RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 UBE2L6O14933 153 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 CCL25O15444 150 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 APOMO95445 188 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 ESDP10768 282 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 G0S2P27469 103 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 CRIP1P50238 77 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 CXCL6P80162 114 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 MT1HP80294 61 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 IL15RAQ13261 267 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 NDUFA5Q16718 116 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 UQCC3Q6UW78 93 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 FP248Q71RG6 208 aaPredicted RBP2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 SMIM15Q7Z3B0 74 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 NUP35Q8NFH5 326 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 LINC00526Q96FQ7 95 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 SDHCQ99643 169 aaPredicted RBP2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 ZNF471Q9BX82 626 aaPredicted RBP2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 ZFP30Q9Y2G7 519 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 LSM5Q9Y4Y9 91 aaKnown RBP2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 IGSF23A1L1A6 192 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 GRIFINA4D1Z8 144 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 CCDC160A6NGH7 325 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 SMLR1H3BR10 107 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 M0QY20 66 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 CXCL1P09341 107 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 SMIM17P0DL12 118 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 GNG5P63218 68 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 TMEM241Q24JQ0 296 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 COX19Q49B96 90 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 PYDC2Q56P42 97 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 LINC00304Q8N9R0 145 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 OR5A1Q8NGJ0 315 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 IMMP2LQ96T52 175 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 KIR2DL4Q99706 377 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 RETNLBQ9BQ08 111 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 KRTAP4-1Q9BYQ7 146 aa2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 NKX6-2Q9C056 277 aaPredicted RBP2.06□□□□□ -2.08
PDLIM5-218ENST00000513341 FCGBPQ9Y6R7 5405 aaPredicted RBP2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 A0A1W2PRE2 83 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 C19orf71A6NCJ1 209 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 CENPXA8MT69 81 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 TMEM238C9JI98 176 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 M0R036 132 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 SNAI2O43623 268 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 NUPR1O60356 82 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 SERF1AO75920 110 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 NCR2O95944 276 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 OR5AL1P0C617 328 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 TLX1NBP0CAT3 122 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 PET100P0DJ07 73 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 BCL2P10415 239 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 ZNF25P17030 456 aaPredicted RBP2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 RPL32P62910 135 aaKnown RBP2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 MEF2BQ02080 365 aaPredicted RBP2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 SS18Q15532 418 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 KRTAP19-2Q3LHN2 52 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 FAM229BQ4G0N7 80 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 SPAG11AQ6PDA7 123 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 KRTAP11-1Q8IUC1 163 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 OR2D3Q8NGH3 330 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 HIST1H2BAQ96A08 127 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 CAMK2N2Q96S95 79 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 MAP1LC3CQ9BXW4 147 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 NIT2Q9NQR4 276 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 TMEM167BQ9NRX6 74 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 ARL2-SNX15V9GYD0 113 aa2.05□□□□□ -2.08
PDLIM5-218ENST00000513341 IGLV8-61A0A075B6I0 122 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 IGKV3OR2-268A0A0C4DH90 116 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 LINC00959A0A1B0GUT2 108 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 C1orf196B1AJZ1 125 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 G3V3Q6 166 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 SH2D1AO60880 128 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 HSBP1O75506 76 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 PMCHP20382 165 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 RPL28P46779 137 aaKnown RBP2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 XCL1P47992 114 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 NKX2-5P52952 324 aaPredicted RBP2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 UBE2BP63146 152 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 RPL18AQ02543 176 aaKnown RBP2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 SPANXN1Q5VSR9 72 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 TRIQKQ629K1 86 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 AMMECR1LQ6DCA0 310 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 RASL11AQ6T310 242 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 BOD1L2Q8IYS8 172 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 SCGB1C1Q8TD33 95 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 SYNE2Q8WXH0 6885 aaKnown RBP2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 TMEM101Q96IK0 257 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 BTF3L4Q96K17 158 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 PACRGQ96M98 296 aaPredicted RBP2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 CYTL1Q9NRR1 136 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 MRPL35Q9NZE8 188 aaKnown RBP2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 V9GYH0 126 aa2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 MACF1Q9UPN3 7388 aaKnown RBP2.04□□□□□ -2.08
PDLIM5-218ENST00000513341 TMSB15BA0A087X1C1 80 aa2.03□□□□□ -2.08
PDLIM5-218ENST00000513341 M0R2T5 61 aa2.03□□□□□ -2.08
PDLIM5-218ENST00000513341 CXorf1O96002 111 aa2.03□□□□□ -2.08
PDLIM5-218ENST00000513341 ARL14EPLP0DKL9 152 aa2.03□□□□□ -2.08
PDLIM5-218ENST00000513341 OR10AG1Q8NH19 301 aa2.03□□□□□ -2.08
PDLIM5-218ENST00000513341 FMC1Q96HJ9 113 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms