RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 SBF2Q86WG5 1849 aa0.58□□□□□ -2.32
SCARNA15.2-201ENST00000516409 MLH3Q9UHC1 1453 aa0.58□□□□□ -2.32
SCARNA15.2-201ENST00000516409 DIP2CQ9Y2E4 1556 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 TTC28Q96AY4 2481 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 TRBV25-1A0A075B6N4 114 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 PMCHL1Q16048 86 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 LCN9Q8WX39 176 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 CNFNQ9BYD5 112 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 KDM3BQ7LBC6 1761 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 PLXNB2O15031 1838 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 WNK3Q9BYP7 1800 aa0.57□□□□□ -2.32
SCARNA15.2-201ENST00000516409 RAPGEF6Q8TEU7 1601 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 ANK2Q01484 3957 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 SCN7AQ01118 1682 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 KCPQ6ZWJ8 1503 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 A0A087WVE0 104 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 UQCRHP07919 91 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 PSMG4Q5JS54 123 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 SMR3AQ99954 134 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 Q9H521 79 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 SPCS1Q9Y6A9 102 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 LAMC1P11047 1609 aa0.56□□□□□ -2.32
SCARNA15.2-201ENST00000516409 BDP1A6H8Y1 2624 aa0.55□□□□□ -2.32
SCARNA15.2-201ENST00000516409 MAGI1Q96QZ7 1491 aaPredicted RBP0.55□□□□□ -2.32
SCARNA15.2-201ENST00000516409 SMARCA2P51531 1590 aa0.55□□□□□ -2.32
SCARNA15.2-201ENST00000516409 TRBV7-7A0A0K0K1E9 115 aa0.55□□□□□ -2.32
SCARNA15.2-201ENST00000516409 SYS1-DBNDD2H3BUS1 97 aa0.55□□□□□ -2.32
SCARNA15.2-201ENST00000516409 LINC01600Q96MT4 127 aa0.55□□□□□ -2.32
SCARNA15.2-201ENST00000516409 PRO1933Q9H354 126 aa0.55□□□□□ -2.32
SCARNA15.2-201ENST00000516409 PLEKHH2Q8IVE3 1493 aa0.54□□□□□ -2.32
SCARNA15.2-201ENST00000516409 UQCRHLA0A096LP55 91 aa0.54□□□□□ -2.32
SCARNA15.2-201ENST00000516409 TRBV6-1A0A0K0K1D8 114 aa0.54□□□□□ -2.32
SCARNA15.2-201ENST00000516409 TP53AIP1Q9HCN2 124 aa0.54□□□□□ -2.32
SCARNA15.2-201ENST00000516409 AKAP12Q02952 1782 aa0.54□□□□□ -2.32
SCARNA15.2-201ENST00000516409 CACNA1CQ13936 2221 aa0.54□□□□□ -2.32
SCARNA15.2-201ENST00000516409 MYO7BQ6PIF6 2116 aa0.53□□□□□ -2.32
SCARNA15.2-201ENST00000516409 FAM208BQ5VWN6 2430 aa0.53□□□□□ -2.32
SCARNA15.2-201ENST00000516409 I3L2K1 104 aa0.53□□□□□ -2.32
SCARNA15.2-201ENST00000516409 LINC00846Q9NV44 126 aa0.53□□□□□ -2.32
SCARNA15.2-201ENST00000516409 ARHGEF12Q9NZN5 1544 aa0.53□□□□□ -2.33
SCARNA15.2-201ENST00000516409 ANKRD26Q9UPS8 1709 aa0.52□□□□□ -2.33
SCARNA15.2-201ENST00000516409 TNCP24821 2201 aa0.52□□□□□ -2.33
SCARNA15.2-201ENST00000516409 C20orf78Q9BR46 151 aa0.52□□□□□ -2.33
SCARNA15.2-201ENST00000516409 POLA1P09884 1462 aaPredicted RBP0.52□□□□□ -2.33
SCARNA15.2-201ENST00000516409 C1orf167Q5SNV9 1468 aa0.52□□□□□ -2.33
SCARNA15.2-201ENST00000516409 NRXN1Q9ULB1 1477 aa0.52□□□□□ -2.33
SCARNA15.2-201ENST00000516409 RAPGEF2Q9Y4G8 1499 aa0.52□□□□□ -2.33
SCARNA15.2-201ENST00000516409 POLQO75417 2590 aa0.51□□□□□ -2.33
SCARNA15.2-201ENST00000516409 DEFB107AQ8IZN7 70 aa0.51□□□□□ -2.33
SCARNA15.2-201ENST00000516409 HIGD1BQ9P298 99 aa0.51□□□□□ -2.33
SCARNA15.2-201ENST00000516409 V9GYS6 101 aa0.51□□□□□ -2.33
SCARNA15.2-201ENST00000516409 ABCA12Q86UK0 2595 aa0.51□□□□□ -2.33
SCARNA15.2-201ENST00000516409 PDCD11Q14690 1871 aaKnown RBP0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 MARF1Q9Y4F3 1742 aaKnown RBP0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 NLRP1Q9C000 1473 aa0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 FXYD6-FXYD2A0A087WZ82 144 aa0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 GYPAP02724 150 aa0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 ARMS2P0C7Q2 107 aa0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 KRTAP5-10Q6L8G5 202 aa0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 Q8IZM0 81 aa0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 PSENENQ9NZ42 101 aa0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 CACNA1EQ15878 2313 aa0.5□□□□□ -2.33
SCARNA15.2-201ENST00000516409 F8P00451 2351 aa0.49□□□□□ -2.33
SCARNA15.2-201ENST00000516409 TPRP12270 2363 aaKnown RBP0.49□□□□□ -2.33
SCARNA15.2-201ENST00000516409 LINC00959A0A1B0GUT2 108 aa0.49□□□□□ -2.33
SCARNA15.2-201ENST00000516409 F8WEM9 126 aa0.49□□□□□ -2.33
SCARNA15.2-201ENST00000516409 GNG2P59768 71 aa0.49□□□□□ -2.33
SCARNA15.2-201ENST00000516409 PIGYQ3MUY2 71 aa0.49□□□□□ -2.33
SCARNA15.2-201ENST00000516409 Q5BKY6 102 aa0.49□□□□□ -2.33
SCARNA15.2-201ENST00000516409 ZNF720Q7Z2F6 126 aa0.49□□□□□ -2.33
SCARNA15.2-201ENST00000516409 PIEZO1Q92508 2521 aa0.48□□□□□ -2.33
SCARNA15.2-201ENST00000516409 TROQ12816 1431 aaPredicted RBP0.48□□□□□ -2.33
SCARNA15.2-201ENST00000516409 AHCTF1Q8WYP5 2266 aa0.48□□□□□ -2.33
SCARNA15.2-201ENST00000516409 MUC16Q8WXI7 14507 aa0.48□□□□□ -2.33
SCARNA15.2-201ENST00000516409 H3BQF6 201 aa0.48□□□□□ -2.33
SCARNA15.2-201ENST00000516409 ETDBQ3ZM63 59 aa0.48□□□□□ -2.33
SCARNA15.2-201ENST00000516409 BAZ1AQ9NRL2 1556 aaPredicted RBP0.48□□□□□ -2.33
SCARNA15.2-201ENST00000516409 SYNE1Q8NF91 8797 aaKnown RBP0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 TRBV7-4A0A0J9YYF1 115 aa0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 H0Y9P7 68 aa0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 LEPROTL1O95214 131 aa0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 GNGT1P63211 74 aa0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 KRTAP21-1Q3LI58 79 aa0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 TTC37Q6PGP7 1564 aa0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 NUP188Q5SRE5 1749 aa0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 EDC4Q6P2E9 1401 aaKnown RBP0.47□□□□□ -2.33
SCARNA15.2-201ENST00000516409 PAPPAQ13219 1627 aa0.46□□□□□ -2.34
SCARNA15.2-201ENST00000516409 A0A1B0GU69 56 aa0.46□□□□□ -2.34
SCARNA15.2-201ENST00000516409 C6orf201Q7Z4U5 140 aa0.46□□□□□ -2.34
SCARNA15.2-201ENST00000516409 GOLGA4Q13439 2230 aaKnown RBP0.46□□□□□ -2.34
SCARNA15.2-201ENST00000516409 KNDC1Q76NI1 1749 aa0.46□□□□□ -2.34
SCARNA15.2-201ENST00000516409 CELSR2Q9HCU4 2923 aa0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 SPTBN2O15020 2390 aa0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 D6R8Y8 96 aa0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 CFDP00746 253 aaPredicted RBP0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 SPINK1P00995 79 aa0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 PYY3Q5JQD4 70 aa0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 MUSTN1Q8IVN3 82 aa0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 C9orf62Q8N4C0 152 aa0.45□□□□□ -2.34
SCARNA15.2-201ENST00000516409 PLCE1Q9P212 2302 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms