RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 ZNF664Q8N3J9 261 aa9.51□□□□□ -0.89
HMGCLL1-209ENST00000515546 AP5S1Q9NUS5 200 aa9.51□□□□□ -0.89
HMGCLL1-209ENST00000515546 UBE2D4Q9Y2X8 147 aa9.51□□□□□ -0.89
HMGCLL1-209ENST00000515546 IGHV3-64A0A075B6Q5 118 aa9.5□□□□□ -0.89
HMGCLL1-209ENST00000515546 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.5□□□□□ -0.89
HMGCLL1-209ENST00000515546 LINC01546A6NGU7 62 aa9.5□□□□□ -0.89
HMGCLL1-209ENST00000515546 C1orf196B1AJZ1 125 aa9.5□□□□□ -0.89
HMGCLL1-209ENST00000515546 CCL25O15444 150 aa9.5□□□□□ -0.89
HMGCLL1-209ENST00000515546 XCL1P47992 114 aa9.5□□□□□ -0.89
HMGCLL1-209ENST00000515546 TIMM21Q9BVV7 248 aa9.5□□□□□ -0.89
HMGCLL1-209ENST00000515546 NXT2Q9NPJ8 142 aaKnown RBP9.5□□□□□ -0.89
HMGCLL1-209ENST00000515546 SMAGPQ0VAQ4 97 aa9.49□□□□□ -0.89
HMGCLL1-209ENST00000515546 PRSS3P2Q8NHM4 247 aa9.49□□□□□ -0.89
HMGCLL1-209ENST00000515546 HIGD2BQ4VC39 106 aa9.48□□□□□ -0.89
HMGCLL1-209ENST00000515546 PKHD1L1Q86WI1 4243 aa9.47□□□□□ -0.89
HMGCLL1-209ENST00000515546 SS18Q15532 418 aa9.47□□□□□ -0.89
HMGCLL1-209ENST00000515546 CD164L2Q6UWJ8 174 aa9.47□□□□□ -0.89
HMGCLL1-209ENST00000515546 Q6ZUT4 128 aa9.47□□□□□ -0.89
HMGCLL1-209ENST00000515546 FA2HQ7L5A8 372 aa9.47□□□□□ -0.89
HMGCLL1-209ENST00000515546 IGHV1-58A0A0C4DH39 117 aa9.46□□□□□ -0.9
HMGCLL1-209ENST00000515546 NUPR1O60356 82 aa9.46□□□□□ -0.9
HMGCLL1-209ENST00000515546 SERF1AO75920 110 aa9.46□□□□□ -0.9
HMGCLL1-209ENST00000515546 LINC00614P0C842 121 aa9.46□□□□□ -0.9
HMGCLL1-209ENST00000515546 BAGE3Q86Y29 109 aa9.46□□□□□ -0.9
HMGCLL1-209ENST00000515546 SPACA4Q8TDM5 124 aa9.46□□□□□ -0.9
HMGCLL1-209ENST00000515546 TMEM18Q96B42 140 aa9.46□□□□□ -0.9
HMGCLL1-209ENST00000515546 A0A096LNJ9 63 aa9.45□□□□□ -0.9
HMGCLL1-209ENST00000515546 K7EMI3 77 aa9.45□□□□□ -0.9
HMGCLL1-209ENST00000515546 RAB5BP61020 215 aa9.45□□□□□ -0.9
HMGCLL1-209ENST00000515546 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
HMGCLL1-209ENST00000515546 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
HMGCLL1-209ENST00000515546 RPL39P62891 51 aaKnown RBP9.44□□□□□ -0.9
HMGCLL1-209ENST00000515546 PMCHL1Q16048 86 aa9.44□□□□□ -0.9
HMGCLL1-209ENST00000515546 ORMDL2Q53FV1 153 aa9.44□□□□□ -0.9
HMGCLL1-209ENST00000515546 RNASE13Q5GAN3 156 aaKnown RBP9.44□□□□□ -0.9
HMGCLL1-209ENST00000515546 COA6Q5JTJ3 125 aaKnown RBP9.44□□□□□ -0.9
HMGCLL1-209ENST00000515546 CHCHD1Q96BP2 118 aaKnown RBP9.44□□□□□ -0.9
HMGCLL1-209ENST00000515546 SPANXA1Q9NS26 97 aa9.44□□□□□ -0.9
HMGCLL1-209ENST00000515546 NDUFA6P56556 154 aa9.43□□□□□ -0.9
HMGCLL1-209ENST00000515546 MRPS36P82909 103 aaKnown RBP9.42□□□□□ -0.9
HMGCLL1-209ENST00000515546 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
HMGCLL1-209ENST00000515546 TRAV13-1A0A0B4J241 112 aa9.41□□□□□ -0.9
HMGCLL1-209ENST00000515546 COX7A2LO14548 114 aa9.41□□□□□ -0.9
HMGCLL1-209ENST00000515546 RPL37AP61513 92 aaKnown RBP9.41□□□□□ -0.9
HMGCLL1-209ENST00000515546 COX6A2Q02221 97 aa9.41□□□□□ -0.9
HMGCLL1-209ENST00000515546 C2orf66Q6UXQ4 117 aa9.41□□□□□ -0.9
HMGCLL1-209ENST00000515546 PLAC8Q9NZF1 115 aa9.41□□□□□ -0.9
HMGCLL1-209ENST00000515546 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
HMGCLL1-209ENST00000515546 A0A087WYN8 130 aa9.4□□□□□ -0.9
HMGCLL1-209ENST00000515546 HSBP1O75506 76 aa9.4□□□□□ -0.9
HMGCLL1-209ENST00000515546 FAM19A2Q8N3H0 131 aa9.4□□□□□ -0.9
HMGCLL1-209ENST00000515546 TOMM6Q96B49 74 aa9.4□□□□□ -0.9
HMGCLL1-209ENST00000515546 LINC00526Q96FQ7 95 aa9.4□□□□□ -0.9
HMGCLL1-209ENST00000515546 CARD19Q96LW7 228 aa9.4□□□□□ -0.9
HMGCLL1-209ENST00000515546 CYSLTR1Q9Y271 337 aa9.4□□□□□ -0.9
HMGCLL1-209ENST00000515546 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
HMGCLL1-209ENST00000515546 HBDP02042 147 aa9.39□□□□□ -0.91
HMGCLL1-209ENST00000515546 PDZD11Q5EBL8 140 aa9.39□□□□□ -0.91
HMGCLL1-209ENST00000515546 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
HMGCLL1-209ENST00000515546 A0A096LNI7 61 aa9.38□□□□□ -0.91
HMGCLL1-209ENST00000515546 ZNF561-AS1K7EIQ3 104 aa9.38□□□□□ -0.91
HMGCLL1-209ENST00000515546 MALP21145 153 aa9.38□□□□□ -0.91
HMGCLL1-209ENST00000515546 SYCNQ0VAF6 134 aa9.38□□□□□ -0.91
HMGCLL1-209ENST00000515546 OPRPNQ99935 248 aaPredicted RBP9.38□□□□□ -0.91
HMGCLL1-209ENST00000515546 PKIGQ9Y2B9 76 aa9.38□□□□□ -0.91
HMGCLL1-209ENST00000515546 TMA7Q9Y2S6 64 aaKnown RBP9.38□□□□□ -0.91
HMGCLL1-209ENST00000515546 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
HMGCLL1-209ENST00000515546 IGLV4-69A0A075B6H9 119 aa9.36□□□□□ -0.91
HMGCLL1-209ENST00000515546 IGLV4-3A0A075B6K6 122 aa9.36□□□□□ -0.91
HMGCLL1-209ENST00000515546 IGHV3OR16-9A0A0B4J2B5 98 aa9.36□□□□□ -0.91
HMGCLL1-209ENST00000515546 IGKV2-24A0A0C4DH68 120 aa9.36□□□□□ -0.91
HMGCLL1-209ENST00000515546 IFITM10A6NMD0 228 aa9.36□□□□□ -0.91
HMGCLL1-209ENST00000515546 HNRNPA3P51991 378 aaKnown RBP9.36□□□□□ -0.91
HMGCLL1-209ENST00000515546 LINC00173Q6ZV60 143 aa9.36□□□□□ -0.91
HMGCLL1-209ENST00000515546 C5orf38Q86SI9 138 aa9.36□□□□□ -0.91
HMGCLL1-209ENST00000515546 G0S2P27469 103 aa9.35□□□□□ -0.91
HMGCLL1-209ENST00000515546 MAJINQ3KP22 176 aa9.35□□□□□ -0.91
HMGCLL1-209ENST00000515546 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
HMGCLL1-209ENST00000515546 C2orf48Q96LS8 159 aa9.35□□□□□ -0.91
HMGCLL1-209ENST00000515546 SCGB3A1Q96QR1 104 aa9.35□□□□□ -0.91
HMGCLL1-209ENST00000515546 LINC00474Q9P2X8 69 aa9.35□□□□□ -0.91
HMGCLL1-209ENST00000515546 APOMO95445 188 aa9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 SNRPEP62304 92 aaKnown RBP9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 ZC2HC1BQ5TFG8 222 aa9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 Q6ZRU5 148 aa9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 ERASQ7Z444 233 aa9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 HIST3H2BBQ8N257 126 aa9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 DPH3Q96FX2 82 aa9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 TIMM17AQ99595 171 aa9.34□□□□□ -0.91
HMGCLL1-209ENST00000515546 C5orf52A6NGY3 159 aa9.33□□□□□ -0.92
HMGCLL1-209ENST00000515546 J3QL48 77 aa9.33□□□□□ -0.92
HMGCLL1-209ENST00000515546 S100A6P06703 90 aa9.33□□□□□ -0.92
HMGCLL1-209ENST00000515546 STPG4Q8N801 248 aa9.33□□□□□ -0.92
HMGCLL1-209ENST00000515546 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
HMGCLL1-209ENST00000515546 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
HMGCLL1-209ENST00000515546 LINC01549A6NIU2 74 aa9.32□□□□□ -0.92
HMGCLL1-209ENST00000515546 NPSP0C0P6 89 aa9.32□□□□□ -0.92
HMGCLL1-209ENST00000515546 LOC107984640A0A0U1RRK4 108 aa9.31□□□□□ -0.92
HMGCLL1-209ENST00000515546 LEPROTL1O95214 131 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms