RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 FAM74A4Q5TZK3 123 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 KRTAP5-4Q6L8H1 288 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 C10orf99Q6UWK7 81 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 FAM19A3Q7Z5A8 133 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 NDUFA11Q86Y39 141 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 SBSPONQ8IVN8 264 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 C10orf126Q8N4M7 172 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 ZNRF2Q8NHG8 242 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 DYNLRB2Q8TF09 96 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 SPANXDQ9BXN6 97 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 SPANXCQ9NY87 97 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 PRO0461Q9UI25 63 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 FBN3Q75N90 2809 aa2.63□□□□□ -1.99
CAST-242ENST00000515063 NACAE9PAV3 2078 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 CSPG4Q6UVK1 2322 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 TRAV26-1A0A087WT03 109 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 IGHV1-58A0A0C4DH39 117 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 RBMY1BA6NDE4 496 aaKnown RBP2.62□□□□□ -1.99
CAST-242ENST00000515063 RBMY1EA6NEQ0 496 aaKnown RBP2.62□□□□□ -1.99
CAST-242ENST00000515063 KNCNA6PVL3 124 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 K7ERJ3 54 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 RBMY1DP0C7P1 496 aaKnown RBP2.62□□□□□ -1.99
CAST-242ENST00000515063 RBMY1A1P0DJD3 496 aaKnown RBP2.62□□□□□ -1.99
CAST-242ENST00000515063 RBMY1CP0DJD4 496 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 IFITM1P13164 125 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 RBMY1FQ15415 496 aaKnown RBP2.62□□□□□ -1.99
CAST-242ENST00000515063 KRTAP21-3Q3LHN1 58 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 CFAP126Q5VTH2 177 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 TMEM61Q8N0U2 210 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 C11orf72Q8NBR9 251 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 KLHL30-AS1Q8NEE0 82 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 COPS9Q8WXC6 57 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 NRGNQ92686 78 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 NAA38Q9BRA0 125 aaKnown RBP2.62□□□□□ -1.99
CAST-242ENST00000515063 CHCHD7Q9BUK0 85 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 C16orf95Q9H693 158 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 Q9HAA7 133 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 MRPL16Q9NX20 251 aaKnown RBP2.62□□□□□ -1.99
CAST-242ENST00000515063 PRO1854Q9UHT4 67 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 CSDC2Q9Y534 153 aaKnown RBP2.62□□□□□ -1.99
CAST-242ENST00000515063 DOPEY2Q9Y3R5 2298 aa2.62□□□□□ -1.99
CAST-242ENST00000515063 CREBBPQ92793 2442 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 TRAV4A0A0B4J268 109 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 A0A0J9YXV3 536 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 RPL37AP8A6NKH3 93 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 TSPAN13O95857 204 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 IGHV3-33P01772 117 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 CD28P10747 220 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 TSPEAR-AS2P59090 65 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 DAZ2Q13117 558 aaKnown RBP2.61□□□□□ -1.99
CAST-242ENST00000515063 ZFAND6Q6FIF0 208 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 TMEM263Q8WUH6 116 aaKnown RBP2.61□□□□□ -1.99
CAST-242ENST00000515063 FAM104AQ969W3 186 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 LINC01587Q99440 93 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 GTSF1LQ9H1H1 148 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 UBE2D4Q9Y2X8 147 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 RELNP78509 3460 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 IGSF10Q6WRI0 2623 aa2.61□□□□□ -1.99
CAST-242ENST00000515063 CFAP46Q8IYW2 2715 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 TRBV30A0A0K0K1B3 111 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 TMEM262E9PQX1 116 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 APOMO95445 188 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 KRTAP1-4P0C5Y4 121 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 IGHV3-30-3P0DP02 117 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 HERVK_113P63121 156 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 WFDC2Q14508 124 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 ETDBQ3ZM63 59 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 DAZ4Q86SG3 579 aaKnown RBP2.6□□□□□ -1.99
CAST-242ENST00000515063 TEN1Q86WV5 123 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 PPDPFLQ8WWR9 84 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 VSIG2Q96IQ7 327 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 SIGMAR1Q99720 223 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 DAZ3Q9NR90 486 aaKnown RBP2.6□□□□□ -1.99
CAST-242ENST00000515063 NDUFA12Q9UI09 145 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 ERG28Q9UKR5 140 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 TSSC4Q9Y5U2 329 aaPredicted RBP2.6□□□□□ -1.99
CAST-242ENST00000515063 SPG11Q96JI7 2443 aa2.6□□□□□ -1.99
CAST-242ENST00000515063 UBR5O95071 2799 aaPredicted RBP2.6□□□□□ -1.99
CAST-242ENST00000515063 LOC107984156A0A0G2JMH3 177 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 TRBV6-4A0A1B0GX49 114 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 NDUFA1O15239 70 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 IGLV1-51P01701 117 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 COX6CP09669 75 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 SCGB1C2P0DMR2 95 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 PSMB2P49721 201 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 EMP1P54849 157 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 KRTAP12-2P59991 146 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 CIRBPQ14011 172 aaKnown RBP2.59□□□□□ -1.99
CAST-242ENST00000515063 ATXN8Q156A1 80 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 DEFB136Q30KP8 78 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 LINC01620Q4KN68 170 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 REG3GQ6UW15 175 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 MUSTN1Q8IVN3 82 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 ARL17AQ8IVW1 177 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 C1orf158Q8N1D5 194 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 C16orf74Q96GX8 76 aa2.59□□□□□ -1.99
CAST-242ENST00000515063 GEMIN7Q9H840 131 aaKnown RBP2.59□□□□□ -1.99
CAST-242ENST00000515063 FLNCQ14315 2725 aa2.59□□□□□ -2
CAST-242ENST00000515063 SORL1Q92673 2214 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms