RNA–Protein interactions for RNA: ENST00000514898.1

RUFY3-213, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 4

Gene RUFY3, Length 482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-213ENST00000514898 GAGE2EQ4V326 116 aa13.76□□□□□ -0.21
RUFY3-213ENST00000514898 SLC51BQ86UW2 128 aa13.76□□□□□ -0.21
RUFY3-213ENST00000514898 GAGE2DQ9UEU5 116 aa13.76□□□□□ -0.21
RUFY3-213ENST00000514898 CARHSP1Q9Y2V2 147 aaKnown RBP13.76□□□□□ -0.21
RUFY3-213ENST00000514898 M0QXV9 152 aa13.75□□□□□ -0.21
RUFY3-213ENST00000514898 RPL39P62891 51 aaKnown RBP13.75□□□□□ -0.21
RUFY3-213ENST00000514898 KIAA0087Q14695 138 aa13.75□□□□□ -0.21
RUFY3-213ENST00000514898 LINC01551Q86U37 167 aa13.75□□□□□ -0.21
RUFY3-213ENST00000514898 OSTCQ9NRP0 149 aa13.73□□□□□ -0.21
RUFY3-213ENST00000514898 PPP1R2P9O14990 202 aa13.72□□□□□ -0.21
RUFY3-213ENST00000514898 MRPL51Q4U2R6 128 aaKnown RBP13.72□□□□□ -0.21
RUFY3-213ENST00000514898 C9orf129Q5T035 196 aaKnown RBP13.72□□□□□ -0.21
RUFY3-213ENST00000514898 TMEM18Q96B42 140 aa13.72□□□□□ -0.21
RUFY3-213ENST00000514898 KRTAP9-6A0A140TA67 174 aa13.71□□□□□ -0.21
RUFY3-213ENST00000514898 RPL32P62910 135 aaKnown RBP13.71□□□□□ -0.21
RUFY3-213ENST00000514898 UBE2BP63146 152 aa13.71□□□□□ -0.21
RUFY3-213ENST00000514898 V9GYV3 84 aa13.71□□□□□ -0.21
RUFY3-213ENST00000514898 TRBV24-1A0A075B6N3 115 aa13.7□□□□□ -0.22
RUFY3-213ENST00000514898 MRPS36P82909 103 aaKnown RBP13.7□□□□□ -0.22
RUFY3-213ENST00000514898 RIGQ13278 110 aa13.7□□□□□ -0.22
RUFY3-213ENST00000514898 FAM104BQ5XKR9 115 aa13.7□□□□□ -0.22
RUFY3-213ENST00000514898 C20orf78Q9BR46 151 aa13.7□□□□□ -0.22
RUFY3-213ENST00000514898 CEBPGP53567 150 aa13.69□□□□□ -0.22
RUFY3-213ENST00000514898 SPANXA1Q9NS26 97 aa13.69□□□□□ -0.22
RUFY3-213ENST00000514898 ZNF861PO60384 105 aa13.68□□□□□ -0.22
RUFY3-213ENST00000514898 SMIM7Q9BQ49 75 aa13.68□□□□□ -0.22
RUFY3-213ENST00000514898 TSPAN13O95857 204 aa13.67□□□□□ -0.22
RUFY3-213ENST00000514898 TRBV30A0A0K0K1B3 111 aa13.66□□□□□ -0.22
RUFY3-213ENST00000514898 IFITM10A6NMD0 228 aa13.66□□□□□ -0.22
RUFY3-213ENST00000514898 NDUFC2-KCTD14E9PQ53 114 aa13.66□□□□□ -0.22
RUFY3-213ENST00000514898 C2orf82Q6UX34 121 aa13.66□□□□□ -0.22
RUFY3-213ENST00000514898 TCTE3Q8IZS6 198 aa13.66□□□□□ -0.22
RUFY3-213ENST00000514898 LINC00862A6NCI5 91 aa13.65□□□□□ -0.22
RUFY3-213ENST00000514898 HBBP68871 147 aa13.65□□□□□ -0.22
RUFY3-213ENST00000514898 A0A087X002 238 aa13.64□□□□□ -0.23
RUFY3-213ENST00000514898 SMIM2Q9BVW6 85 aa13.64□□□□□ -0.23
RUFY3-213ENST00000514898 MUC17Q685J3 4493 aa13.63□□□□□ -0.23
RUFY3-213ENST00000514898 TCAPO15273 167 aa13.63□□□□□ -0.23
RUFY3-213ENST00000514898 TNFRSF6BO95407 300 aa13.63□□□□□ -0.23
RUFY3-213ENST00000514898 BLOC1S1P78537 153 aa13.63□□□□□ -0.23
RUFY3-213ENST00000514898 LINC00242Q5T6M2 205 aa13.63□□□□□ -0.23
RUFY3-213ENST00000514898 NAT8BQ9UHF3 227 aa13.62□□□□□ -0.23
RUFY3-213ENST00000514898 TGIF2-C20orf24A0A0A6YYL0 155 aa13.61□□□□□ -0.23
RUFY3-213ENST00000514898 ZNF727A8MUV8 499 aa13.61□□□□□ -0.23
RUFY3-213ENST00000514898 ALKAL2Q6UX46 152 aa13.61□□□□□ -0.23
RUFY3-213ENST00000514898 CKS2P33552 79 aa13.6□□□□□ -0.23
RUFY3-213ENST00000514898 SRP19P09132 144 aaKnown RBP13.59□□□□□ -0.23
RUFY3-213ENST00000514898 FAM74A3Q4VXF1 159 aa13.59□□□□□ -0.23
RUFY3-213ENST00000514898 SMIM27A0A1W2PRY6 76 aa13.58□□□□□ -0.24
RUFY3-213ENST00000514898 NUPR1O60356 82 aa13.58□□□□□ -0.24
RUFY3-213ENST00000514898 NPYP01303 97 aa13.58□□□□□ -0.24
RUFY3-213ENST00000514898 C22orf24Q9Y442 160 aa13.58□□□□□ -0.24
RUFY3-213ENST00000514898 CTDSP1Q9GZU7 261 aa13.57□□□□□ -0.24
RUFY3-213ENST00000514898 EIF5A2Q9GZV4 153 aaKnown RBP13.57□□□□□ -0.24
RUFY3-213ENST00000514898 IGLV4-3A0A075B6K6 122 aa13.56□□□□□ -0.24
RUFY3-213ENST00000514898 D6R8Y8 96 aa13.56□□□□□ -0.24
RUFY3-213ENST00000514898 PACRGQ96M98 296 aaPredicted RBP13.56□□□□□ -0.24
RUFY3-213ENST00000514898 PYGO1Q9Y3Y4 419 aa13.56□□□□□ -0.24
RUFY3-213ENST00000514898 LINC01561Q8N1V8 128 aa13.55□□□□□ -0.24
RUFY3-213ENST00000514898 RPL23P62829 140 aaKnown RBP13.54□□□□□ -0.24
RUFY3-213ENST00000514898 IFI27P40305 119 aaPredicted RBP13.53□□□□□ -0.24
RUFY3-213ENST00000514898 LINC00469Q8N7U9 141 aa13.53□□□□□ -0.24
RUFY3-213ENST00000514898 A0A1B0GW15 77 aa13.52□□□□□ -0.25
RUFY3-213ENST00000514898 CRYGAP11844 174 aa13.52□□□□□ -0.25
RUFY3-213ENST00000514898 TYMSOSQ8TAI1 123 aa13.52□□□□□ -0.25
RUFY3-213ENST00000514898 XAGE1AQ9HD64 81 aa13.51□□□□□ -0.25
RUFY3-213ENST00000514898 A0A1B0GXF2 115 aa13.5□□□□□ -0.25
RUFY3-213ENST00000514898 KRTAP13-2Q52LG2 175 aa13.5□□□□□ -0.25
RUFY3-213ENST00000514898 LBHQ53QV2 105 aaPredicted RBP13.5□□□□□ -0.25
RUFY3-213ENST00000514898 TMEM141Q96I45 108 aa13.5□□□□□ -0.25
RUFY3-213ENST00000514898 BCE1O60756 84 aa13.49□□□□□ -0.25
RUFY3-213ENST00000514898 LINC00173Q6ZV60 143 aa13.49□□□□□ -0.25
RUFY3-213ENST00000514898 RETNLBQ9BQ08 111 aa13.49□□□□□ -0.25
RUFY3-213ENST00000514898 ANAPC11Q9NYG5 84 aa13.49□□□□□ -0.25
RUFY3-213ENST00000514898 TP73-AS1Q9UF72 201 aa13.49□□□□□ -0.25
RUFY3-213ENST00000514898 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
RUFY3-213ENST00000514898 ZC2HC1BQ5TFG8 222 aa13.48□□□□□ -0.25
RUFY3-213ENST00000514898 PPBPP02775 128 aa13.47□□□□□ -0.25
RUFY3-213ENST00000514898 MRPL54Q6P161 138 aaKnown RBP13.47□□□□□ -0.25
RUFY3-213ENST00000514898 ADIRFQ15847 76 aa13.46□□□□□ -0.25
RUFY3-213ENST00000514898 MRPL55Q7Z7F7 128 aaKnown RBP13.46□□□□□ -0.25
RUFY3-213ENST00000514898 C9JQL5 133 aa13.45□□□□□ -0.26
RUFY3-213ENST00000514898 RAB5AP20339 215 aa13.45□□□□□ -0.26
RUFY3-213ENST00000514898 TEX43Q6ZNM6 134 aa13.45□□□□□ -0.26
RUFY3-213ENST00000514898 Q8IZM0 81 aa13.45□□□□□ -0.26
RUFY3-213ENST00000514898 AMELXQ99217 191 aa13.45□□□□□ -0.26
RUFY3-213ENST00000514898 F8W036 122 aa13.44□□□□□ -0.26
RUFY3-213ENST00000514898 CKS1BP61024 79 aa13.44□□□□□ -0.26
RUFY3-213ENST00000514898 TPRXLQ17RH7 258 aa13.44□□□□□ -0.26
RUFY3-213ENST00000514898 Q6ZN92 141 aa13.44□□□□□ -0.26
RUFY3-213ENST00000514898 KRTAP13-1Q8IUC0 172 aa13.44□□□□□ -0.26
RUFY3-213ENST00000514898 TOMM7Q9P0U1 55 aa13.44□□□□□ -0.26
RUFY3-213ENST00000514898 FAM19A3Q7Z5A8 133 aa13.43□□□□□ -0.26
RUFY3-213ENST00000514898 ORMDL3Q8N138 153 aa13.43□□□□□ -0.26
RUFY3-213ENST00000514898 PRSS47A8MTI9 375 aa13.42□□□□□ -0.26
RUFY3-213ENST00000514898 PRSS2P07478 247 aa13.42□□□□□ -0.26
RUFY3-213ENST00000514898 C6orf226Q5I0X4 101 aa13.42□□□□□ -0.26
RUFY3-213ENST00000514898 NAT8Q9UHE5 227 aa13.42□□□□□ -0.26
RUFY3-213ENST00000514898 S100A8P05109 93 aa13.41□□□□□ -0.26
RUFY3-213ENST00000514898 TMEM136Q6ZRR5 245 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms