RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 G0S2P27469 103 aa8.17□□□□□ -1.1
CLCN3-210ENST00000515420 CYSLTR1Q9Y271 337 aa8.17□□□□□ -1.1
CLCN3-210ENST00000515420 IFITM10A6NMD0 228 aa8.16□□□□□ -1.1
CLCN3-210ENST00000515420 C2orf66Q6UXQ4 117 aa8.16□□□□□ -1.1
CLCN3-210ENST00000515420 SPACA4Q8TDM5 124 aa8.16□□□□□ -1.1
CLCN3-210ENST00000515420 TMEM141Q96I45 108 aa8.16□□□□□ -1.1
CLCN3-210ENST00000515420 CARD19Q96LW7 228 aa8.16□□□□□ -1.1
CLCN3-210ENST00000515420 RPS10P5Q9NQ39 176 aa8.16□□□□□ -1.1
CLCN3-210ENST00000515420 IGLV4-3A0A075B6K6 122 aa8.15□□□□□ -1.1
CLCN3-210ENST00000515420 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
CLCN3-210ENST00000515420 PANO1I0J062 215 aa8.15□□□□□ -1.1
CLCN3-210ENST00000515420 COX6A2Q02221 97 aa8.15□□□□□ -1.1
CLCN3-210ENST00000515420 NDUFA5Q16718 116 aa8.15□□□□□ -1.1
CLCN3-210ENST00000515420 OR10D4PQ8NGN7 298 aa8.15□□□□□ -1.1
CLCN3-210ENST00000515420 C2orf48Q96LS8 159 aa8.15□□□□□ -1.1
CLCN3-210ENST00000515420 OPRPNQ99935 248 aaPredicted RBP8.15□□□□□ -1.1
CLCN3-210ENST00000515420 LINC00474Q9P2X8 69 aa8.15□□□□□ -1.1
CLCN3-210ENST00000515420 LINC01549A6NIU2 74 aa8.14□□□□□ -1.11
CLCN3-210ENST00000515420 F8WDY8 70 aa8.14□□□□□ -1.11
CLCN3-210ENST00000515420 SYCNQ0VAF6 134 aa8.14□□□□□ -1.11
CLCN3-210ENST00000515420 TEX43Q6ZNM6 134 aa8.14□□□□□ -1.11
CLCN3-210ENST00000515420 IGLV4-69A0A075B6H9 119 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 TGIF2-C20orf24A0A0A6YYL0 155 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 SNAPINO95295 136 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
CLCN3-210ENST00000515420 KIAA1644Q3SXP7 199 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 PAPPA-AS1Q5QFB9 102 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 Q6ZN92 141 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 C5orf38Q86SI9 138 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 SVBPQ8N300 66 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 PLAC8Q9NZF1 115 aa8.13□□□□□ -1.11
CLCN3-210ENST00000515420 FLG2Q5D862 2391 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-210ENST00000515420 A0A087WYN8 130 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 LINC01546A6NGU7 62 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 IGIPA6NJ69 53 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 APOC3P02656 99 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 CHTF8P0CG12 524 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 TOMM6Q96B49 74 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 AMELXQ99217 191 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 TIMM17AQ99595 171 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 C2orf88Q9BSF0 95 aa8.12□□□□□ -1.11
CLCN3-210ENST00000515420 ALKBH7Q9BT30 221 aaPredicted RBP8.12□□□□□ -1.11
CLCN3-210ENST00000515420 A0A087WZ39 114 aa8.11□□□□□ -1.11
CLCN3-210ENST00000515420 UBE2D1P51668 147 aa8.11□□□□□ -1.11
CLCN3-210ENST00000515420 RPL37AP61513 92 aaKnown RBP8.11□□□□□ -1.11
CLCN3-210ENST00000515420 SPAG11BQ08648 103 aa8.11□□□□□ -1.11
CLCN3-210ENST00000515420 LINC00242Q5T6M2 205 aa8.11□□□□□ -1.11
CLCN3-210ENST00000515420 LINC00173Q6ZV60 143 aa8.11□□□□□ -1.11
CLCN3-210ENST00000515420 FAM19A3Q7Z5A8 133 aa8.11□□□□□ -1.11
CLCN3-210ENST00000515420 DPH3Q96FX2 82 aa8.11□□□□□ -1.11
CLCN3-210ENST00000515420 CAMK2N2Q96S95 79 aa8.11□□□□□ -1.11
CLCN3-210ENST00000515420 MRPL18Q9H0U6 180 aaKnown RBP8.11□□□□□ -1.11
CLCN3-210ENST00000515420 A0A096LNI7 61 aa8.1□□□□□ -1.11
CLCN3-210ENST00000515420 RNF151Q2KHN1 245 aa8.1□□□□□ -1.11
CLCN3-210ENST00000515420 Q6ZRU5 148 aa8.1□□□□□ -1.11
CLCN3-210ENST00000515420 LINC01561Q8N1V8 128 aa8.1□□□□□ -1.11
CLCN3-210ENST00000515420 ORAOV1Q8WV07 137 aa8.1□□□□□ -1.11
CLCN3-210ENST00000515420 VCX2Q9H322 139 aa8.1□□□□□ -1.11
CLCN3-210ENST00000515420 IGKV2-24A0A0C4DH68 120 aa8.09□□□□□ -1.11
CLCN3-210ENST00000515420 LOC107984640A0A0U1RRK4 108 aa8.09□□□□□ -1.11
CLCN3-210ENST00000515420 SEC11AP67812 179 aa8.09□□□□□ -1.11
CLCN3-210ENST00000515420 FABP9Q0Z7S8 132 aa8.09□□□□□ -1.11
CLCN3-210ENST00000515420 MAJINQ3KP22 176 aa8.09□□□□□ -1.11
CLCN3-210ENST00000515420 ERASQ7Z444 233 aa8.09□□□□□ -1.11
CLCN3-210ENST00000515420 MRPL35Q9NZE8 188 aaKnown RBP8.08□□□□□ -1.12
CLCN3-210ENST00000515420 MYCBP2O75592 4640 aa8.08□□□□□ -1.12
CLCN3-210ENST00000515420 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
CLCN3-210ENST00000515420 NDUFA1O15239 70 aa8.07□□□□□ -1.12
CLCN3-210ENST00000515420 PTTG1IPP53801 180 aa8.07□□□□□ -1.12
CLCN3-210ENST00000515420 FA2HQ7L5A8 372 aa8.07□□□□□ -1.12
CLCN3-210ENST00000515420 STPG4Q8N801 248 aa8.07□□□□□ -1.12
CLCN3-210ENST00000515420 C7orf33Q8WU49 177 aa8.07□□□□□ -1.12
CLCN3-210ENST00000515420 TRAPPC1Q9Y5R8 145 aa8.07□□□□□ -1.12
CLCN3-210ENST00000515420 HERVK_113P63121 156 aa8.06□□□□□ -1.12
CLCN3-210ENST00000515420 SCGB3A1Q96QR1 104 aa8.06□□□□□ -1.12
CLCN3-210ENST00000515420 SMCO4Q9NRQ5 59 aa8.06□□□□□ -1.12
CLCN3-210ENST00000515420 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.05□□□□□ -1.12
CLCN3-210ENST00000515420 KIAA0087Q14695 138 aa8.05□□□□□ -1.12
CLCN3-210ENST00000515420 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
CLCN3-210ENST00000515420 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
CLCN3-210ENST00000515420 ZC2HC1BQ5TFG8 222 aa8.04□□□□□ -1.12
CLCN3-210ENST00000515420 C18orf32Q8TCD1 76 aa8.04□□□□□ -1.12
CLCN3-210ENST00000515420 TRBV30A0A0K0K1B3 111 aa8.03□□□□□ -1.12
CLCN3-210ENST00000515420 GAGE2BQ13066 116 aa8.03□□□□□ -1.12
CLCN3-210ENST00000515420 YPEL4Q96NS1 127 aa8.03□□□□□ -1.12
CLCN3-210ENST00000515420 RPL18AQ02543 176 aaKnown RBP8.02□□□□□ -1.13
CLCN3-210ENST00000515420 Q8IZM0 81 aa8.02□□□□□ -1.13
CLCN3-210ENST00000515420 GEMIN7Q9H840 131 aaKnown RBP8.02□□□□□ -1.13
CLCN3-210ENST00000515420 TINCRA0A1B0GVN0 87 aa8.01□□□□□ -1.13
CLCN3-210ENST00000515420 OXTP01178 125 aa8.01□□□□□ -1.13
CLCN3-210ENST00000515420 LINC00614P0C842 121 aa8.01□□□□□ -1.13
CLCN3-210ENST00000515420 RAB5BP61020 215 aa8.01□□□□□ -1.13
CLCN3-210ENST00000515420 C10orf25Q5T742 122 aa8.01□□□□□ -1.13
CLCN3-210ENST00000515420 UNQ6190/PRO20217Q6UXQ8 127 aa8.01□□□□□ -1.13
CLCN3-210ENST00000515420 C6orf48Q9UBA6 75 aa8.01□□□□□ -1.13
CLCN3-210ENST00000515420 CDKN2A-AS1Q9UH64 79 aa8.01□□□□□ -1.13
CLCN3-210ENST00000515420 IGLV5-45A0A087WSX0 123 aa8□□□□□ -1.13
CLCN3-210ENST00000515420 A0A0J9YXV3 536 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms