RNA–Protein interactions for RNA: ENST00000517354.5

CPNE3-201, Transcript of copine 3, humanhuman

TSL 4

Gene CPNE3, Length 566 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-201ENST00000517354 CHCHD1Q96BP2 118 aaKnown RBP2.52□□□□□ -2.01
CPNE3-201ENST00000517354 LINC00526Q96FQ7 95 aa2.52□□□□□ -2.01
CPNE3-201ENST00000517354 SERP1Q9Y6X1 66 aa2.52□□□□□ -2.01
CPNE3-201ENST00000517354 CUBNO60494 3623 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 A0A1W2PRS3 328 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 A6NN06 94 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 C17orf112F2Z3M2 114 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 PDE6HQ13956 83 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 C10orf55Q5SWW7 151 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 LINC01545Q5VT33 79 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 OR5AS1Q8N127 324 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 C10orf111Q8N326 155 aa2.51□□□□□ -2.01
CPNE3-201ENST00000517354 NBEAL2Q6ZNJ1 2754 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 SPTBP11277 2137 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.5□□□□□ -2.01
CPNE3-201ENST00000517354 C3orf85A0A1B0GTC6 90 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 APOC4-APOC2K7ER74 178 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 TRACP01848 142 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 APOC2P02655 101 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 TFF3Q07654 80 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 CIRBPQ14011 172 aaKnown RBP2.5□□□□□ -2.01
CPNE3-201ENST00000517354 PCOTHQ58A44 107 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 OR5AK2Q8NH90 309 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 LCN9Q8WX39 176 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 COPS9Q8WXC6 57 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 POP5Q969H6 163 aaKnown RBP2.5□□□□□ -2.01
CPNE3-201ENST00000517354 ZNF625Q96I27 306 aaPredicted RBP2.5□□□□□ -2.01
CPNE3-201ENST00000517354 DSCR8Q96T75 97 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 NABP2Q9BQ15 211 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 VAMP8Q9BV40 100 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 SPANXDQ9BXN6 97 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 SAR1AQ9NR31 198 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 NOP16Q9Y3C1 178 aaKnown RBP2.5□□□□□ -2.01
CPNE3-201ENST00000517354 KIAA1549Q9HCM3 1950 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 HRNRQ86YZ3 2850 aaPredicted RBP2.5□□□□□ -2.01
CPNE3-201ENST00000517354 ANK2Q01484 3957 aa2.5□□□□□ -2.01
CPNE3-201ENST00000517354 IGKV2D-26A0A0A0MRZ7 120 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 LOC107986453A0A1B0GWG9 222 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 M0R233 179 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 M0R2P5 195 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 MRPS14O60783 128 aaKnown RBP2.49□□□□□ -2.01
CPNE3-201ENST00000517354 IGLV1-51P01701 117 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 RBP4P02753 201 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 MT-ATP8P03928 68 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 DCDP81605 110 aaKnown RBP2.49□□□□□ -2.01
CPNE3-201ENST00000517354 MRPS36P82909 103 aaKnown RBP2.49□□□□□ -2.01
CPNE3-201ENST00000517354 DEFB106AQ8N104 65 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 C10orf105Q8TEF2 133 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 DPY30Q9C005 99 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 LINC00312Q9Y6C7 94 aa2.49□□□□□ -2.01
CPNE3-201ENST00000517354 TCRBV3S1A0A5B6 114 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 TMEM262E9PQX1 116 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 LYRM1O43325 122 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 EDF1O60869 148 aaKnown RBP2.48□□□□□ -2.01
CPNE3-201ENST00000517354 IGLC1P0CG04 106 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 SAA1P0DJI8 122 aaPredicted RBP2.48□□□□□ -2.01
CPNE3-201ENST00000517354 IL7P13232 177 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 KRTAP12-4P60329 112 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 ROMO1P60602 79 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 LSM3P62310 102 aaKnown RBP2.48□□□□□ -2.01
CPNE3-201ENST00000517354 FAM74A1Q5RGS3 127 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 CLECL1Q8IZS7 167 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 Q8N814 137 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 COX14Q96I36 57 aa2.48□□□□□ -2.01
CPNE3-201ENST00000517354 MGAM2Q2M2H8 2515 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 ABCA1O95477 2261 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 ZNF736B4DX44 427 aaPredicted RBP2.47□□□□□ -2.01
CPNE3-201ENST00000517354 CKS2P33552 79 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 KRTAP12-1P59990 96 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 C2orf82Q6UX34 121 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 MUCL1Q96DR8 90 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 REG4Q9BYZ8 158 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 TPRKBQ9Y3C4 175 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 SCN3AQ9NY46 2000 aa2.47□□□□□ -2.01
CPNE3-201ENST00000517354 TCRBV4S1A1TA0A5B7 111 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 HYPMO75409 117 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 GYPBP06028 91 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 NPC2P61916 151 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 C4orf3Q8WVX3 66 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 PSMF1Q92530 271 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 RAB37Q96AX2 223 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 HYLS1Q96M11 299 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 AQP10Q96PS8 301 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 CST11Q9H112 138 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 ATG5Q9H1Y0 275 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 DNAJC13O75165 2243 aa2.46□□□□□ -2.02
CPNE3-201ENST00000517354 USF3Q68DE3 2245 aa2.45□□□□□ -2.02
CPNE3-201ENST00000517354 RBAKDNA6NC62 111 aa2.45□□□□□ -2.02
CPNE3-201ENST00000517354 YPEL1O60688 119 aa2.45□□□□□ -2.02
CPNE3-201ENST00000517354 DSCR4P56555 118 aaPredicted RBP2.45□□□□□ -2.02
CPNE3-201ENST00000517354 C1orf137Q5JT78 98 aa2.45□□□□□ -2.02
CPNE3-201ENST00000517354 C1orf134Q5TEV5 83 aa2.45□□□□□ -2.02
CPNE3-201ENST00000517354 OR2T2Q6IF00 324 aa2.45□□□□□ -2.02
CPNE3-201ENST00000517354 FAM19A2Q8N3H0 131 aa2.45□□□□□ -2.02
CPNE3-201ENST00000517354 ZNF563Q8TA94 476 aa2.45□□□□□ -2.02
CPNE3-201ENST00000517354 WNK1Q9H4A3 2382 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 TENM1Q9UKZ4 2725 aa2.44□□□□□ -2.02
CPNE3-201ENST00000517354 SNRNP200O75643 2136 aaKnown RBP2.44□□□□□ -2.02
CPNE3-201ENST00000517354 IGHV1-24A0A0C4DH33 117 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms