RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 SMLR1H3BR10 107 aa5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 NUPR1O60356 82 aa5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 TAGLN2P37802 199 aaKnown RBP5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 OCC1Q8TAD7 63 aa5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 TYMSOSQ8TAI1 123 aa5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 TIMM21Q9BVV7 248 aa5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 TMEM191AQ9H0A3 160 aa5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 CDIP1Q9H305 208 aa5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 C6orf48Q9UBA6 75 aa5.37□□□□□ -1.55
LINCR-0001-201ENST00000517732 TGIF2-C20orf24A0A0A6YYL0 155 aa5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 A0A1B0GUT8 65 aa5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 HMSDA8MTL9 139 aa5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 K7EN84 100 aa5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 PPP1R2P9O14990 202 aa5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 CRYGAP11844 174 aa5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 SUMO2P61956 95 aaKnown RBP5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 C10orf25Q5T742 122 aa5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 UNQ6190/PRO20217Q6UXQ8 127 aa5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 PACRGQ96M98 296 aaPredicted RBP5.36□□□□□ -1.55
LINCR-0001-201ENST00000517732 TRBV30A0A0K0K1B3 111 aa5.35□□□□□ -1.55
LINCR-0001-201ENST00000517732 TCAPO15273 167 aa5.35□□□□□ -1.55
LINCR-0001-201ENST00000517732 RAB4AP20338 218 aa5.35□□□□□ -1.55
LINCR-0001-201ENST00000517732 CT83Q5H943 113 aa5.35□□□□□ -1.55
LINCR-0001-201ENST00000517732 FAM231DQ6ZW35 169 aa5.35□□□□□ -1.55
LINCR-0001-201ENST00000517732 AMN1Q8IY45 258 aa5.35□□□□□ -1.55
LINCR-0001-201ENST00000517732 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
LINCR-0001-201ENST00000517732 IGHV3OR16-9A0A0B4J2B5 98 aa5.34□□□□□ -1.55
LINCR-0001-201ENST00000517732 IFITM10A6NMD0 228 aa5.34□□□□□ -1.55
LINCR-0001-201ENST00000517732 NDUFC2-KCTD14E9PQ53 114 aa5.34□□□□□ -1.55
LINCR-0001-201ENST00000517732 RPL28P46779 137 aaKnown RBP5.34□□□□□ -1.55
LINCR-0001-201ENST00000517732 HBBP68871 147 aa5.34□□□□□ -1.55
LINCR-0001-201ENST00000517732 LBHQ53QV2 105 aaPredicted RBP5.34□□□□□ -1.55
LINCR-0001-201ENST00000517732 HIGD1CA8MV81 97 aa5.33□□□□□ -1.56
LINCR-0001-201ENST00000517732 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
LINCR-0001-201ENST00000517732 SMKR1H3BMG3 65 aa5.33□□□□□ -1.56
LINCR-0001-201ENST00000517732 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
LINCR-0001-201ENST00000517732 CTDSP1Q9GZU7 261 aa5.33□□□□□ -1.56
LINCR-0001-201ENST00000517732 SPANXA1Q9NS26 97 aa5.33□□□□□ -1.56
LINCR-0001-201ENST00000517732 A0A087X002 238 aa5.32□□□□□ -1.56
LINCR-0001-201ENST00000517732 H3BS24 57 aa5.32□□□□□ -1.56
LINCR-0001-201ENST00000517732 RIGQ13278 110 aa5.32□□□□□ -1.56
LINCR-0001-201ENST00000517732 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
LINCR-0001-201ENST00000517732 C9orf129Q5T035 196 aaKnown RBP5.32□□□□□ -1.56
LINCR-0001-201ENST00000517732 RETNLBQ9BQ08 111 aa5.32□□□□□ -1.56
LINCR-0001-201ENST00000517732 PRSS2P07478 247 aa5.31□□□□□ -1.56
LINCR-0001-201ENST00000517732 RPL39P62891 51 aaKnown RBP5.31□□□□□ -1.56
LINCR-0001-201ENST00000517732 MRPS36P82909 103 aaKnown RBP5.31□□□□□ -1.56
LINCR-0001-201ENST00000517732 NRACQ8N912 160 aa5.31□□□□□ -1.56
LINCR-0001-201ENST00000517732 LINC00304Q8N9R0 145 aa5.31□□□□□ -1.56
LINCR-0001-201ENST00000517732 IGLV7-46A0A075B6I9 117 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 TMEM250H0YL14 139 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 CEBPGP53567 150 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 KIAA0087Q14695 138 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 RGS21Q2M5E4 152 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 C2orf82Q6UX34 121 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 LINC00173Q6ZV60 143 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 C20orf78Q9BR46 151 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 C22orf24Q9Y442 160 aa5.3□□□□□ -1.56
LINCR-0001-201ENST00000517732 LINC00862A6NCI5 91 aa5.29□□□□□ -1.56
LINCR-0001-201ENST00000517732 ZNF727A8MUV8 499 aa5.29□□□□□ -1.56
LINCR-0001-201ENST00000517732 BCE1O60756 84 aa5.29□□□□□ -1.56
LINCR-0001-201ENST00000517732 IFI27P40305 119 aaPredicted RBP5.29□□□□□ -1.56
LINCR-0001-201ENST00000517732 LINC01547P58512 204 aaPredicted RBP5.29□□□□□ -1.56
LINCR-0001-201ENST00000517732 CKS1BP61024 79 aa5.29□□□□□ -1.56
LINCR-0001-201ENST00000517732 KRTAP4-12Q9BQ66 201 aa5.29□□□□□ -1.56
LINCR-0001-201ENST00000517732 CKS2P33552 79 aa5.28□□□□□ -1.56
LINCR-0001-201ENST00000517732 RPL32P62910 135 aaKnown RBP5.28□□□□□ -1.56
LINCR-0001-201ENST00000517732 MRPL55Q7Z7F7 128 aaKnown RBP5.28□□□□□ -1.56
LINCR-0001-201ENST00000517732 LINC01561Q8N1V8 128 aa5.28□□□□□ -1.56
LINCR-0001-201ENST00000517732 LINC00469Q8N7U9 141 aa5.28□□□□□ -1.56
LINCR-0001-201ENST00000517732 SMIM2Q9BVW6 85 aa5.28□□□□□ -1.56
LINCR-0001-201ENST00000517732 OSTCQ9NRP0 149 aa5.28□□□□□ -1.56
LINCR-0001-201ENST00000517732 TP73-AS1Q9UF72 201 aa5.28□□□□□ -1.56
LINCR-0001-201ENST00000517732 IGKV2D-26A0A0A0MRZ7 120 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 UBE2AP49459 152 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 CTAG1AP78358 180 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 FAM229BQ4G0N7 80 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 MRPL51Q4U2R6 128 aaKnown RBP5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 FAM104BQ5XKR9 115 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 SMIM7Q9BQ49 75 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 C2orf88Q9BSF0 95 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 XAGE1AQ9HD64 81 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 TOMM7Q9P0U1 55 aa5.27□□□□□ -1.57
LINCR-0001-201ENST00000517732 TRBV24-1A0A075B6N3 115 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 TNFRSF6BO95407 300 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 RAB5AP20339 215 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 C6orf226Q5I0X4 101 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 LINC00242Q5T6M2 205 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 Q6ZN92 141 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 TEX43Q6ZNM6 134 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 SLC51BQ86UW2 128 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 FAM104AQ969W3 186 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 BATF3Q9NR55 127 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 CRCT1Q9UGL9 99 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 NAT8BQ9UHF3 227 aa5.26□□□□□ -1.57
LINCR-0001-201ENST00000517732 A0A1B0GW15 77 aa5.25□□□□□ -1.57
LINCR-0001-201ENST00000517732 KRTAP13-2Q52LG2 175 aa5.25□□□□□ -1.57
LINCR-0001-201ENST00000517732 LINC01551Q86U37 167 aa5.25□□□□□ -1.57
LINCR-0001-201ENST00000517732 Q8IZM0 81 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms