RNA–Protein interactions for RNA: ENST00000518263.5

CTNNA1-207, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-207ENST00000518263 TOP2AP11388 1531 aaKnown RBP1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 CLPSL1A2RUU4 121 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 XAF1Q6GPH4 301 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 C5orf38Q86SI9 138 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 CACNA1EQ15878 2313 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 MGAM2Q2M2H8 2515 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 MROH2AA6NES4 1674 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 MROH1Q8NDA8 1641 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 CELSR1Q9NYQ6 3014 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 LOC400499M0QZD8 3231 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 CRYBG3Q68DQ2 2970 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 CELSR2Q9HCU4 2923 aa1.46□□□□□ -2.17
CTNNA1-207ENST00000518263 AGLP35573 1532 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 NEXMIFQ5QGS0 1516 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 ARHGAP35Q9NRY4 1499 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 HCG22E2RYF7 251 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 MPC2O95563 127 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 S100A10P60903 97 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 CCL8P80075 99 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 CYP2G1PQ6ZSU1 146 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 SMIM5Q71RC9 77 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 TTC9CQ8N5M4 171 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 LINC00208Q96KT6 92 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 DPH3P1Q9H4G8 78 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 COL12A1Q99715 3063 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 ZNF609O15014 1411 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 SMG1Q96Q15 3661 aaKnown RBP1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 RYR3Q15413 4870 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 SPAG17Q6Q759 2223 aa1.46□□□□□ -2.18
CTNNA1-207ENST00000518263 ARHGAP5Q13017 1502 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 TECTAO75443 2155 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 CSPG4Q6UVK1 2322 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 PAPPAQ13219 1627 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 SCN11AQ9UI33 1791 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 TENM1Q9UKZ4 2725 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 DOCK11Q5JSL3 2073 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 TRAV13-2A0A0B4J235 113 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 TEX49A0A1B0GTD5 131 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 RBAKDNA6NC62 111 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 M0R143 59 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 SCAPERQ9BY12 1400 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 DNAH14Q0VDD8 3507 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 LMTK2Q8IWU2 1503 aa1.45□□□□□ -2.18
CTNNA1-207ENST00000518263 NBASA2RRP1 2371 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 FLG2Q5D862 2391 aaPredicted RBP1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 ABCA9Q8IUA7 1624 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 ITPR2Q14571 2701 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 FAM24AA6NFZ4 105 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 COMMD6Q7Z4G1 85 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 C20orf197Q8N268 126 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 AQP10Q96PS8 301 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 CCL19Q99731 98 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 LINC00474Q9P2X8 69 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 PLCH1Q4KWH8 1693 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 MED13LQ71F56 2210 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 UGGT2Q9NYU1 1516 aa1.44□□□□□ -2.18
CTNNA1-207ENST00000518263 NKTRP30414 1462 aaKnown RBP1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 NCOA2Q15596 1464 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 ITSN1Q15811 1721 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 UBE2L5PA0A1B0GUS4 154 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 SIX6O95475 246 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 CCL3L1P16619 93 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 EFNA4P52798 201 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 PKIAP61925 76 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 UBE2L3P68036 154 aaKnown RBP1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 Q6ZQY7 126 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 ZNF818PQ6ZRF7 136 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 DEFB119Q8N690 84 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 SPTBN1Q01082 2364 aaKnown RBP1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 ASCC3Q8N3C0 2202 aaKnown RBP1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 KIAA1551Q9HCM1 1747 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 TRIOO75962 3097 aa1.43□□□□□ -2.18
CTNNA1-207ENST00000518263 RGPD3A6NKT7 1758 aaPredicted RBP1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 RGPD4Q7Z3J3 1758 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 SLIT1O75093 1534 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 ABCA6Q8N139 1617 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 A0A087WTM6 91 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 PIGBOS1A0A0B4J2F0 54 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 TMEM262E9PQX1 116 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 LYNX1P0DP58 116 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 GNG2P59768 71 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 Q86TA4 180 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 SNHG12Q9BXW3 62 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 FAIMQ9NVQ4 179 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 LINC00312Q9Y6C7 94 aa1.42□□□□□ -2.18
CTNNA1-207ENST00000518263 FREM2Q5SZK8 3169 aa1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 CENPEQ02224 2701 aa1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 TENM2Q9NT68 2774 aa1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 FXYD1O00168 92 aa1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 NCR3O14931 201 aa1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 SSSCA1O60232 199 aa1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 ATP5EP56381 51 aaPredicted RBP1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 ELOF1P60002 83 aaKnown RBP1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 ZNF56Q15929 161 aa1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 TSLPQ969D9 159 aa1.41□□□□□ -2.18
CTNNA1-207ENST00000518263 PPIP5K1Q6PFW1 1433 aa1.4□□□□□ -2.18
CTNNA1-207ENST00000518263 EPPK1P58107 5090 aaKnown RBP1.4□□□□□ -2.18
CTNNA1-207ENST00000518263 LRRC37A2A6NM11 1700 aa1.4□□□□□ -2.18
CTNNA1-207ENST00000518263 NIPBLQ6KC79 2804 aaeCLIP1.4□□□□□ -2.18
CTNNA1-207ENST00000518263 CHD7Q9P2D1 2997 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms