RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 LINC00173Q6ZV60 143 aa3.61□□□□□ -1.83
CCDC6-203ENST00000518638 SCGB1C1Q8TD33 95 aa3.61□□□□□ -1.83
CCDC6-203ENST00000518638 ZNF471Q9BX82 626 aaPredicted RBP3.61□□□□□ -1.83
CCDC6-203ENST00000518638 TMEM167BQ9NRX6 74 aa3.61□□□□□ -1.83
CCDC6-203ENST00000518638 ZFP30Q9Y2G7 519 aa3.61□□□□□ -1.83
CCDC6-203ENST00000518638 ARL2-SNX15V9GYD0 113 aa3.61□□□□□ -1.83
CCDC6-203ENST00000518638 IGHV1-58A0A0C4DH39 117 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 M0R036 132 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 KRTAP1-4P0C5Y4 121 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 ARL14EPLP0DKL9 152 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 CRYGAP11844 174 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 CDC34P49427 236 aaPredicted RBP3.6□□□□□ -1.83
CCDC6-203ENST00000518638 SYCNQ0VAF6 134 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 Q1RN00 199 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
CCDC6-203ENST00000518638 AP1S3Q96PC3 154 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 V9GYH0 126 aa3.6□□□□□ -1.83
CCDC6-203ENST00000518638 GRIFINA4D1Z8 144 aa3.59□□□□□ -1.83
CCDC6-203ENST00000518638 SH2D1AO60880 128 aa3.59□□□□□ -1.83
CCDC6-203ENST00000518638 CXCL1P09341 107 aa3.59□□□□□ -1.83
CCDC6-203ENST00000518638 OR5AL1P0C617 328 aa3.59□□□□□ -1.83
CCDC6-203ENST00000518638 IL15RAQ13261 267 aa3.59□□□□□ -1.83
CCDC6-203ENST00000518638 C9orf116Q5BN46 136 aaPredicted RBP3.59□□□□□ -1.83
CCDC6-203ENST00000518638 Q86TA4 180 aa3.59□□□□□ -1.83
CCDC6-203ENST00000518638 NKX6-2Q9C056 277 aaPredicted RBP3.59□□□□□ -1.83
CCDC6-203ENST00000518638 IGLV4-69A0A075B6H9 119 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 A0A1W2PRE2 83 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 APOMO95445 188 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 PET100P0DJ07 73 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 SPANXN1Q5VSR9 72 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 AMMECR1LQ6DCA0 310 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 EIF5AL1Q6IS14 154 aaKnown RBP3.58□□□□□ -1.84
CCDC6-203ENST00000518638 MRPL52Q86TS9 123 aaKnown RBP3.58□□□□□ -1.84
CCDC6-203ENST00000518638 HIST1H2BAQ96A08 127 aa3.58□□□□□ -1.84
CCDC6-203ENST00000518638 IGHV3OR16-9A0A0B4J2B5 98 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 A0A0J9YXY3 114 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 PEX7O00628 323 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 CXorf1O96002 111 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 ZNF25P17030 456 aaPredicted RBP3.57□□□□□ -1.84
CCDC6-203ENST00000518638 GCHFRP30047 84 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 UBE2G1P62253 170 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 RGS21Q2M5E4 152 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 Q6ZVH6 145 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 FMC1Q96HJ9 113 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 TCEAL7Q9BRU2 100 aa3.57□□□□□ -1.84
CCDC6-203ENST00000518638 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
CCDC6-203ENST00000518638 TMSB15BA0A087X1C1 80 aa3.56□□□□□ -1.84
CCDC6-203ENST00000518638 M0QY20 66 aa3.56□□□□□ -1.84
CCDC6-203ENST00000518638 HMGB3O15347 200 aaKnown RBP3.56□□□□□ -1.84
CCDC6-203ENST00000518638 RPL12P30050 165 aaKnown RBP3.56□□□□□ -1.84
CCDC6-203ENST00000518638 PHF5AQ7RTV0 110 aaKnown RBP3.56□□□□□ -1.84
CCDC6-203ENST00000518638 OR5A1Q8NGJ0 315 aa3.56□□□□□ -1.84
CCDC6-203ENST00000518638 OR10AG1Q8NH19 301 aa3.56□□□□□ -1.84
CCDC6-203ENST00000518638 BTF3L4Q96K17 158 aa3.56□□□□□ -1.84
CCDC6-203ENST00000518638 HSPB11Q9Y547 144 aa3.56□□□□□ -1.84
CCDC6-203ENST00000518638 FAM240AA0A1B0GVK7 77 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 NCR2O95944 276 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 XCL1P47992 114 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 CRIP1P50238 77 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 CD164Q04900 197 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 SS18Q15532 418 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 COA6Q5JTJ3 125 aaKnown RBP3.55□□□□□ -1.84
CCDC6-203ENST00000518638 RASL11AQ6T310 242 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 NUP35Q8NFH5 326 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 TYMSOSQ8TAI1 123 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 CAMK2N2Q96S95 79 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 SDHCQ99643 169 aaPredicted RBP3.55□□□□□ -1.84
CCDC6-203ENST00000518638 RPP21Q9H633 154 aaKnown RBP3.55□□□□□ -1.84
CCDC6-203ENST00000518638 NIT2Q9NQR4 276 aa3.55□□□□□ -1.84
CCDC6-203ENST00000518638 C19orf71A6NCJ1 209 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.54□□□□□ -1.84
CCDC6-203ENST00000518638 CCL25O15444 150 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 MGPP08493 103 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 BCL2P10415 239 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 ESDP10768 282 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 NKX2-5P52952 324 aaPredicted RBP3.54□□□□□ -1.84
CCDC6-203ENST00000518638 UBE2BP63146 152 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 SERF2P84101 59 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 MEF2BQ02080 365 aaPredicted RBP3.54□□□□□ -1.84
CCDC6-203ENST00000518638 TMEM101Q96IK0 257 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 IMMP2LQ96T52 175 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 SEC22CQ9BRL7 303 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 CCDC32Q9BV29 185 aa3.54□□□□□ -1.84
CCDC6-203ENST00000518638 LINC00959A0A1B0GUT2 108 aa3.53□□□□□ -1.84
CCDC6-203ENST00000518638 CCDC160A6NGH7 325 aa3.53□□□□□ -1.84
CCDC6-203ENST00000518638 LYRM1O43325 122 aa3.53□□□□□ -1.84
CCDC6-203ENST00000518638 ZNF861PO60384 105 aa3.53□□□□□ -1.84
CCDC6-203ENST00000518638 UPK1BO75841 260 aa3.53□□□□□ -1.84
CCDC6-203ENST00000518638 LTAP01374 205 aa3.53□□□□□ -1.84
CCDC6-203ENST00000518638 TRGC1P0CF51 173 aa3.53□□□□□ -1.84
CCDC6-203ENST00000518638 LINC00526Q96FQ7 95 aa3.53□□□□□ -1.84
CCDC6-203ENST00000518638 PSMG3Q9BT73 122 aaPredicted RBP3.53□□□□□ -1.84
CCDC6-203ENST00000518638 NUPR1O60356 82 aa3.52□□□□□ -1.85
CCDC6-203ENST00000518638 APCSP02743 223 aa3.52□□□□□ -1.85
CCDC6-203ENST00000518638 IL7P13232 177 aa3.52□□□□□ -1.85
CCDC6-203ENST00000518638 ASB16-AS1Q495Z4 193 aa3.52□□□□□ -1.85
CCDC6-203ENST00000518638 CEND1Q8N111 149 aa3.52□□□□□ -1.85
CCDC6-203ENST00000518638 SMIM3Q9BZL3 60 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms