RNA–Protein interactions for RNA: ENST00000515298.5

PAPD4-216, Transcript of Poly(A) RNA polymerase GLD2, humanhuman

TSL 2

Gene PAPD4, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPD4-216ENST00000515298 DPH3Q96FX2 82 aa-0.43□□□□□ -2.48
PAPD4-216ENST00000515298 MGST2Q99735 147 aa-0.43□□□□□ -2.48
PAPD4-216ENST00000515298 PDCD10Q9BUL8 212 aa-0.43□□□□□ -2.48
PAPD4-216ENST00000515298 DYNLRB1Q9NP97 96 aa-0.43□□□□□ -2.48
PAPD4-216ENST00000515298 HERC2O95714 4834 aa-0.43□□□□□ -2.48
PAPD4-216ENST00000515298 RGPD2P0DJD1 1756 aa-0.43□□□□□ -2.48
PAPD4-216ENST00000515298 SHANK2Q9UPX8 1470 aa-0.43□□□□□ -2.48
PAPD4-216ENST00000515298 KNL1Q8NG31 2342 aa-0.43□□□□□ -2.48
PAPD4-216ENST00000515298 A0A0G2JMZ2 1700 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 XRN1Q8IZH2 1706 aaKnown RBP-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 TRBV7-3A0A075B6L6 115 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 CPSF4LA6NMK7 179 aaKnown RBP-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 MGPP08493 103 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 COX8AP10176 69 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 UBA52P62987 128 aaKnown RBP-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 DEFB112Q30KQ8 113 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 C10orf113Q5VZT2 155 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 TMEM263Q8WUH6 116 aaKnown RBP-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 MAFIPQ8WZ33 124 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 TCEAL4Q96EI5 215 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 TMEM191AQ9H0A3 160 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 COPZ2Q9P299 210 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 FAT1Q14517 4588 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 CFTRP13569 1480 aa-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 MAGI1Q96QZ7 1491 aaPredicted RBP-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 SONP18583 2426 aaKnown RBP-0.44□□□□□ -2.48
PAPD4-216ENST00000515298 SETBP1Q9Y6X0 1596 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 CPSF1Q10570 1443 aaKnown RBP-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 COL4A6Q14031 1691 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 GRIN2AQ12879 1464 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 IFNGP01579 166 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 IGLC1P0CG04 106 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 B2MP61769 119 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 SMIM21Q3B7S5 101 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 H1FX-AS1Q4G0G2 97 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 C12orf73Q69YU5 71 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 MRPL54Q6P161 138 aaKnown RBP-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 AKAP14Q86UN6 197 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 LCN9Q8WX39 176 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 PYDC1Q8WXC3 89 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 ANP32BQ92688 251 aaKnown RBP-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 USMG5Q96IX5 58 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 NAA60Q9H7X0 242 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 FAIMQ9NVQ4 179 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 CRIPTQ9P021 101 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 CCDC167Q9P0B6 97 aa-0.45□□□□□ -2.48
PAPD4-216ENST00000515298 TOP2BQ02880 1626 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 USP9YO00507 2555 aaPredicted RBP-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 CUL7Q14999 1698 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 QRICH2Q9H0J4 1663 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 C1orf167Q5SNV9 1468 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 HIVEP1P15822 2718 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 STARD9Q9P2P6 4700 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 LOC285095A0A1B0GVY8 99 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 MIF4GDA9UHW6 222 aaKnown RBP-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 CHKB-CPT1BH3BT56 60 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 FAM223AQ8IWN6 122 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 COPS9Q8WXC6 57 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 LINC01600Q96MT4 127 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 SPRR4Q96PI1 79 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 RERGLQ9H628 205 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 NXT2Q9NPJ8 142 aaKnown RBP-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 LINC00474Q9P2X8 69 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 SERP1Q9Y6X1 66 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 KIF20BQ96Q89 1820 aa-0.46□□□□□ -2.48
PAPD4-216ENST00000515298 KNDC1Q76NI1 1749 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 KIAA1551Q9HCM1 1747 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.47□□□□□ -2.483e-9■■■■■ 34.1
PAPD4-216ENST00000515298 NLRP1Q9C000 1473 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 BCORQ6W2J9 1755 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 USH2AO75445 5202 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 ARPC4P59998 168 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 DR1Q01658 176 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 CATR1Q13166 79 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 MEIG1Q5JSS6 88 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 SFTA2Q6UW10 78 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 C9orf62Q8N4C0 152 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 MYOZ3Q8TDC0 251 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 FAM167A-AS1Q96KT0 104 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 PFDN5Q99471 154 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 SPANXDQ9BXN6 97 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 ARL2-SNX15V9GYD0 113 aa-0.47□□□□□ -2.48
PAPD4-216ENST00000515298 ZFHX3Q15911 3703 aa-0.47□□□□□ -2.49
PAPD4-216ENST00000515298 SMG6Q86US8 1419 aaKnown RBP-0.47□□□□□ -2.49
PAPD4-216ENST00000515298 NKTRP30414 1462 aaKnown RBP-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 PLEKHH2Q8IVE3 1493 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 SLIT1O75093 1534 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 EHBP1L1Q8N3D4 1523 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 NBPF19A0A087WUL8 3843 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 ADAMTS12P58397 1594 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 UBR4Q5T4S7 5183 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 PTPN23Q9H3S7 1636 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 FASNP49327 2511 aaKnown RBP-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 LOC100130705A0A1B0GUX0 176 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 FAM25AB3EWG3 89 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 FAM25CB3EWG5 89 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 FAM25GB3EWG6 89 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 SEC11AP67812 179 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 WHAMMP3Q1A5X7 153 aa-0.48□□□□□ -2.49
PAPD4-216ENST00000515298 Q56UQ5 140 aa-0.48□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms