RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MT2AP02795 61 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 UCHL1P09936 223 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 OR10J4P0C629 311 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 P0C880 135 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 DEFA1P59665 94 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 COX6A2Q02221 97 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 ELOBQ15370 118 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 RHEBQ15382 184 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 KRTAP5-10Q6L8G5 202 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 EIF4E3Q8N5X7 224 aaKnown RBP1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 SMCR5Q8TEV8 140 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 PLEKHB2Q96CS7 222 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 TVP23CQ96ET8 276 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 DNAJC30Q96LL9 226 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 MIEN1Q9BRT3 115 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 IL36BQ9NZH7 164 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 LAMTOR3Q9UHA4 124 aa1.65□□□□□ -2.15
TOPBP1-208ENST00000511439 H3BPC8 53 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 SYNGR2O43760 224 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 IGKV1-5P01602 117 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 CRPP02741 224 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 SMIM17P0DL12 118 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 SPRR2DP22532 72 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 ZNF93P35789 620 aaPredicted RBP1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 XCL1P47992 114 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 GTF2A1P52655 376 aaPredicted RBP1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 PIGPP57054 158 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 MIAQ16674 131 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 TMEM128Q5BJH2 165 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 AADACL3Q5VUY0 350 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 CLVS1Q8IUQ0 354 aaPredicted RBP1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 OR51A4Q8NGJ6 313 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 DERL1Q9BUN8 251 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 HIGD2AQ9BW72 106 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 TXNL4BQ9NX01 149 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 SPANXCQ9NY87 97 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 CYSLTR1Q9Y271 337 aa1.64□□□□□ -2.15
TOPBP1-208ENST00000511439 IGLV10-54A0A075B6I4 117 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 A0A1W2PNN7 141 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 FABP5P3A8MUU1 101 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 LEPROTO15243 131 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 FAM107AO95990 144 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 IGLV6-57P01721 117 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 MT1FP04733 61 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 HMGN1P05114 100 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 SFTA3P0C7M3 94 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 GZMBP10144 247 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 S100A4P26447 101 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 YPEL3P61236 119 aaPredicted RBP1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 EIF5AP63241 154 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 HIST1H1AQ02539 215 aaPredicted RBP1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 PACRGLQ8N7B6 248 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 NUP35Q8NFH5 326 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 OR8J3Q8NGG0 315 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 OR10D4PQ8NGN7 298 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 TSKUQ8WUA8 353 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 CCDC32Q9BV29 185 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 NDUFA4L2Q9NRX3 87 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 MRPL16Q9NX20 251 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 R4GN34 69 aa1.63□□□□□ -2.15
TOPBP1-208ENST00000511439 TRAV30A0A087WSZ9 112 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 A0A087WX48 190 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 DUXBA0A1W2PPF3 345 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 A0A1W2PRE2 83 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 C19orf71A6NCJ1 209 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 NFYAP23511 347 aaPredicted RBP1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 PPP3R1P63098 170 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 MEF2BQ02080 365 aaPredicted RBP1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 SMCO1Q147U7 214 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 SURF2Q15527 256 aaPredicted RBP1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 C2orf91Q6ZV80 131 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 LCA10Q71F78 164 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 KTN1-AS1Q86SY8 53 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 OR10J5Q8NHC4 309 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 SLC39A9Q9NUM3 307 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 GNG8Q9UK08 70 aa1.62□□□□□ -2.15
TOPBP1-208ENST00000511439 A0A096LNI7 61 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 CORTO00230 105 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 HRES1P13985 223 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 ZNF22P17026 224 aaPredicted RBP1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 SUPT4H1P63272 117 aaKnown RBP1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 PCOTHQ58A44 107 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 MIR17HGQ75NE6 70 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 CROCCP2Q86T23 111 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 MBD3L1Q8WWY6 194 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 MAFIPQ8WZ33 124 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 SCGB3A1Q96QR1 104 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 GINS4Q9BRT9 223 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 PRADC1Q9BSG0 188 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 TTTY13Q9BZ97 58 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 BANF2Q9H503 90 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 TMEM138Q9NPI0 162 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 TAS2R4Q9NYW5 299 aa1.61□□□□□ -2.15
TOPBP1-208ENST00000511439 A0A087WWC5 75 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 TRAV12-3A0A0B4J271 114 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 ZNF73O43830 326 aaPredicted RBP1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 PPBPP02775 128 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 DEFA3P59666 94 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 RHOHQ15669 191 aa1.6□□□□□ -2.15
TOPBP1-208ENST00000511439 KRTAP25-1Q3LHN0 102 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms