RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 HACD3Q9P035 362 aa-1.41□□□□□ -2.64
SCARNA21.1-201ENST00000515996 SLC35A3Q9Y2D2 325 aa-1.41□□□□□ -2.64
SCARNA21.1-201ENST00000515996 PRELID3BQ9Y3B1 194 aa-1.41□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TCHHQ07283 1943 aa-1.41□□□□□ -2.64
SCARNA21.1-201ENST00000515996 C3orf85A0A1B0GTC6 90 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 ZNF670-ZNF695F2Z2N8 137 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 H3BUT2 72 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 GABARAPO95166 117 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 IGKCP01834 107 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 APOEP02649 317 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 FABP1P07148 127 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 OCMP0CE72 109 aaPredicted RBP-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 UBBP0CG47 229 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 SAT1P21673 171 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 SDC4P31431 198 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TALDO1P37837 337 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 MARCKSL1P49006 195 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 SULT1E1P49888 294 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 LSM6P62312 80 aaKnown RBP-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 PLGLAQ15195 96 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 NDUFA5Q16718 116 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 IDNKQ5T6J7 187 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 NCBP2-AS2Q69YL0 99 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 OR2T2Q6IF00 324 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 CPLX4Q7Z7G2 160 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 MDP1Q86V88 176 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 COMMD2Q86X83 199 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 LRRC20Q8TCA0 184 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 BORCS8Q96FH0 119 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 DCUN1D1Q96GG9 259 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 ATP6V1G3Q96LB4 118 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TEX37Q96LM6 180 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 HYLS1Q96M11 299 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 CCL13Q99616 98 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 MGLLQ99685 303 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 LXNQ9BS40 222 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 H2AFJQ9BTM1 129 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 SNHG12Q9BXW3 62 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 PKIBQ9C010 78 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 RAB9BQ9NP90 201 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 RGS18Q9NS28 235 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 EMC3Q9P0I2 261 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 LAMTOR2Q9Y2Q5 125 aa-1.42□□□□□ -2.64
SCARNA21.1-201ENST00000515996 A0A1B0GU69 56 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 hADV38S2A0JD32 116 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 KRT87PA6NCN2 255 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 A6NIN4 97 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 DISC1C4P0D8 188 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 H0YIV9 168 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TIMM8AO60220 97 aaPredicted RBP-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 CIB2O75838 187 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 ATP5LO75964 103 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 PTHP01270 115 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TRACP01848 142 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 IL5P05113 134 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 ANXA5P08758 320 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 HSPA5P11021 654 aaKnown RBP-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 CXCR1P25024 350 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 RRM2P31350 389 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TAS2R31P59538 309 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TAS2R30P59541 319 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 GABARAPL2P60520 117 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 SEC11AP67812 179 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 CCL20P78556 96 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 CDK6Q00534 326 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 FABP5Q01469 135 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 MXD1Q05195 221 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 SMAGPQ0VAQ4 97 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 LRRC37A5PQ49AS3 106 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 S100A7L2Q5SY68 101 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TMEM170BQ5T4T1 132 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 BLOC1S2Q6QNY1 142 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TOMM20LQ6UXN7 152 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 HDDC2Q7Z4H3 204 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 GLYATL2Q8WU03 294 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 PTP4A1Q93096 173 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 ARL11Q969Q4 196 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TSACCQ96A04 125 aaPredicted RBP-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 CCDC47Q96A33 483 aaKnown RBP-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 LRRC39Q96DD0 335 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TMA16Q96EY4 203 aaKnown RBP-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 FAM167A-AS1Q96KT0 104 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TSGA13Q96PP4 275 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 COPS8Q99627 209 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 GABARAPL1Q9H0R8 117 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 C1orf21Q9H246 121 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 LINC00597Q9H2U6 94 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 GOLPH3Q9H4A6 298 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 NCOR1P1Q9H4R4 102 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 COMMD9Q9P000 198 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 IFNKQ9P0W0 207 aa-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 CHCHD2Q9Y6H1 151 aaPredicted RBP-1.43□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TRAV13-1A0A0B4J241 112 aa-1.44□□□□□ -2.64
SCARNA21.1-201ENST00000515996 TRBV11-1A0A0K0K1C0 115 aa-1.44□□□□□ -2.64
SCARNA21.1-201ENST00000515996 UQCR11O14957 56 aa-1.44□□□□□ -2.64
SCARNA21.1-201ENST00000515996 ARPC3O15145 178 aa-1.44□□□□□ -2.64
SCARNA21.1-201ENST00000515996 RGS16O15492 202 aaPredicted RBP-1.44□□□□□ -2.64
SCARNA21.1-201ENST00000515996 MT-ATP6P00846 226 aa-1.44□□□□□ -2.64
SCARNA21.1-201ENST00000515996 APOC1P02654 83 aa-1.44□□□□□ -2.64
SCARNA21.1-201ENST00000515996 SAA1P0DJI8 122 aaPredicted RBP-1.44□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms