RNA–Protein interactions for RNA: ENST00000518149.5

NKX2-1-203, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NKX2-1, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-203ENST00000518149 A0A0U1RRA0 63 aa13.59□□□□□ -0.23
NKX2-1-203ENST00000518149 KNCNA6PVL3 124 aa13.59□□□□□ -0.23
NKX2-1-203ENST00000518149 TIRAPP58753 221 aa13.59□□□□□ -0.23
NKX2-1-203ENST00000518149 Q8N2B8 174 aa13.59□□□□□ -0.23
NKX2-1-203ENST00000518149 IGLV5-45A0A087WSX0 123 aa13.58□□□□□ -0.24
NKX2-1-203ENST00000518149 BEAN1Q3B7T3 259 aa13.58□□□□□ -0.24
NKX2-1-203ENST00000518149 C5orf38Q86SI9 138 aa13.58□□□□□ -0.24
NKX2-1-203ENST00000518149 ZNF625Q96I27 306 aaPredicted RBP13.58□□□□□ -0.24
NKX2-1-203ENST00000518149 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
NKX2-1-203ENST00000518149 RBMY1A1P0DJD3 496 aaKnown RBP13.57□□□□□ -0.24
NKX2-1-203ENST00000518149 RBMY1CP0DJD4 496 aa13.57□□□□□ -0.24
NKX2-1-203ENST00000518149 SYNJ2BPP57105 145 aa13.57□□□□□ -0.24
NKX2-1-203ENST00000518149 RBMY1FQ15415 496 aaKnown RBP13.57□□□□□ -0.24
NKX2-1-203ENST00000518149 COPS9Q8WXC6 57 aa13.57□□□□□ -0.24
NKX2-1-203ENST00000518149 SOSTDC1Q6X4U4 206 aa13.56□□□□□ -0.24
NKX2-1-203ENST00000518149 Q6ZSN1 163 aa13.56□□□□□ -0.24
NKX2-1-203ENST00000518149 NACAE9PAV3 2078 aa13.56□□□□□ -0.24
NKX2-1-203ENST00000518149 COX7CP15954 63 aa13.56□□□□□ -0.24
NKX2-1-203ENST00000518149 KLK5Q9Y337 293 aaPredicted RBP13.56□□□□□ -0.24
NKX2-1-203ENST00000518149 CSDC2Q9Y534 153 aaKnown RBP13.56□□□□□ -0.24
NKX2-1-203ENST00000518149 IGHV3-38A0A0C4DH36 116 aa13.55□□□□□ -0.24
NKX2-1-203ENST00000518149 LOC107984640A0A0U1RRK4 108 aa13.55□□□□□ -0.24
NKX2-1-203ENST00000518149 TMEM89A2RUT3 159 aa13.55□□□□□ -0.24
NKX2-1-203ENST00000518149 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
NKX2-1-203ENST00000518149 ATRQ13535 2644 aa13.55□□□□□ -0.24
NKX2-1-203ENST00000518149 COX6A2Q02221 97 aa13.55□□□□□ -0.24
NKX2-1-203ENST00000518149 RNF152Q8N8N0 203 aa13.55□□□□□ -0.24
NKX2-1-203ENST00000518149 ZNF702PQ9H963 129 aa13.55□□□□□ -0.24
NKX2-1-203ENST00000518149 IGLV5-39A0A0G2JS06 123 aa13.54□□□□□ -0.24
NKX2-1-203ENST00000518149 INAFM2P0DMQ5 153 aa13.54□□□□□ -0.24
NKX2-1-203ENST00000518149 FAM222AQ5U5X8 452 aa13.54□□□□□ -0.24
NKX2-1-203ENST00000518149 GAGE2AQ6NT46 116 aa13.54□□□□□ -0.24
NKX2-1-203ENST00000518149 HILS1P60008 231 aa13.53□□□□□ -0.24
NKX2-1-203ENST00000518149 HIST2H2BDQ6DRA6 164 aa13.53□□□□□ -0.24
NKX2-1-203ENST00000518149 J3KT08 172 aa13.53□□□□□ -0.24
NKX2-1-203ENST00000518149 DGAT2L7PQ6IED9 249 aa13.53□□□□□ -0.24
NKX2-1-203ENST00000518149 FAM218AQ96MZ4 157 aa13.53□□□□□ -0.24
NKX2-1-203ENST00000518149 TMEM86BQ8N661 226 aa13.52□□□□□ -0.24
NKX2-1-203ENST00000518149 SORL1Q92673 2214 aa13.52□□□□□ -0.25
NKX2-1-203ENST00000518149 C2orf48Q96LS8 159 aa13.52□□□□□ -0.25
NKX2-1-203ENST00000518149 A0A1B0GX51 115 aa13.51□□□□□ -0.25
NKX2-1-203ENST00000518149 TENM1Q9UKZ4 2725 aa13.5□□□□□ -0.25
NKX2-1-203ENST00000518149 IGHV3OR16-12A0A075B7B8 117 aa13.5□□□□□ -0.25
NKX2-1-203ENST00000518149 PRM2P04554 102 aa13.5□□□□□ -0.25
NKX2-1-203ENST00000518149 ATOX1O00244 68 aa13.5□□□□□ -0.25
NKX2-1-203ENST00000518149 CRYGAP11844 174 aa13.5□□□□□ -0.25
NKX2-1-203ENST00000518149 HOXD3P31249 432 aaPredicted RBP13.5□□□□□ -0.25
NKX2-1-203ENST00000518149 HIST1H4AP62805 103 aaKnown RBP13.49□□□□□ -0.25
NKX2-1-203ENST00000518149 LINC00242Q5T6M2 205 aa13.49□□□□□ -0.25
NKX2-1-203ENST00000518149 RNASE1P07998 156 aaKnown RBP13.49□□□□□ -0.25
NKX2-1-203ENST00000518149 PRIMA1Q86XR5 153 aa13.49□□□□□ -0.25
NKX2-1-203ENST00000518149 MALP21145 153 aa13.48□□□□□ -0.25
NKX2-1-203ENST00000518149 FBN1P35555 2871 aaKnown RBP13.48□□□□□ -0.25
NKX2-1-203ENST00000518149 SMIM1B2RUZ4 78 aa13.48□□□□□ -0.25
NKX2-1-203ENST00000518149 ZNF415Q09FC8 603 aa13.48□□□□□ -0.25
NKX2-1-203ENST00000518149 Q9HAA7 133 aa13.48□□□□□ -0.25
NKX2-1-203ENST00000518149 IGHV3-53P01767 116 aa13.47□□□□□ -0.25
NKX2-1-203ENST00000518149 PIK3CD-AS1Q5SR53 167 aa13.47□□□□□ -0.25
NKX2-1-203ENST00000518149 UBE2E2Q96LR5 201 aa13.47□□□□□ -0.25
NKX2-1-203ENST00000518149 FAM19A5Q7Z5A7 132 aaPredicted RBP13.46□□□□□ -0.25
NKX2-1-203ENST00000518149 C5orf47Q569G3 176 aa13.46□□□□□ -0.26
NKX2-1-203ENST00000518149 hADV29S1A0JD25 119 aa13.45□□□□□ -0.26
NKX2-1-203ENST00000518149 C11orf44Q8N8P7 122 aa13.44□□□□□ -0.26
NKX2-1-203ENST00000518149 DNAL4O96015 105 aa13.43□□□□□ -0.26
NKX2-1-203ENST00000518149 TRAV13-1A0A0B4J241 112 aa13.43□□□□□ -0.26
NKX2-1-203ENST00000518149 SMIM9A6NGZ8 99 aa13.43□□□□□ -0.26
NKX2-1-203ENST00000518149 RPL28P46779 137 aaKnown RBP13.43□□□□□ -0.26
NKX2-1-203ENST00000518149 FAM19A3Q7Z5A8 133 aa13.43□□□□□ -0.26
NKX2-1-203ENST00000518149 TRAV13-2A0A0B4J235 113 aa13.42□□□□□ -0.26
NKX2-1-203ENST00000518149 RPS28P62857 69 aaKnown RBP13.42□□□□□ -0.26
NKX2-1-203ENST00000518149 RPL18AQ02543 176 aaKnown RBP13.42□□□□□ -0.26
NKX2-1-203ENST00000518149 LINC01006Q8NI28 216 aa13.42□□□□□ -0.26
NKX2-1-203ENST00000518149 DEFB131AP59861 70 aa13.42□□□□□ -0.26
NKX2-1-203ENST00000518149 PF4P02776 101 aa13.41□□□□□ -0.26
NKX2-1-203ENST00000518149 DEFB136Q30KP8 78 aa13.41□□□□□ -0.26
NKX2-1-203ENST00000518149 RBMY1BA6NDE4 496 aaKnown RBP13.41□□□□□ -0.26
NKX2-1-203ENST00000518149 RBMY1EA6NEQ0 496 aaKnown RBP13.41□□□□□ -0.26
NKX2-1-203ENST00000518149 CRPP02741 224 aa13.41□□□□□ -0.26
NKX2-1-203ENST00000518149 RBMY1DP0C7P1 496 aaKnown RBP13.41□□□□□ -0.26
NKX2-1-203ENST00000518149 SLURP1P55000 103 aa13.41□□□□□ -0.26
NKX2-1-203ENST00000518149 TRRAPQ9Y4A5 3859 aa13.41□□□□□ -0.26
NKX2-1-203ENST00000518149 OVOL2Q9BRP0 275 aa13.4□□□□□ -0.26
NKX2-1-203ENST00000518149 WNK1Q9H4A3 2382 aa13.4□□□□□ -0.26
NKX2-1-203ENST00000518149 CYSTM1Q9H1C7 97 aa13.39□□□□□ -0.27
NKX2-1-203ENST00000518149 F5H768 121 aa13.39□□□□□ -0.27
NKX2-1-203ENST00000518149 RS1O15537 224 aa13.39□□□□□ -0.27
NKX2-1-203ENST00000518149 KHDC1LQ5JSQ8 128 aa13.39□□□□□ -0.27
NKX2-1-203ENST00000518149 C18orf65Q6ZTR6 163 aa13.39□□□□□ -0.27
NKX2-1-203ENST00000518149 IGKV3D-7A0A0C4DH55 119 aa13.38□□□□□ -0.27
NKX2-1-203ENST00000518149 C11orf72Q8NBR9 251 aa13.38□□□□□ -0.27
NKX2-1-203ENST00000518149 C14orf132Q9NPU4 83 aa13.38□□□□□ -0.27
NKX2-1-203ENST00000518149 A8MTW9 85 aa13.38□□□□□ -0.27
NKX2-1-203ENST00000518149 Q6JHZ5 121 aa13.38□□□□□ -0.27
NKX2-1-203ENST00000518149 LINC00337Q8N6G1 96 aa13.37□□□□□ -0.27
NKX2-1-203ENST00000518149 VWFP04275 2813 aa13.37□□□□□ -0.27
NKX2-1-203ENST00000518149 C9orf129Q5T035 196 aaKnown RBP13.37□□□□□ -0.27
NKX2-1-203ENST00000518149 OR13C6PQ8NH95 151 aa13.37□□□□□ -0.27
NKX2-1-203ENST00000518149 A0A087WYN8 130 aa13.36□□□□□ -0.27
NKX2-1-203ENST00000518149 SERP2Q8N6R1 65 aa13.35□□□□□ -0.27
NKX2-1-203ENST00000518149 TMEM258P61165 79 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms