST00000519436 K7EMI3 77 aa13.12□□□□□ -0.31
ARFGEF1-206ENST00000519436 NDUFA1O15239 70 aa13.12□□□□□ -0.31
ARFGEF1-206ENST00000519436 RPL18AQ02543 176 aaKnown RBP13.12□□□□□ -0.31
ARFGEF1-206ENST00000519436 C6orf48Q9UBA6 75 aa13.12□□□□□ -0.31
ARFGEF1-206ENST00000519436 PLA2G2DQ9UNK4 145 aa13.12□□□□□ -0.31
ARFGEF1-206ENST00000519436 TLX1NBP0CAT3 122 aa13.11□□□□□ -0.31
ARFGEF1-206ENST00000519436 ORMDL2Q53FV1 153 aa13.11□□□□□ -0.31
ARFGEF1-206ENST00000519436 TEX43Q6ZNM6 134 aa13.11□□□□□ -0.31
ARFGEF1-206ENST00000519436 NPSP0C0P6 89 aa13.1□□□□□ -0.31
ARFGEF1-206ENST00000519436 LINC01561Q8N1V8 128 aa13.1□□□□□ -0.31
ARFGEF1-206ENST00000519436 CTDSP1Q9GZU7 261 aa13.1□□□□□ -0.31
ARFGEF1-206ENST00000519436 NXT2Q9NPJ8 142 aaKnown RBP13.09□□□□□ -0.31
ARFGEF1-206ENST00000519436 FAM19A3Q7Z5A8 133 aa13.08□□□□□ -0.32
ARFGEF1-206ENST00000519436 VCX2Q9H322 139 aa13.08□□□□□ -0.32
ARFGEF1-206ENST00000519436 KIAA1644Q3SXP7 199 aa13.07□□□□□ -0.32
ARFGEF1-206ENST00000519436 PHF5AQ7RTV0 110 aaKnown RBP13.07□□□□□ -0.32
ARFGEF1-206ENST00000519436 C2orf88Q9BSF0 95 aa13.07□□□□□ -0.32
ARFGEF1-206ENST00000519436 PSORS1C2Q9UIG4 136 aa13.07□□□□□ -0.32
ARFGEF1-206ENST00000519436 TRAV9-1A0A075B6T8 112 aa13.06□□□□□ -0.32
ARFGEF1-206ENST00000519436 KRTAP10-8P60410 259 aa13.06□□□□□ -0.32
ARFGEF1-206ENST00000519436 FAM168BA1KXE4 195 aa13.05□□□□□ -0.32
ARFGEF1-206ENST00000519436 C2orf82Q6UX34 121 aa13.05□□□□□ -0.32
ARFGEF1-206ENST00000519436 Q6ZN92 141 aa13.05□□□□□ -0.32
ARFGEF1-206ENST00000519436 SEC11CQ9BY50 192 aa13.05□□□□□ -0.32
ARFGEF1-206ENST00000519436 KRTAP7-1Q8IUC3 87 aa13.04□□□□□ -0.32
ARFGEF1-206ENST00000519436 UBR4Q5T4S7 5183 aa13.03□□□□□ -0.32
ARFGEF1-206ENST00000519436 TRBV30A0A0K0K1B3 111 aa13.03□□□□□ -0.32
ARFGEF1-206ENST00000519436 TOMM6Q96B49 74 aa13.03□□□□□ -0.32
ARFGEF1-206ENST00000519436 REG3GQ6UW15 175 aa13.02□□□□□ -0.33
ARFGEF1-206ENST00000519436 KRTAP11-1Q8IUC1 163 aa13.02□□□□□ -0.33
ARFGEF1-206ENST00000519436 TIMM17AQ99595 171 aa13.02□□□□□ -0.33
ARFGEF1-206ENST00000519436 G0S2P27469 103 aa13.01□□□□□ -0.33
ARFGEF1-206ENST00000519436 GAGE2EQ4V326 116 aa13.01□□□□□ -0.33
ARFGEF1-206ENST00000519436 GNB1LQ9BYB4 327 aa13.01□□□□□ -0.33
ARFGEF1-206ENST00000519436 GAGE2DQ9UEU5 116 aa13.01□□□□□ -0.33
ARFGEF1-206ENST00000519436 LINC01546A6NGU7 62 aa13□□□□□ -0.33
ARFGEF1-206ENST00000519436 MT-ND6P03923 174 aa13□□□□□ -0.33
ARFGEF1-206ENST00000519436 C10orf91Q5T1B1 145 aa13□□□□□ -0.33
ARFGEF1-206ENST00000519436 NDUFC2-KCTD14E9PQ53 114 aa12.99□□□□□ -0.33
ARFGEF1-206ENST00000519436 ODF1Q14990 250 aa12.99□□□□□ -0.33
ARFGEF1-206ENST00000519436 PAPPA-AS1Q5QFB9 102 aa12.99□□□□□ -0.33
ARFGEF1-206ENST00000519436 ALKBH7Q9BT30 221 aaPredicted RBP12.99□□□□□ -0.33
ARFGEF1-206ENST00000519436 C1orf137Q5JT78 98 aa12.98□□□□□ -0.33
ARFGEF1-206ENST00000519436 ERASQ7Z444 233 aa12.98□□□□□ -0.33
ARFGEF1-206ENST00000519436 CDKN2A-AS1Q9UH64 79 aa12.98□□□□□ -0.33
ARFGEF1-206ENST00000519436 HERVK_113P63121 156 aa12.97□□□□□ -0.33
ARFGEF1-206ENST00000519436 C9orf129Q5T035 196 aaKnown RBP12.97□□□□□ -0.33
ARFGEF1-206ENST00000519436 COMMD7Q86VX2 200 aa12.97□□□□□ -0.33
ARFGEF1-206ENST00000519436 PACRGQ96M98 296 aaPredicted RBP12.97□□□□□ -0.33
ARFGEF1-206ENST00000519436 S100PP25815 95 aa12.96□□□□□ -0.33
ARFGEF1-206ENST00000519436 SEC11AP67812 179 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 127.3 ms