RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 DNAH10Q8IVF4 4471 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 TRAV13-1A0A0B4J241 112 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 PRSS29PA6NIE9 313 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 ATP5LO75964 103 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 PDZD11Q5EBL8 140 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 KRTAP26-1Q6PEX3 210 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 LINC00173Q6ZV60 143 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 CHCHD10Q8WYQ3 142 aaPredicted RBP5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 AMELXQ99217 191 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 VCX2Q9H322 139 aa5.04□□□□□ -1.6
HMGXB3-204ENST00000513318 XCL1P47992 114 aa5.03□□□□□ -1.6
HMGXB3-204ENST00000513318 COA6Q5JTJ3 125 aaKnown RBP5.03□□□□□ -1.6
HMGXB3-204ENST00000513318 CD164L2Q6UWJ8 174 aa5.03□□□□□ -1.6
HMGXB3-204ENST00000513318 FAM19A2Q8N3H0 131 aa5.03□□□□□ -1.6
HMGXB3-204ENST00000513318 BAALCQ8WXS3 180 aa5.03□□□□□ -1.6
HMGXB3-204ENST00000513318 LRCOL1A6NCL2 159 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 GAGE12HA6NDE8 117 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 NUPR1O60356 82 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 LEPROTL1O95214 131 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 UBE2D1P51668 147 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 NDUFA6P56556 154 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 SEC11AP67812 179 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 PMVKQ15126 192 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 ZC2HC1BQ5TFG8 222 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 FAM19A3Q7Z5A8 133 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 MAPKAPK5-AS1Q8N8E1 139 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 IFI27L1Q96BM0 104 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 DNAH2Q9P225 4427 aa5.02□□□□□ -1.61
HMGXB3-204ENST00000513318 RYR3Q15413 4870 aa5.01□□□□□ -1.61
HMGXB3-204ENST00000513318 A0A087WTM6 91 aa5.01□□□□□ -1.61
HMGXB3-204ENST00000513318 HERVK_113P63121 156 aa5.01□□□□□ -1.61
HMGXB3-204ENST00000513318 FOXI1Q12951 378 aa5.01□□□□□ -1.61
HMGXB3-204ENST00000513318 C14orf177Q52M58 125 aa5.01□□□□□ -1.61
HMGXB3-204ENST00000513318 LINC00242Q5T6M2 205 aa5.01□□□□□ -1.61
HMGXB3-204ENST00000513318 PACRGQ96M98 296 aaPredicted RBP5.01□□□□□ -1.61
HMGXB3-204ENST00000513318 HSPB8Q9UJY1 196 aa5.01□□□□□ -1.61
HMGXB3-204ENST00000513318 DNAH17Q9UFH2 4485 aa5□□□□□ -1.61
HMGXB3-204ENST00000513318 IGHV3OR16-9A0A0B4J2B5 98 aa5□□□□□ -1.61
HMGXB3-204ENST00000513318 C5orf52A6NGY3 159 aa5□□□□□ -1.61
HMGXB3-204ENST00000513318 USP17L23D6RBM5 183 aa5□□□□□ -1.61
HMGXB3-204ENST00000513318 LCE4AQ5TA78 99 aa5□□□□□ -1.61
HMGXB3-204ENST00000513318 CST9LQ9H4G1 147 aa5□□□□□ -1.61
HMGXB3-204ENST00000513318 TRAV12-1A0A0B4J245 112 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 IGHV1-58A0A0C4DH39 117 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 TINCRA0A1B0GVN0 87 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 COX7A2LO14548 114 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 LECT2O14960 151 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 APOMO95445 188 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 S100A6P06703 90 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 PRSS1P07477 247 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 FABP4P15090 132 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 MALP21145 153 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 WFDC2Q14508 124 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 CFAP161Q6P656 301 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 Q8N814 137 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 C15orf56Q8N910 161 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 GEMIN7Q9H840 131 aaKnown RBP4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 FAT2Q9NYQ8 4349 aa4.99□□□□□ -1.61
HMGXB3-204ENST00000513318 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 A0A087WZ39 114 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 GVQW2A0A096LPI5 108 aaPredicted RBP4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 A0A0J9YXV3 536 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 A0A1B0GVY2 172 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 F8VRH5 84 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 IGLC3P0DOY3 106 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 COX6A2Q02221 97 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 C5orf38Q86SI9 138 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 LINC01561Q8N1V8 128 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 NTN5Q8WTR8 489 aaPredicted RBP4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 CHAC1Q9BUX1 264 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 MAP1LC3CQ9BXW4 147 aa4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 CHTOPQ9Y3Y2 248 aaKnown RBP4.98□□□□□ -1.61
HMGXB3-204ENST00000513318 IGLV4-69A0A075B6H9 119 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 H0Y8G0 127 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 S100A2P29034 98 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 ODF1Q14990 250 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 SPATA12Q7Z6I5 190 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 LINC00518Q8N0U6 118 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 LINC00469Q8N7U9 141 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 OR10D4PQ8NGN7 298 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 CDKN2A-AS1Q9UH64 79 aa4.97□□□□□ -1.61
HMGXB3-204ENST00000513318 IGHV3-64A0A075B6Q5 118 aa4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 hDV102S1A0JD36 115 aa4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 H3BRM9 83 aa4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 SNRPEP62304 92 aaKnown RBP4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 HIGD2BQ4VC39 106 aa4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 HIST3H2BBQ8N257 126 aa4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 ORAOV1Q8WV07 137 aa4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 MRPL35Q9NZE8 188 aaKnown RBP4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 HECTD4Q9Y4D8 3996 aa4.96□□□□□ -1.62
HMGXB3-204ENST00000513318 IGLV5-52A0A0A0MRZ9 124 aa4.95□□□□□ -1.62
HMGXB3-204ENST00000513318 C11orf86A6NJI1 115 aa4.95□□□□□ -1.62
HMGXB3-204ENST00000513318 ZNF22P17026 224 aaPredicted RBP4.95□□□□□ -1.62
HMGXB3-204ENST00000513318 KRTAP10-2P60368 255 aa4.95□□□□□ -1.62
HMGXB3-204ENST00000513318 SPAG11BQ08648 103 aa4.95□□□□□ -1.62
HMGXB3-204ENST00000513318 PKD1P98161 4303 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms