RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 FCER1GP30273 86 aa8.71□□□□□ -1.02
SPCS3-204ENST00000513139 RPL32P62910 135 aaKnown RBP8.71□□□□□ -1.02
SPCS3-204ENST00000513139 MAP1LC3AQ9H492 121 aa8.71□□□□□ -1.02
SPCS3-204ENST00000513139 LAMTOR2Q9Y2Q5 125 aa8.71□□□□□ -1.02
SPCS3-204ENST00000513139 LPAP08519 4548 aa8.7□□□□□ -1.02
SPCS3-204ENST00000513139 PRSS47A8MTI9 375 aa8.7□□□□□ -1.02
SPCS3-204ENST00000513139 ESDP10768 282 aa8.7□□□□□ -1.02
SPCS3-204ENST00000513139 S100A1P23297 94 aa8.7□□□□□ -1.02
SPCS3-204ENST00000513139 REG3AQ06141 175 aa8.7□□□□□ -1.02
SPCS3-204ENST00000513139 KIR2DL4Q99706 377 aa8.7□□□□□ -1.02
SPCS3-204ENST00000513139 KRTAP9-2Q9BYQ4 174 aa8.7□□□□□ -1.02
SPCS3-204ENST00000513139 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
SPCS3-204ENST00000513139 IFI27P40305 119 aaPredicted RBP8.69□□□□□ -1.02
SPCS3-204ENST00000513139 IGLV4-60A0A075B6I1 120 aa8.68□□□□□ -1.02
SPCS3-204ENST00000513139 UBE2L6O14933 153 aa8.68□□□□□ -1.02
SPCS3-204ENST00000513139 Q8N8P6 123 aa8.68□□□□□ -1.02
SPCS3-204ENST00000513139 FGF6P10767 208 aa8.67□□□□□ -1.02
SPCS3-204ENST00000513139 RAB5AP20339 215 aa8.67□□□□□ -1.02
SPCS3-204ENST00000513139 COX6A2Q02221 97 aa8.67□□□□□ -1.02
SPCS3-204ENST00000513139 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
SPCS3-204ENST00000513139 TRGC2P03986 189 aa8.66□□□□□ -1.02
SPCS3-204ENST00000513139 RPL39P62891 51 aaKnown RBP8.66□□□□□ -1.02
SPCS3-204ENST00000513139 MAJINQ3KP22 176 aa8.66□□□□□ -1.02
SPCS3-204ENST00000513139 RNASEKQ6P5S7 137 aaKnown RBP8.66□□□□□ -1.02
SPCS3-204ENST00000513139 C20orf203Q8NBC4 194 aa8.66□□□□□ -1.02
SPCS3-204ENST00000513139 PRSS3P2Q8NHM4 247 aa8.66□□□□□ -1.02
SPCS3-204ENST00000513139 A0A1B0GUV1 79 aa8.65□□□□□ -1.02
SPCS3-204ENST00000513139 H7C423 109 aa8.65□□□□□ -1.02
SPCS3-204ENST00000513139 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.02
SPCS3-204ENST00000513139 STPG4Q8N801 248 aa8.65□□□□□ -1.02
SPCS3-204ENST00000513139 NXT2Q9NPJ8 142 aaKnown RBP8.65□□□□□ -1.02
SPCS3-204ENST00000513139 CFAP161Q6P656 301 aa8.64□□□□□ -1.03
SPCS3-204ENST00000513139 C18orf32Q8TCD1 76 aa8.64□□□□□ -1.03
SPCS3-204ENST00000513139 LOC100996750A0A140TA64 210 aa8.63□□□□□ -1.03
SPCS3-204ENST00000513139 C15orf56Q8N910 161 aa8.63□□□□□ -1.03
SPCS3-204ENST00000513139 URB1-AS1Q96HZ7 61 aa8.63□□□□□ -1.03
SPCS3-204ENST00000513139 KRTAP4-6Q9BYQ5 205 aa8.63□□□□□ -1.03
SPCS3-204ENST00000513139 UBE2D4Q9Y2X8 147 aa8.63□□□□□ -1.03
SPCS3-204ENST00000513139 IGKV2-24A0A0C4DH68 120 aa8.62□□□□□ -1.03
SPCS3-204ENST00000513139 Q6ZRP5 223 aa8.62□□□□□ -1.03
SPCS3-204ENST00000513139 MRPL52Q86TS9 123 aaKnown RBP8.62□□□□□ -1.03
SPCS3-204ENST00000513139 OR5A1Q8NGJ0 315 aa8.62□□□□□ -1.03
SPCS3-204ENST00000513139 TMEM101Q96IK0 257 aa8.62□□□□□ -1.03
SPCS3-204ENST00000513139 OPRPNQ99935 248 aaPredicted RBP8.62□□□□□ -1.03
SPCS3-204ENST00000513139 LINC00474Q9P2X8 69 aa8.62□□□□□ -1.03
SPCS3-204ENST00000513139 IGKV3OR2-268A0A0C4DH90 116 aa8.61□□□□□ -1.03
SPCS3-204ENST00000513139 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
SPCS3-204ENST00000513139 ORMDL2Q53FV1 153 aa8.61□□□□□ -1.03
SPCS3-204ENST00000513139 RNASE13Q5GAN3 156 aaKnown RBP8.61□□□□□ -1.03
SPCS3-204ENST00000513139 FA2HQ7L5A8 372 aa8.61□□□□□ -1.03
SPCS3-204ENST00000513139 FAM104AQ969W3 186 aa8.61□□□□□ -1.03
SPCS3-204ENST00000513139 TMEM18Q96B42 140 aa8.61□□□□□ -1.03
SPCS3-204ENST00000513139 CDC42SE2Q9NRR3 84 aa8.61□□□□□ -1.03
SPCS3-204ENST00000513139 A0A0U1RQV1 116 aa8.6□□□□□ -1.03
SPCS3-204ENST00000513139 K7EMI3 77 aa8.6□□□□□ -1.03
SPCS3-204ENST00000513139 LINC00614P0C842 121 aa8.6□□□□□ -1.03
SPCS3-204ENST00000513139 ZNF25P17030 456 aaPredicted RBP8.6□□□□□ -1.03
SPCS3-204ENST00000513139 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
SPCS3-204ENST00000513139 ZNF664Q8N3J9 261 aa8.6□□□□□ -1.03
SPCS3-204ENST00000513139 MUC2Q02817 5179 aa8.59□□□□□ -1.03
SPCS3-204ENST00000513139 A0A096LNI7 61 aa8.59□□□□□ -1.03
SPCS3-204ENST00000513139 Q6ZUT4 128 aa8.59□□□□□ -1.03
SPCS3-204ENST00000513139 TIMM21Q9BVV7 248 aa8.59□□□□□ -1.03
SPCS3-204ENST00000513139 CYSLTR1Q9Y271 337 aa8.59□□□□□ -1.03
SPCS3-204ENST00000513139 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
SPCS3-204ENST00000513139 LINC00310P59036 64 aa8.58□□□□□ -1.04
SPCS3-204ENST00000513139 PMCHL1Q16048 86 aa8.58□□□□□ -1.04
SPCS3-204ENST00000513139 SPANXA1Q9NS26 97 aa8.58□□□□□ -1.04
SPCS3-204ENST00000513139 CSDC2Q9Y534 153 aaKnown RBP8.58□□□□□ -1.04
SPCS3-204ENST00000513139 SMAGPQ0VAQ4 97 aa8.57□□□□□ -1.04
SPCS3-204ENST00000513139 BAGE3Q86Y29 109 aa8.57□□□□□ -1.04
SPCS3-204ENST00000513139 TOMM6Q96B49 74 aa8.57□□□□□ -1.04
SPCS3-204ENST00000513139 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
SPCS3-204ENST00000513139 GVQW2A0A096LPI5 108 aaPredicted RBP8.56□□□□□ -1.04
SPCS3-204ENST00000513139 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
SPCS3-204ENST00000513139 GAGE12HA6NDE8 117 aa8.56□□□□□ -1.04
SPCS3-204ENST00000513139 IGIPA6NJ69 53 aa8.56□□□□□ -1.04
SPCS3-204ENST00000513139 HIGD2BQ4VC39 106 aa8.56□□□□□ -1.04
SPCS3-204ENST00000513139 ZC2HC1BQ5TFG8 222 aa8.56□□□□□ -1.04
SPCS3-204ENST00000513139 PSORS1C2Q9UIG4 136 aa8.56□□□□□ -1.04
SPCS3-204ENST00000513139 PYGO1Q9Y3Y4 419 aa8.56□□□□□ -1.04
SPCS3-204ENST00000513139 A0A096LNJ9 63 aa8.55□□□□□ -1.04
SPCS3-204ENST00000513139 LINC00959A0A1B0GUT2 108 aa8.55□□□□□ -1.04
SPCS3-204ENST00000513139 RAB5BP61020 215 aa8.55□□□□□ -1.04
SPCS3-204ENST00000513139 MRPS36P82909 103 aaKnown RBP8.55□□□□□ -1.04
SPCS3-204ENST00000513139 SCGB3A1Q96QR1 104 aa8.55□□□□□ -1.04
SPCS3-204ENST00000513139 TRAV13-1A0A0B4J241 112 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 NUPR1O60356 82 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST1H2BKO60814 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST1H2BJP06899 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST1H2BOP23527 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 G0S2P27469 103 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST1H2BBP33778 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST1H2BDP58876 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST1H2BCP62807 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST2H2BEQ16778 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.54□□□□□ -1.04
SPCS3-204ENST00000513139 CHCHD10Q8WYQ3 142 aaPredicted RBP8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST1H2BHQ93079 126 aa8.54□□□□□ -1.04
SPCS3-204ENST00000513139 HIST1H2BNQ99877 126 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms