RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 PRG4Q92954 1404 aaPredicted RBP-1.31□□□□□ -2.62
SMARCA5-203ENST00000515531 EYSQ5T1H1 3165 aa-1.31□□□□□ -2.62
SMARCA5-203ENST00000515531 MT1HP80294 61 aa-1.31□□□□□ -2.62
SMARCA5-203ENST00000515531 AIF1LQ9BQI0 150 aa-1.31□□□□□ -2.62
SMARCA5-203ENST00000515531 GSKIPQ9P0R6 139 aa-1.31□□□□□ -2.62
SMARCA5-203ENST00000515531 V9GYH0 126 aa-1.31□□□□□ -2.62
SMARCA5-203ENST00000515531 CHD7Q9P2D1 2997 aa-1.31□□□□□ -2.62
SMARCA5-203ENST00000515531 GCN1Q92616 2671 aaKnown RBP-1.32□□□□□ -2.62
SMARCA5-203ENST00000515531 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.32□□□□□ -2.62
SMARCA5-203ENST00000515531 DEFA5Q01523 94 aa-1.32□□□□□ -2.62
SMARCA5-203ENST00000515531 MAFIPQ8WZ33 124 aa-1.32□□□□□ -2.62
SMARCA5-203ENST00000515531 AMELXQ99217 191 aa-1.32□□□□□ -2.62
SMARCA5-203ENST00000515531 SMIM3Q9BZL3 60 aa-1.32□□□□□ -2.62
SMARCA5-203ENST00000515531 DNAH5Q8TE73 4624 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 UTP20O75691 2785 aaKnown RBP-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 TRAV13-2A0A0B4J235 113 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 HCG22E2RYF7 251 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 GUCA1AP43080 201 aaPredicted RBP-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 C10orf128Q5T292 105 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 TAC4Q86UU9 113 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 LINC00472Q9H8W2 130 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 ARAP2Q8WZ64 1704 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 GAPVD1Q14C86 1478 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 KALRNO60229 2985 aa-1.33□□□□□ -2.62
SMARCA5-203ENST00000515531 PIGBOS1A0A0B4J2F0 54 aa-1.34□□□□□ -2.62
SMARCA5-203ENST00000515531 M0R2Z0 102 aa-1.34□□□□□ -2.62
SMARCA5-203ENST00000515531 UQCR11O14957 56 aa-1.34□□□□□ -2.62
SMARCA5-203ENST00000515531 SCGB1A1P11684 91 aa-1.34□□□□□ -2.62
SMARCA5-203ENST00000515531 DMXL1Q9Y485 3027 aa-1.34□□□□□ -2.62
SMARCA5-203ENST00000515531 K7ERU9 68 aa-1.35□□□□□ -2.63
SMARCA5-203ENST00000515531 APOC3P02656 99 aa-1.35□□□□□ -2.63
SMARCA5-203ENST00000515531 MT1XP80297 61 aa-1.35□□□□□ -2.63
SMARCA5-203ENST00000515531 Q6AWC8 147 aa-1.35□□□□□ -2.63
SMARCA5-203ENST00000515531 BAGE2Q86Y30 109 aa-1.35□□□□□ -2.63
SMARCA5-203ENST00000515531 KCNRGQ8N5I3 272 aa-1.35□□□□□ -2.63
SMARCA5-203ENST00000515531 DNAH17Q9UFH2 4485 aa-1.35□□□□□ -2.63
SMARCA5-203ENST00000515531 PKD1L2Q7Z442 2459 aa-1.35□□□□□ -2.63
SMARCA5-203ENST00000515531 SPENQ96T58 3664 aaKnown RBP-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 COL14A1Q05707 1796 aaKnown RBP-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 FHAD1B1AJZ9 1412 aa-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 TPPP2P59282 170 aa-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 PPIP5K1Q6PFW1 1433 aa-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 TTC9CQ8N5M4 171 aa-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 DEFB105AQ8NG35 78 aa-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 ITPR2Q14571 2701 aa-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 RIMS1Q86UR5 1692 aaKnown RBP-1.36□□□□□ -2.63
SMARCA5-203ENST00000515531 RAPGEF6Q8TEU7 1601 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 ZFHX3Q15911 3703 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 SHANK2Q9UPX8 1470 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 TRRAPQ9Y4A5 3859 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 MT1HL1P0DM35 61 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 CKS1BP61024 79 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 DNAH8Q96JB1 4490 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 ACACAQ13085 2346 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 ARHGEF12Q9NZN5 1544 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 C5orf42Q9H799 3197 aa-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 POLA1P09884 1462 aaPredicted RBP-1.37□□□□□ -2.63
SMARCA5-203ENST00000515531 ZZEF1O43149 2961 aa-1.38□□□□□ -2.63
SMARCA5-203ENST00000515531 F8VRH5 84 aa-1.38□□□□□ -2.63
SMARCA5-203ENST00000515531 CFAP46Q8IYW2 2715 aa-1.38□□□□□ -2.63
SMARCA5-203ENST00000515531 NSD3Q9BZ95 1437 aa-1.39□□□□□ -2.63
SMARCA5-203ENST00000515531 DNAH10Q8IVF4 4471 aa-1.39□□□□□ -2.63
SMARCA5-203ENST00000515531 H0YAA0 97 aa-1.39□□□□□ -2.63
SMARCA5-203ENST00000515531 ACACBO00763 2458 aa-1.39□□□□□ -2.63
SMARCA5-203ENST00000515531 DEFB112Q30KQ8 113 aa-1.4□□□□□ -2.63
SMARCA5-203ENST00000515531 KRTAP19-6Q3LI70 58 aa-1.4□□□□□ -2.63
SMARCA5-203ENST00000515531 TCEAL4Q96EI5 215 aa-1.4□□□□□ -2.63
SMARCA5-203ENST00000515531 TMEM191AQ9H0A3 160 aa-1.4□□□□□ -2.63
SMARCA5-203ENST00000515531 BTAF1O14981 1849 aa-1.4□□□□□ -2.63
SMARCA5-203ENST00000515531 TULP4Q9NRJ4 1543 aa-1.4□□□□□ -2.63
SMARCA5-203ENST00000515531 TRIOO75962 3097 aa-1.41□□□□□ -2.63
SMARCA5-203ENST00000515531 C12orf73Q69YU5 71 aa-1.41□□□□□ -2.64
SMARCA5-203ENST00000515531 NDUFA4L2Q9NRX3 87 aa-1.41□□□□□ -2.64
SMARCA5-203ENST00000515531 PSME4Q14997 1843 aa-1.41□□□□□ -2.64
SMARCA5-203ENST00000515531 KIAA0556O60303 1618 aa-1.41□□□□□ -2.64
SMARCA5-203ENST00000515531 MYOM3Q5VTT5 1437 aa-1.41□□□□□ -2.64
SMARCA5-203ENST00000515531 TCHHQ07283 1943 aa-1.42□□□□□ -2.64
SMARCA5-203ENST00000515531 TRBV7-4A0A0J9YYF1 115 aa-1.42□□□□□ -2.64
SMARCA5-203ENST00000515531 MT1GP13640 62 aa-1.42□□□□□ -2.64
SMARCA5-203ENST00000515531 COPZ1P61923 177 aa-1.42□□□□□ -2.64
SMARCA5-203ENST00000515531 DYNLRB1Q9NP97 96 aa-1.42□□□□□ -2.64
SMARCA5-203ENST00000515531 LINC01558Q9Y6Z2 57 aa-1.42□□□□□ -2.64
SMARCA5-203ENST00000515531 FRYQ5TBA9 3013 aa-1.42□□□□□ -2.64
SMARCA5-203ENST00000515531 ANKRD30AQ9BXX3 1397 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 IGLC7A0M8Q6 106 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 MT1BP07438 61 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 SMCO1Q147U7 214 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 KRTAP19-5Q3LI72 72 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 TSTD1Q8NFU3 115 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 MGST2Q99735 147 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 TPT1P8Q9HAU6 139 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 CCDC167Q9P0B6 97 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 COL4A6Q14031 1691 aa-1.43□□□□□ -2.64
SMARCA5-203ENST00000515531 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.44□□□□□ -2.64
SMARCA5-203ENST00000515531 SYS1-DBNDD2H3BUS1 97 aa-1.44□□□□□ -2.64
SMARCA5-203ENST00000515531 COX8AP10176 69 aa-1.44□□□□□ -2.64
SMARCA5-203ENST00000515531 DEFB135Q30KP9 77 aa-1.44□□□□□ -2.64
SMARCA5-203ENST00000515531 PYDC1Q8WXC3 89 aa-1.44□□□□□ -2.64
SMARCA5-203ENST00000515531 COPS9Q8WXC6 57 aa-1.44□□□□□ -2.64
SMARCA5-203ENST00000515531 LZICQ8WZA0 190 aa-1.44□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms