RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SS18Q15532 418 aa6.5□□□□□ -1.37
CLN8-202ENST00000517514 CD164L2Q6UWJ8 174 aa6.5□□□□□ -1.37
CLN8-202ENST00000517514 IFI27L1Q96BM0 104 aa6.5□□□□□ -1.37
CLN8-202ENST00000517514 RMI2Q96E14 147 aa6.5□□□□□ -1.37
CLN8-202ENST00000517514 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
CLN8-202ENST00000517514 LEPROTL1O95214 131 aa6.49□□□□□ -1.37
CLN8-202ENST00000517514 FABP4P15090 132 aa6.49□□□□□ -1.37
CLN8-202ENST00000517514 Q6ZN92 141 aa6.49□□□□□ -1.37
CLN8-202ENST00000517514 SPATA12Q7Z6I5 190 aa6.49□□□□□ -1.37
CLN8-202ENST00000517514 HIST3H2BBQ8N257 126 aa6.49□□□□□ -1.37
CLN8-202ENST00000517514 C15orf56Q8N910 161 aa6.49□□□□□ -1.37
CLN8-202ENST00000517514 COX11Q9Y6N1 276 aa6.49□□□□□ -1.37
CLN8-202ENST00000517514 USP17L23D6RBM5 183 aa6.48□□□□□ -1.37
CLN8-202ENST00000517514 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
CLN8-202ENST00000517514 PAPPA-AS1Q5QFB9 102 aa6.48□□□□□ -1.37
CLN8-202ENST00000517514 LINC00336Q6ZUF6 198 aa6.48□□□□□ -1.37
CLN8-202ENST00000517514 C5orf38Q86SI9 138 aa6.48□□□□□ -1.37
CLN8-202ENST00000517514 NTN5Q8WTR8 489 aaPredicted RBP6.48□□□□□ -1.37
CLN8-202ENST00000517514 IGLV5-45A0A087WSX0 123 aa6.47□□□□□ -1.37
CLN8-202ENST00000517514 TRAV12-1A0A0B4J245 112 aa6.47□□□□□ -1.37
CLN8-202ENST00000517514 C5orf52A6NGY3 159 aa6.47□□□□□ -1.37
CLN8-202ENST00000517514 PSCAO43653 123 aa6.47□□□□□ -1.37
CLN8-202ENST00000517514 IGLC3P0DOY3 106 aa6.47□□□□□ -1.37
CLN8-202ENST00000517514 KRTAP10-2P60368 255 aa6.47□□□□□ -1.37
CLN8-202ENST00000517514 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
CLN8-202ENST00000517514 APOBP04114 4563 aaKnown RBP6.47□□□□□ -1.37
CLN8-202ENST00000517514 A0A087WZ39 114 aa6.46□□□□□ -1.38
CLN8-202ENST00000517514 TINCRA0A1B0GVN0 87 aa6.46□□□□□ -1.38
CLN8-202ENST00000517514 C11orf86A6NJI1 115 aa6.46□□□□□ -1.38
CLN8-202ENST00000517514 SLPIP03973 132 aa6.46□□□□□ -1.38
CLN8-202ENST00000517514 PRSS1P07477 247 aa6.46□□□□□ -1.38
CLN8-202ENST00000517514 SNRPEP62304 92 aaKnown RBP6.46□□□□□ -1.38
CLN8-202ENST00000517514 ODF1Q14990 250 aa6.46□□□□□ -1.38
CLN8-202ENST00000517514 PACRGQ96M98 296 aaPredicted RBP6.46□□□□□ -1.38
CLN8-202ENST00000517514 CDKN2A-AS1Q9UH64 79 aa6.46□□□□□ -1.38
CLN8-202ENST00000517514 COX7A2LO14548 114 aa6.45□□□□□ -1.38
CLN8-202ENST00000517514 C3orf79P0CE67 100 aa6.45□□□□□ -1.38
CLN8-202ENST00000517514 ZNF22P17026 224 aaPredicted RBP6.45□□□□□ -1.38
CLN8-202ENST00000517514 Q8N814 137 aa6.45□□□□□ -1.38
CLN8-202ENST00000517514 HIST1H2BLQ99880 126 aa6.45□□□□□ -1.38
CLN8-202ENST00000517514 MRPL35Q9NZE8 188 aaKnown RBP6.45□□□□□ -1.38
CLN8-202ENST00000517514 HSPB8Q9UJY1 196 aa6.45□□□□□ -1.38
CLN8-202ENST00000517514 GVQW2A0A096LPI5 108 aaPredicted RBP6.44□□□□□ -1.38
CLN8-202ENST00000517514 SYS1-DBNDD2H3BUS1 97 aa6.44□□□□□ -1.38
CLN8-202ENST00000517514 KIAA0087Q14695 138 aa6.44□□□□□ -1.38
CLN8-202ENST00000517514 HIGD2BQ4VC39 106 aa6.44□□□□□ -1.38
CLN8-202ENST00000517514 LINC00526Q96FQ7 95 aa6.44□□□□□ -1.38
CLN8-202ENST00000517514 PMCHL2Q9BQD1 86 aa6.44□□□□□ -1.38
CLN8-202ENST00000517514 CHAC1Q9BUX1 264 aa6.44□□□□□ -1.38
CLN8-202ENST00000517514 CHTOPQ9Y3Y2 248 aaKnown RBP6.44□□□□□ -1.38
CLN8-202ENST00000517514 IGHV3-64A0A075B6Q5 118 aa6.43□□□□□ -1.38
CLN8-202ENST00000517514 IGHV1-58A0A0C4DH39 117 aa6.43□□□□□ -1.38
CLN8-202ENST00000517514 SMIM1B2RUZ4 78 aa6.43□□□□□ -1.38
CLN8-202ENST00000517514 F8VRH5 84 aa6.43□□□□□ -1.38
CLN8-202ENST00000517514 H0Y8G0 127 aa6.43□□□□□ -1.38
CLN8-202ENST00000517514 HERVK_113P63121 156 aa6.43□□□□□ -1.38
CLN8-202ENST00000517514 LINC01561Q8N1V8 128 aa6.43□□□□□ -1.38
CLN8-202ENST00000517514 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.42□□□□□ -1.38
CLN8-202ENST00000517514 S100A6P06703 90 aa6.42□□□□□ -1.38
CLN8-202ENST00000517514 SEC11AP67812 179 aa6.42□□□□□ -1.38
CLN8-202ENST00000517514 LINC01545Q5VT33 79 aa6.42□□□□□ -1.38
CLN8-202ENST00000517514 LINC00469Q8N7U9 141 aa6.42□□□□□ -1.38
CLN8-202ENST00000517514 MAP1LC3CQ9BXW4 147 aa6.42□□□□□ -1.38
CLN8-202ENST00000517514 GEMIN7Q9H840 131 aaKnown RBP6.42□□□□□ -1.38
CLN8-202ENST00000517514 TMA7Q9Y2S6 64 aaKnown RBP6.42□□□□□ -1.38
CLN8-202ENST00000517514 SPINK8P0C7L1 97 aa6.41□□□□□ -1.38
CLN8-202ENST00000517514 BIRC6Q9NR09 4857 aa6.41□□□□□ -1.38
CLN8-202ENST00000517514 IGLV5-39A0A0G2JS06 123 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 hDV102S1A0JD36 115 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 TMEM223A0PJW6 202 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 MALP21145 153 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 KRTDAPP60985 99 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 CNBPP62633 177 aaKnown RBP6.4□□□□□ -1.38
CLN8-202ENST00000517514 LINC01620Q4KN68 170 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 CFAP161Q6P656 301 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 PET117Q6UWS5 81 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 ORAOV1Q8WV07 137 aa6.4□□□□□ -1.38
CLN8-202ENST00000517514 SPAG11BQ08648 103 aa6.39□□□□□ -1.39
CLN8-202ENST00000517514 C14orf177Q52M58 125 aa6.39□□□□□ -1.39
CLN8-202ENST00000517514 C10orf25Q5T742 122 aa6.39□□□□□ -1.39
CLN8-202ENST00000517514 OR10D4PQ8NGN7 298 aa6.39□□□□□ -1.39
CLN8-202ENST00000517514 HSPG2P98160 4391 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 EREGO14944 169 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 DPM2O94777 84 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 APOMO95445 188 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 S100A2P29034 98 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 KRTAP10-1P60331 282 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 TMEM170BQ5T4T1 132 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 C2orf82Q6UX34 121 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 Q6ZRU5 148 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 PGPEP1Q9NXJ5 209 aa6.38□□□□□ -1.39
CLN8-202ENST00000517514 RYR1P21817 5038 aa6.37□□□□□ -1.39
CLN8-202ENST00000517514 IGLV5-52A0A0A0MRZ9 124 aa6.37□□□□□ -1.39
CLN8-202ENST00000517514 IGKCP01834 107 aa6.37□□□□□ -1.39
CLN8-202ENST00000517514 UNQ6190/PRO20217Q6UXQ8 127 aa6.37□□□□□ -1.39
CLN8-202ENST00000517514 Q8IZM0 81 aa6.37□□□□□ -1.39
CLN8-202ENST00000517514 C9orf163Q8N9P6 203 aa6.37□□□□□ -1.39
CLN8-202ENST00000517514 C2orf48Q96LS8 159 aa6.37□□□□□ -1.39
CLN8-202ENST00000517514 H3BRM9 83 aa6.36□□□□□ -1.39
CLN8-202ENST00000517514 ZNF561-AS1K7EIQ3 104 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms