RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 CHCHD1Q96BP2 118 aaKnown RBP7.72□□□□□ -1.17
CHFR-208ENST00000511001 ALKBH7Q9BT30 221 aaPredicted RBP7.72□□□□□ -1.17
CHFR-208ENST00000511001 VAMP8Q9BV40 100 aa7.72□□□□□ -1.17
CHFR-208ENST00000511001 AMMECR1LQ6DCA0 310 aa7.71□□□□□ -1.18
CHFR-208ENST00000511001 MRAP2Q96G30 205 aa7.71□□□□□ -1.18
CHFR-208ENST00000511001 ST20Q9HBF5 79 aa7.71□□□□□ -1.18
CHFR-208ENST00000511001 FAT3Q8TDW7 4589 aa7.71□□□□□ -1.18
CHFR-208ENST00000511001 LRP1Q07954 4544 aaKnown RBP7.7□□□□□ -1.18
CHFR-208ENST00000511001 TRBV27A0A0K0K1C4 114 aa7.7□□□□□ -1.18
CHFR-208ENST00000511001 SMKR1H3BMG3 65 aa7.7□□□□□ -1.18
CHFR-208ENST00000511001 ZNF25P17030 456 aaPredicted RBP7.7□□□□□ -1.18
CHFR-208ENST00000511001 RIGQ13278 110 aa7.7□□□□□ -1.18
CHFR-208ENST00000511001 CIRBPQ14011 172 aaKnown RBP7.7□□□□□ -1.18
CHFR-208ENST00000511001 CHCHD10Q8WYQ3 142 aaPredicted RBP7.7□□□□□ -1.18
CHFR-208ENST00000511001 KRTAP29-1A8MX34 341 aaPredicted RBP7.69□□□□□ -1.18
CHFR-208ENST00000511001 HSBP1O75506 76 aa7.69□□□□□ -1.18
CHFR-208ENST00000511001 NRACQ8N912 160 aa7.69□□□□□ -1.18
CHFR-208ENST00000511001 OR5A1Q8NGJ0 315 aa7.69□□□□□ -1.18
CHFR-208ENST00000511001 AP5S1Q9NUS5 200 aa7.69□□□□□ -1.18
CHFR-208ENST00000511001 FOXI1Q12951 378 aa7.68□□□□□ -1.18
CHFR-208ENST00000511001 IGHV3-64A0A075B6Q5 118 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 LINC00959A0A1B0GUT2 108 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 C3orf79P0CE67 100 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 CHTF8P0CG12 524 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 KRTDAPP60985 99 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 RPL37AP61513 92 aaKnown RBP7.67□□□□□ -1.18
CHFR-208ENST00000511001 KIAA1644Q3SXP7 199 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 MRPL51Q4U2R6 128 aaKnown RBP7.67□□□□□ -1.18
CHFR-208ENST00000511001 HIGD2BQ4VC39 106 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 FAM104BQ5XKR9 115 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 CFAP161Q6P656 301 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 SNHG12Q9BXW3 62 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 UQCR10Q9UDW1 63 aa7.67□□□□□ -1.18
CHFR-208ENST00000511001 GVQW2A0A096LPI5 108 aaPredicted RBP7.66□□□□□ -1.18
CHFR-208ENST00000511001 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.66□□□□□ -1.18
CHFR-208ENST00000511001 HNRNPA3P51991 378 aaKnown RBP7.66□□□□□ -1.18
CHFR-208ENST00000511001 SUMO2P61956 95 aaKnown RBP7.66□□□□□ -1.18
CHFR-208ENST00000511001 CDC42SE2Q9NRR3 84 aa7.66□□□□□ -1.18
CHFR-208ENST00000511001 A0A1B0GV90 55 aa7.65□□□□□ -1.18
CHFR-208ENST00000511001 VCYO14598 125 aa7.65□□□□□ -1.18
CHFR-208ENST00000511001 CCL25O15444 150 aa7.65□□□□□ -1.18
CHFR-208ENST00000511001 XCL1P47992 114 aa7.65□□□□□ -1.18
CHFR-208ENST00000511001 SPACA4Q8TDM5 124 aa7.65□□□□□ -1.18
CHFR-208ENST00000511001 TMEM101Q96IK0 257 aa7.65□□□□□ -1.18
CHFR-208ENST00000511001 A0A087WYN8 130 aa7.64□□□□□ -1.19
CHFR-208ENST00000511001 PPP1R17O96001 155 aa7.64□□□□□ -1.19
CHFR-208ENST00000511001 IGLC3P0DOY3 106 aa7.64□□□□□ -1.19
CHFR-208ENST00000511001 CAMPP49913 170 aa7.64□□□□□ -1.19
CHFR-208ENST00000511001 PRSS3P2Q8NHM4 247 aa7.64□□□□□ -1.19
CHFR-208ENST00000511001 PAM16Q9Y3D7 125 aa7.64□□□□□ -1.19
CHFR-208ENST00000511001 COX6A2Q02221 97 aa7.63□□□□□ -1.19
CHFR-208ENST00000511001 SPATA45Q537H7 98 aa7.63□□□□□ -1.19
CHFR-208ENST00000511001 LCE2DQ5TA82 110 aaPredicted RBP7.63□□□□□ -1.19
CHFR-208ENST00000511001 PET117Q6UWS5 81 aa7.63□□□□□ -1.19
CHFR-208ENST00000511001 HSPB8Q9UJY1 196 aa7.63□□□□□ -1.19
CHFR-208ENST00000511001 UBE2D4Q9Y2X8 147 aa7.63□□□□□ -1.19
CHFR-208ENST00000511001 CSDC2Q9Y534 153 aaKnown RBP7.63□□□□□ -1.19
CHFR-208ENST00000511001 IGHV1-58A0A0C4DH39 117 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 TCAPO15273 167 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 LINC00614P0C842 121 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 FCER1GP30273 86 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 RPL32P62910 135 aaKnown RBP7.62□□□□□ -1.19
CHFR-208ENST00000511001 SS18Q15532 418 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 COL5A1-AS1Q5SY13 56 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 CD164L2Q6UWJ8 174 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 LINC00526Q96FQ7 95 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 URB1-AS1Q96HZ7 61 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 PLAC8Q9NZF1 115 aa7.62□□□□□ -1.19
CHFR-208ENST00000511001 TNFRSF6BO95407 300 aa7.61□□□□□ -1.19
CHFR-208ENST00000511001 OXTP01178 125 aa7.61□□□□□ -1.19
CHFR-208ENST00000511001 RNASE13Q5GAN3 156 aaKnown RBP7.61□□□□□ -1.19
CHFR-208ENST00000511001 FAM19A2Q8N3H0 131 aa7.61□□□□□ -1.19
CHFR-208ENST00000511001 KIR2DL4Q99706 377 aa7.61□□□□□ -1.19
CHFR-208ENST00000511001 C20orf78Q9BR46 151 aa7.61□□□□□ -1.19
CHFR-208ENST00000511001 LAMTOR2Q9Y2Q5 125 aa7.61□□□□□ -1.19
CHFR-208ENST00000511001 SYS1-DBNDD2H3BUS1 97 aa7.6□□□□□ -1.19
CHFR-208ENST00000511001 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
CHFR-208ENST00000511001 NPYP01303 97 aa7.6□□□□□ -1.19
CHFR-208ENST00000511001 CKS2P33552 79 aa7.6□□□□□ -1.19
CHFR-208ENST00000511001 Q6ZUT4 128 aa7.6□□□□□ -1.19
CHFR-208ENST00000511001 FAM104AQ969W3 186 aa7.6□□□□□ -1.19
CHFR-208ENST00000511001 TIMM21Q9BVV7 248 aa7.6□□□□□ -1.19
CHFR-208ENST00000511001 A0A096LNI7 61 aa7.59□□□□□ -1.19
CHFR-208ENST00000511001 IGKV2-24A0A0C4DH68 120 aa7.59□□□□□ -1.19
CHFR-208ENST00000511001 D6R8Y8 96 aa7.59□□□□□ -1.19
CHFR-208ENST00000511001 PPBPP02775 128 aa7.59□□□□□ -1.19
CHFR-208ENST00000511001 RPL39P62891 51 aaKnown RBP7.59□□□□□ -1.19
CHFR-208ENST00000511001 DPH3Q96FX2 82 aa7.59□□□□□ -1.19
CHFR-208ENST00000511001 SMIM2Q9BVW6 85 aa7.59□□□□□ -1.19
CHFR-208ENST00000511001 MAP1LC3CQ9BXW4 147 aa7.59□□□□□ -1.19
CHFR-208ENST00000511001 LINC01546A6NGU7 62 aa7.58□□□□□ -1.2
CHFR-208ENST00000511001 SMAGPQ0VAQ4 97 aa7.58□□□□□ -1.2
CHFR-208ENST00000511001 MAJINQ3KP22 176 aa7.58□□□□□ -1.2
CHFR-208ENST00000511001 SERTAD4-AS1Q5TG53 156 aa7.58□□□□□ -1.2
CHFR-208ENST00000511001 LINC01545Q5VT33 79 aa7.58□□□□□ -1.2
CHFR-208ENST00000511001 CARD19Q96LW7 228 aa7.58□□□□□ -1.2
CHFR-208ENST00000511001 PMCHL2Q9BQD1 86 aa7.58□□□□□ -1.2
CHFR-208ENST00000511001 TRAV13-1A0A0B4J241 112 aa7.57□□□□□ -1.2
CHFR-208ENST00000511001 Q6ZN92 141 aa7.57□□□□□ -1.2
CHFR-208ENST00000511001 ORMDL3Q8N138 153 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms