RNA–Protein interactions for RNA: ENST00000513538.1

TCOF1-212, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-212ENST00000513538 ZNF664Q8N3J9 261 aa5.83□□□□□ -1.48
TCOF1-212ENST00000513538 FAM104AQ969W3 186 aa5.83□□□□□ -1.48
TCOF1-212ENST00000513538 C20orf78Q9BR46 151 aa5.83□□□□□ -1.48
TCOF1-212ENST00000513538 KRTAP9-2Q9BYQ4 174 aa5.83□□□□□ -1.48
TCOF1-212ENST00000513538 UBE2D4Q9Y2X8 147 aa5.83□□□□□ -1.48
TCOF1-212ENST00000513538 PPP1R2P9O14990 202 aa5.82□□□□□ -1.48
TCOF1-212ENST00000513538 IGLV7-43P04211 117 aa5.82□□□□□ -1.48
TCOF1-212ENST00000513538 KRTAP1-4P0C5Y4 121 aa5.82□□□□□ -1.48
TCOF1-212ENST00000513538 RPL18AQ02543 176 aaKnown RBP5.82□□□□□ -1.48
TCOF1-212ENST00000513538 CAMK2N2Q96S95 79 aa5.82□□□□□ -1.48
TCOF1-212ENST00000513538 OPRPNQ99935 248 aaPredicted RBP5.82□□□□□ -1.48
TCOF1-212ENST00000513538 TIMM21Q9BVV7 248 aa5.82□□□□□ -1.48
TCOF1-212ENST00000513538 FAM168BA1KXE4 195 aa5.81□□□□□ -1.48
TCOF1-212ENST00000513538 COX7A2LO14548 114 aa5.81□□□□□ -1.48
TCOF1-212ENST00000513538 TNFRSF6BO95407 300 aa5.81□□□□□ -1.48
TCOF1-212ENST00000513538 MALP21145 153 aa5.81□□□□□ -1.48
TCOF1-212ENST00000513538 D6R8Y8 96 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 H0Y9J4 135 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 NPYP01303 97 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 FCER1GP30273 86 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 CKS2P33552 79 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 HBBP68871 147 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 MRPL54Q6P161 138 aaKnown RBP5.8□□□□□ -1.48
TCOF1-212ENST00000513538 C5orf38Q86SI9 138 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 KRTAP7-1Q8IUC3 87 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 DIRC1Q969H9 104 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 C2orf48Q96LS8 159 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 KIR2DL4Q99706 377 aa5.8□□□□□ -1.48
TCOF1-212ENST00000513538 TRAV13-1A0A0B4J241 112 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 PRSS47A8MTI9 375 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 C1orf196B1AJZ1 125 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 TCAPO15273 167 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 S100A8P05109 93 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 SPAG11BQ08648 103 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 Q6ZUT4 128 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 ATP5L2Q7Z4Y8 100 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 TMEM18Q96B42 140 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 SMIM2Q9BVW6 85 aa5.79□□□□□ -1.48
TCOF1-212ENST00000513538 F8W036 122 aa5.78□□□□□ -1.48
TCOF1-212ENST00000513538 PPBPP02775 128 aa5.78□□□□□ -1.48
TCOF1-212ENST00000513538 RPL39P62891 51 aaKnown RBP5.78□□□□□ -1.48
TCOF1-212ENST00000513538 PNRC1Q12796 327 aaPredicted RBP5.78□□□□□ -1.48
TCOF1-212ENST00000513538 CLLU1Q5K131 121 aa5.78□□□□□ -1.48
TCOF1-212ENST00000513538 C10orf25Q5T742 122 aa5.78□□□□□ -1.48
TCOF1-212ENST00000513538 IGLV1-50A0A075B6I6 118 aa5.77□□□□□ -1.49
TCOF1-212ENST00000513538 A0A087WZ39 114 aa5.77□□□□□ -1.49
TCOF1-212ENST00000513538 MRPS36P82909 103 aaKnown RBP5.77□□□□□ -1.49
TCOF1-212ENST00000513538 IFITM2Q01629 132 aa5.77□□□□□ -1.49
TCOF1-212ENST00000513538 RNF151Q2KHN1 245 aa5.77□□□□□ -1.49
TCOF1-212ENST00000513538 FAM19A5Q7Z5A7 132 aaPredicted RBP5.77□□□□□ -1.49
TCOF1-212ENST00000513538 ANAPC16Q96DE5 110 aa5.77□□□□□ -1.49
TCOF1-212ENST00000513538 MUC2Q02817 5179 aa5.76□□□□□ -1.49
TCOF1-212ENST00000513538 PRR4Q16378 134 aa5.76□□□□□ -1.49
TCOF1-212ENST00000513538 TMEM136Q6ZRR5 245 aa5.76□□□□□ -1.49
TCOF1-212ENST00000513538 ORMDL3Q8N138 153 aa5.76□□□□□ -1.49
TCOF1-212ENST00000513538 MRPL35Q9NZE8 188 aaKnown RBP5.76□□□□□ -1.49
TCOF1-212ENST00000513538 C6orf48Q9UBA6 75 aa5.76□□□□□ -1.49
TCOF1-212ENST00000513538 IGHV3OR16-9A0A0B4J2B5 98 aa5.75□□□□□ -1.49
TCOF1-212ENST00000513538 ADCYAP1P18509 176 aa5.75□□□□□ -1.49
TCOF1-212ENST00000513538 RAB14P61106 215 aa5.75□□□□□ -1.49
TCOF1-212ENST00000513538 OR10D4PQ8NGN7 298 aa5.75□□□□□ -1.49
TCOF1-212ENST00000513538 ORAOV1Q8WV07 137 aa5.75□□□□□ -1.49
TCOF1-212ENST00000513538 PRELID3AQ96N28 172 aa5.75□□□□□ -1.49
TCOF1-212ENST00000513538 SPANXA1Q9NS26 97 aa5.75□□□□□ -1.49
TCOF1-212ENST00000513538 PYGO1Q9Y3Y4 419 aa5.75□□□□□ -1.49
TCOF1-212ENST00000513538 MT-ND4LP03901 98 aa5.74□□□□□ -1.49
TCOF1-212ENST00000513538 TLX1NBP0CAT3 122 aa5.74□□□□□ -1.49
TCOF1-212ENST00000513538 UNQ6190/PRO20217Q6UXQ8 127 aa5.74□□□□□ -1.49
TCOF1-212ENST00000513538 LAMTOR2Q9Y2Q5 125 aa5.74□□□□□ -1.49
TCOF1-212ENST00000513538 M0QXV9 152 aa5.73□□□□□ -1.49
TCOF1-212ENST00000513538 NDUFA1O15239 70 aa5.73□□□□□ -1.49
TCOF1-212ENST00000513538 GAGE2EQ4V326 116 aa5.73□□□□□ -1.49
TCOF1-212ENST00000513538 IMMP2LQ96T52 175 aa5.73□□□□□ -1.49
TCOF1-212ENST00000513538 GAGE2DQ9UEU5 116 aa5.73□□□□□ -1.49
TCOF1-212ENST00000513538 IGLV4-3A0A075B6K6 122 aa5.72□□□□□ -1.49
TCOF1-212ENST00000513538 TMEM218A2RU14 115 aa5.72□□□□□ -1.49
TCOF1-212ENST00000513538 RAB5AP20339 215 aa5.72□□□□□ -1.49
TCOF1-212ENST00000513538 KIAA0087Q14695 138 aa5.72□□□□□ -1.49
TCOF1-212ENST00000513538 UQCC3Q6UW78 93 aa5.72□□□□□ -1.49
TCOF1-212ENST00000513538 Q8N8P6 123 aa5.72□□□□□ -1.49
TCOF1-212ENST00000513538 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
TCOF1-212ENST00000513538 F8WDY8 70 aa5.71□□□□□ -1.5
TCOF1-212ENST00000513538 IFI27P40305 119 aaPredicted RBP5.71□□□□□ -1.5
TCOF1-212ENST00000513538 UBE2D1P51668 147 aa5.71□□□□□ -1.5
TCOF1-212ENST00000513538 C9orf129Q5T035 196 aaKnown RBP5.71□□□□□ -1.5
TCOF1-212ENST00000513538 LINC00242Q5T6M2 205 aa5.71□□□□□ -1.5
TCOF1-212ENST00000513538 LINC00173Q6ZV60 143 aa5.71□□□□□ -1.5
TCOF1-212ENST00000513538 MAP1LC3AQ9H492 121 aa5.71□□□□□ -1.5
TCOF1-212ENST00000513538 A0A0U1RQV1 116 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 LOC389332A0A1B0GUA5 103 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 IFITM10A6NMD0 228 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 K7EMI3 77 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 RPL13AP40429 203 aaKnown RBP5.7□□□□□ -1.5
TCOF1-212ENST00000513538 UBE2BP63146 152 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 C2orf82Q6UX34 121 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 FAM19A3Q7Z5A8 133 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 AMELXQ99217 191 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 CTDSP1Q9GZU7 261 aa5.7□□□□□ -1.5
TCOF1-212ENST00000513538 TRAV9-1A0A075B6T8 112 aa5.69□□□□□ -1.5
TCOF1-212ENST00000513538 A0A087X002 238 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms