RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 C1orf43Q9BWL3 253 aa8.37□□□□□ -1.07
PDPN-210ENST00000513143 IGLV4-69A0A075B6H9 119 aa8.36□□□□□ -1.07
PDPN-210ENST00000513143 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
PDPN-210ENST00000513143 A0A0J9YXV3 536 aa8.36□□□□□ -1.07
PDPN-210ENST00000513143 SEC11AP67812 179 aa8.36□□□□□ -1.07
PDPN-210ENST00000513143 NFE4Q86UQ8 179 aa8.36□□□□□ -1.07
PDPN-210ENST00000513143 CHTOPQ9Y3Y2 248 aaKnown RBP8.36□□□□□ -1.07
PDPN-210ENST00000513143 COX11Q9Y6N1 276 aa8.36□□□□□ -1.07
PDPN-210ENST00000513143 TINCRA0A1B0GVN0 87 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 F8VRH5 84 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 XCL1P47992 114 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 COX6A2Q02221 97 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 CD164L2Q6UWJ8 174 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 C6orf223Q8N319 242 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 TM2D2Q9BX73 214 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 MRPL35Q9NZE8 188 aaKnown RBP8.35□□□□□ -1.07
PDPN-210ENST00000513143 HYDINQ4G0P3 5121 aa8.35□□□□□ -1.07
PDPN-210ENST00000513143 KMT2CQ8NEZ4 4911 aaKnown RBP8.34□□□□□ -1.07
PDPN-210ENST00000513143 IGHV3OR16-9A0A0B4J2B5 98 aa8.34□□□□□ -1.07
PDPN-210ENST00000513143 GAGE12HA6NDE8 117 aa8.34□□□□□ -1.07
PDPN-210ENST00000513143 HERVK_113P63121 156 aa8.34□□□□□ -1.07
PDPN-210ENST00000513143 FOXI1Q12951 378 aa8.34□□□□□ -1.07
PDPN-210ENST00000513143 LINC01545Q5VT33 79 aa8.34□□□□□ -1.07
PDPN-210ENST00000513143 Q6ZRN7 208 aaPredicted RBP8.34□□□□□ -1.07
PDPN-210ENST00000513143 OR10D4PQ8NGN7 298 aa8.34□□□□□ -1.07
PDPN-210ENST00000513143 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
PDPN-210ENST00000513143 C1orf134Q5TEV5 83 aa8.33□□□□□ -1.08
PDPN-210ENST00000513143 CHAC1Q9BUX1 264 aa8.33□□□□□ -1.08
PDPN-210ENST00000513143 GEMIN7Q9H840 131 aaKnown RBP8.33□□□□□ -1.08
PDPN-210ENST00000513143 C11orf86A6NJI1 115 aa8.32□□□□□ -1.08
PDPN-210ENST00000513143 DPM2O94777 84 aa8.32□□□□□ -1.08
PDPN-210ENST00000513143 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
PDPN-210ENST00000513143 DNAH10Q8IVF4 4471 aa8.32□□□□□ -1.08
PDPN-210ENST00000513143 DNAH2Q9P225 4427 aa8.32□□□□□ -1.08
PDPN-210ENST00000513143 C20orf202A1L168 122 aa8.31□□□□□ -1.08
PDPN-210ENST00000513143 PLNP26678 52 aa8.31□□□□□ -1.08
PDPN-210ENST00000513143 MAPKAPK5-AS1Q8N8E1 139 aa8.31□□□□□ -1.08
PDPN-210ENST00000513143 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
PDPN-210ENST00000513143 A0A087WZ39 114 aa8.3□□□□□ -1.08
PDPN-210ENST00000513143 COX7A2LO14548 114 aa8.3□□□□□ -1.08
PDPN-210ENST00000513143 IGKCP01834 107 aa8.3□□□□□ -1.08
PDPN-210ENST00000513143 ZNF22P17026 224 aaPredicted RBP8.3□□□□□ -1.08
PDPN-210ENST00000513143 C5orf38Q86SI9 138 aa8.3□□□□□ -1.08
PDPN-210ENST00000513143 LINC00469Q8N7U9 141 aa8.3□□□□□ -1.08
PDPN-210ENST00000513143 PSCAO43653 123 aa8.29□□□□□ -1.08
PDPN-210ENST00000513143 LINC01561Q8N1V8 128 aa8.29□□□□□ -1.08
PDPN-210ENST00000513143 RYR2Q92736 4967 aa8.29□□□□□ -1.08
PDPN-210ENST00000513143 H3BRM9 83 aa8.29□□□□□ -1.08
PDPN-210ENST00000513143 AKR1D1P51857 326 aa8.29□□□□□ -1.08
PDPN-210ENST00000513143 TMEM170BQ5T4T1 132 aa8.29□□□□□ -1.08
PDPN-210ENST00000513143 RTL8CO15255 209 aa8.28□□□□□ -1.08
PDPN-210ENST00000513143 MALP21145 153 aa8.28□□□□□ -1.08
PDPN-210ENST00000513143 DNAH17Q9UFH2 4485 aa8.27□□□□□ -1.09
PDPN-210ENST00000513143 IGHV1-58A0A0C4DH39 117 aa8.27□□□□□ -1.09
PDPN-210ENST00000513143 TMEM223A0PJW6 202 aa8.27□□□□□ -1.09
PDPN-210ENST00000513143 LRCOL1A6NCL2 159 aa8.27□□□□□ -1.09
PDPN-210ENST00000513143 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.27□□□□□ -1.09
PDPN-210ENST00000513143 SMIM1B2RUZ4 78 aa8.27□□□□□ -1.09
PDPN-210ENST00000513143 APOMO95445 188 aa8.27□□□□□ -1.09
PDPN-210ENST00000513143 SCGB1D1O95968 90 aa8.27□□□□□ -1.09
PDPN-210ENST00000513143 JOSD1Q15040 202 aaPredicted RBP8.27□□□□□ -1.09
PDPN-210ENST00000513143 CFAP161Q6P656 301 aa8.27□□□□□ -1.09
PDPN-210ENST00000513143 IGHV3-64A0A075B6Q5 118 aa8.26□□□□□ -1.09
PDPN-210ENST00000513143 LOC105371267A0A1B0GV96 52 aa8.26□□□□□ -1.09
PDPN-210ENST00000513143 USP17L23D6RBM5 183 aa8.26□□□□□ -1.09
PDPN-210ENST00000513143 SPINK8P0C7L1 97 aa8.26□□□□□ -1.09
PDPN-210ENST00000513143 WFDC2Q14508 124 aa8.26□□□□□ -1.09
PDPN-210ENST00000513143 C15orf56Q8N910 161 aa8.26□□□□□ -1.09
PDPN-210ENST00000513143 KRTAP9-2Q9BYQ4 174 aa8.26□□□□□ -1.09
PDPN-210ENST00000513143 ATOH7Q8N100 152 aa8.25□□□□□ -1.09
PDPN-210ENST00000513143 GVQW2A0A096LPI5 108 aaPredicted RBP8.24□□□□□ -1.09
PDPN-210ENST00000513143 IGLV5-39A0A0G2JS06 123 aa8.24□□□□□ -1.09
PDPN-210ENST00000513143 LECT2O14960 151 aa8.24□□□□□ -1.09
PDPN-210ENST00000513143 PYY3Q5JQD4 70 aa8.24□□□□□ -1.09
PDPN-210ENST00000513143 ORAOV1Q8WV07 137 aa8.24□□□□□ -1.09
PDPN-210ENST00000513143 FRAS1Q86XX4 4008 aa8.24□□□□□ -1.09
PDPN-210ENST00000513143 A0A087WTM6 91 aa8.23□□□□□ -1.09
PDPN-210ENST00000513143 HERVK_113P61574 105 aa8.23□□□□□ -1.09
PDPN-210ENST00000513143 TNP2Q05952 138 aa8.23□□□□□ -1.09
PDPN-210ENST00000513143 KIAA0087Q14695 138 aa8.23□□□□□ -1.09
PDPN-210ENST00000513143 STPG4Q8N801 248 aa8.23□□□□□ -1.09
PDPN-210ENST00000513143 KRTAP9-6A0A140TA67 174 aa8.22□□□□□ -1.09
PDPN-210ENST00000513143 SPAG11BQ08648 103 aa8.22□□□□□ -1.09
PDPN-210ENST00000513143 HIGD2BQ4VC39 106 aa8.22□□□□□ -1.09
PDPN-210ENST00000513143 C14orf177Q52M58 125 aa8.22□□□□□ -1.09
PDPN-210ENST00000513143 hDV102S1A0JD36 115 aa8.21□□□□□ -1.1
PDPN-210ENST00000513143 E9PLD3 99 aa8.21□□□□□ -1.1
PDPN-210ENST00000513143 LEPROTO15243 131 aa8.21□□□□□ -1.1
PDPN-210ENST00000513143 LINC00336Q6ZUF6 198 aa8.21□□□□□ -1.1
PDPN-210ENST00000513143 Q8IZM0 81 aa8.21□□□□□ -1.1
PDPN-210ENST00000513143 COX7B2Q8TF08 81 aa8.21□□□□□ -1.1
PDPN-210ENST00000513143 ZNF561-AS1K7EIQ3 104 aa8.2□□□□□ -1.1
PDPN-210ENST00000513143 PRSS2P07478 247 aa8.2□□□□□ -1.1
PDPN-210ENST00000513143 MAJINQ3KP22 176 aa8.2□□□□□ -1.1
PDPN-210ENST00000513143 Q8N814 137 aa8.2□□□□□ -1.1
PDPN-210ENST00000513143 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
PDPN-210ENST00000513143 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
PDPN-210ENST00000513143 TOMM7Q9P0U1 55 aa8.2□□□□□ -1.1
PDPN-210ENST00000513143 RYR3Q15413 4870 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms