RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 MT-ND6P03923 174 aa6.38□□□□□ -1.39
DDX41-211ENST00000510171 RNASE13Q5GAN3 156 aaKnown RBP6.38□□□□□ -1.39
DDX41-211ENST00000510171 Q6ZUT4 128 aa6.38□□□□□ -1.39
DDX41-211ENST00000510171 ORMDL3Q8N138 153 aa6.38□□□□□ -1.39
DDX41-211ENST00000510171 C2orf48Q96LS8 159 aa6.38□□□□□ -1.39
DDX41-211ENST00000510171 PSORS1C2Q9UIG4 136 aa6.38□□□□□ -1.39
DDX41-211ENST00000510171 MRPS36P82909 103 aaKnown RBP6.37□□□□□ -1.39
DDX41-211ENST00000510171 PNRC1Q12796 327 aaPredicted RBP6.37□□□□□ -1.39
DDX41-211ENST00000510171 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
DDX41-211ENST00000510171 OR10D4PQ8NGN7 298 aa6.37□□□□□ -1.39
DDX41-211ENST00000510171 CAMK2N2Q96S95 79 aa6.37□□□□□ -1.39
DDX41-211ENST00000510171 F8WDY8 70 aa6.36□□□□□ -1.39
DDX41-211ENST00000510171 NPYP01303 97 aa6.36□□□□□ -1.39
DDX41-211ENST00000510171 RAB5AP20339 215 aa6.36□□□□□ -1.39
DDX41-211ENST00000510171 RAB14P61106 215 aa6.36□□□□□ -1.39
DDX41-211ENST00000510171 RPL39P62891 51 aaKnown RBP6.36□□□□□ -1.39
DDX41-211ENST00000510171 C1orf137Q5JT78 98 aa6.36□□□□□ -1.39
DDX41-211ENST00000510171 C5orf38Q86SI9 138 aa6.36□□□□□ -1.39
DDX41-211ENST00000510171 LAMTOR2Q9Y2Q5 125 aa6.36□□□□□ -1.39
DDX41-211ENST00000510171 MT-ND4LP03901 98 aa6.35□□□□□ -1.39
DDX41-211ENST00000510171 RNF151Q2KHN1 245 aa6.35□□□□□ -1.39
DDX41-211ENST00000510171 TMEM136Q6ZRR5 245 aa6.35□□□□□ -1.39
DDX41-211ENST00000510171 PRR26Q8N8Z3 221 aa6.35□□□□□ -1.39
DDX41-211ENST00000510171 DIRC1Q969H9 104 aa6.35□□□□□ -1.39
DDX41-211ENST00000510171 ANAPC16Q96DE5 110 aa6.35□□□□□ -1.39
DDX41-211ENST00000510171 PRELID3AQ96N28 172 aa6.35□□□□□ -1.39
DDX41-211ENST00000510171 IGHV3OR16-9A0A0B4J2B5 98 aa6.34□□□□□ -1.39
DDX41-211ENST00000510171 IFITM10A6NMD0 228 aa6.34□□□□□ -1.39
DDX41-211ENST00000510171 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.34□□□□□ -1.39
DDX41-211ENST00000510171 IFI27P40305 119 aaPredicted RBP6.34□□□□□ -1.39
DDX41-211ENST00000510171 SPAG11BQ08648 103 aa6.34□□□□□ -1.39
DDX41-211ENST00000510171 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
DDX41-211ENST00000510171 FAM104AQ969W3 186 aa6.34□□□□□ -1.39
DDX41-211ENST00000510171 PYGO1Q9Y3Y4 419 aa6.34□□□□□ -1.39
DDX41-211ENST00000510171 PRSS47A8MTI9 375 aa6.33□□□□□ -1.4
DDX41-211ENST00000510171 IGLV7-43P04211 117 aa6.33□□□□□ -1.4
DDX41-211ENST00000510171 RPL18AQ02543 176 aaKnown RBP6.33□□□□□ -1.4
DDX41-211ENST00000510171 ORAOV1Q8WV07 137 aa6.33□□□□□ -1.4
DDX41-211ENST00000510171 OPRPNQ99935 248 aaPredicted RBP6.33□□□□□ -1.4
DDX41-211ENST00000510171 MRPL35Q9NZE8 188 aaKnown RBP6.33□□□□□ -1.4
DDX41-211ENST00000510171 A0A087WZ39 114 aa6.32□□□□□ -1.4
DDX41-211ENST00000510171 TGIF2-C20orf24A0A0A6YYL0 155 aa6.32□□□□□ -1.4
DDX41-211ENST00000510171 NDUFA1O15239 70 aa6.32□□□□□ -1.4
DDX41-211ENST00000510171 IMMP2LQ96T52 175 aa6.32□□□□□ -1.4
DDX41-211ENST00000510171 MAP1LC3AQ9H492 121 aa6.32□□□□□ -1.4
DDX41-211ENST00000510171 K7EMI3 77 aa6.31□□□□□ -1.4
DDX41-211ENST00000510171 TMEM141Q96I45 108 aa6.31□□□□□ -1.4
DDX41-211ENST00000510171 IGLV1-50A0A075B6I6 118 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 IGLV4-3A0A075B6K6 122 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 LOC389332A0A1B0GUA5 103 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 H0Y9J4 135 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 NPSP0C0P6 89 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 ORMDL2Q53FV1 153 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 Q6ZN92 141 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 TEX43Q6ZNM6 134 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 Q8N8P6 123 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 C2orf88Q9BSF0 95 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 CYSLTR1Q9Y271 337 aa6.3□□□□□ -1.4
DDX41-211ENST00000510171 TLX1NBP0CAT3 122 aa6.29□□□□□ -1.4
DDX41-211ENST00000510171 G0S2P27469 103 aa6.29□□□□□ -1.4
DDX41-211ENST00000510171 PRR4Q16378 134 aa6.29□□□□□ -1.4
DDX41-211ENST00000510171 CLLU1Q5K131 121 aa6.29□□□□□ -1.4
DDX41-211ENST00000510171 LINC00242Q5T6M2 205 aa6.29□□□□□ -1.4
DDX41-211ENST00000510171 C2orf66Q6UXQ4 117 aa6.29□□□□□ -1.4
DDX41-211ENST00000510171 LPAP08519 4548 aa6.29□□□□□ -1.4
DDX41-211ENST00000510171 LINC01561Q8N1V8 128 aa6.28□□□□□ -1.4
DDX41-211ENST00000510171 CTDSP1Q9GZU7 261 aa6.28□□□□□ -1.4
DDX41-211ENST00000510171 NXT2Q9NPJ8 142 aaKnown RBP6.28□□□□□ -1.4
DDX41-211ENST00000510171 TRBV30A0A0K0K1B3 111 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 A0A0U1RQV1 116 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 FAM168BA1KXE4 195 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 UBE2D1P51668 147 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 PAPPA-AS1Q5QFB9 102 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 C10orf25Q5T742 122 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 UQCC3Q6UW78 93 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 UNQ6190/PRO20217Q6UXQ8 127 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 KRTAP11-1Q8IUC1 163 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 VCX2Q9H322 139 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 C6orf48Q9UBA6 75 aa6.27□□□□□ -1.41
DDX41-211ENST00000510171 TRAV9-1A0A075B6T8 112 aa6.26□□□□□ -1.41
DDX41-211ENST00000510171 KRTAP1-4P0C5Y4 121 aa6.26□□□□□ -1.41
DDX41-211ENST00000510171 KIAA0087Q14695 138 aa6.26□□□□□ -1.41
DDX41-211ENST00000510171 AMELXQ99217 191 aa6.26□□□□□ -1.41
DDX41-211ENST00000510171 IGIPA6NJ69 53 aa6.25□□□□□ -1.41
DDX41-211ENST00000510171 RPL13AP40429 203 aaKnown RBP6.25□□□□□ -1.41
DDX41-211ENST00000510171 SEC11AP67812 179 aa6.25□□□□□ -1.41
DDX41-211ENST00000510171 GAGE2EQ4V326 116 aa6.25□□□□□ -1.41
DDX41-211ENST00000510171 LINC00173Q6ZV60 143 aa6.25□□□□□ -1.41
DDX41-211ENST00000510171 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
DDX41-211ENST00000510171 FAM19A3Q7Z5A8 133 aa6.25□□□□□ -1.41
DDX41-211ENST00000510171 PACRGQ96M98 296 aaPredicted RBP6.25□□□□□ -1.41
DDX41-211ENST00000510171 GAGE2DQ9UEU5 116 aa6.25□□□□□ -1.41
DDX41-211ENST00000510171 NDUFC2-KCTD14E9PQ53 114 aa6.24□□□□□ -1.41
DDX41-211ENST00000510171 PRSS2P07478 247 aa6.24□□□□□ -1.41
DDX41-211ENST00000510171 HERVK_113P63121 156 aa6.24□□□□□ -1.41
DDX41-211ENST00000510171 UBE2BP63146 152 aa6.24□□□□□ -1.41
DDX41-211ENST00000510171 TIMM17AQ99595 171 aa6.24□□□□□ -1.41
DDX41-211ENST00000510171 KRTAP9-2Q9BYQ4 174 aa6.24□□□□□ -1.41
DDX41-211ENST00000510171 TMEM218A2RU14 115 aa6.23□□□□□ -1.41
DDX41-211ENST00000510171 LINC01549A6NIU2 74 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms