RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-223	ENST00000509900	MZT2B	Q6NZ67	158 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	MRPL55	Q7Z7F7	128 aa	Known RBP	5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	MRAP2	Q96G30	205 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	NKX6-2	Q9C056	277 aa	Predicted RBP	5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	CYTL1	Q9NRR1	136 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	NDUFA12	Q9UI09	145 aa		5.12	□□□□□ -1.59
PTPN20-223	ENST00000509900	TRBV30	A0A0K0K1B3	111 aa		5.11	□□□□□ -1.59
PTPN20-223	ENST00000509900	KIAA0087	Q14695	138 aa		5.11	□□□□□ -1.59
PTPN20-223	ENST00000509900	TRIQK	Q629K1	86 aa		5.11	□□□□□ -1.59
PTPN20-223	ENST00000509900	TP73-AS1	Q9UF72	201 aa		5.11	□□□□□ -1.59
PTPN20-223	ENST00000509900	IGHV3OR16-9	A0A0B4J2B5	98 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	INMT-MINDY4	F8WBC2	141 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900		I3L3M4	83 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	TRIAP1	O43715	76 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	ATP6V0C	P27449	155 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	AKR1C3	P42330	323 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	ZNF726P1	Q15940	193 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	C2orf82	Q6UX34	121 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900		Q8N377	158 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	LINC00469	Q8N7U9	141 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900		Q8NBF4	154 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	MARVELD1	Q9BSK0	173 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	ACTR3C	Q9C0K3	210 aa	Predicted RBP	5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	RNASE7	Q9H1E1	156 aa	Known RBP	5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	XAGE1A	Q9HD64	81 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	LINC00846	Q9NV44	126 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	TMEM242	Q9NWH2	141 aa		5.1	□□□□□ -1.59
PTPN20-223	ENST00000509900	CENPX	A8MT69	81 aa		5.09	□□□□□ -1.59
PTPN20-223	ENST00000509900	SPINK1	P00995	79 aa		5.09	□□□□□ -1.59
PTPN20-223	ENST00000509900	PMCH	P20382	165 aa		5.09	□□□□□ -1.59
PTPN20-223	ENST00000509900	FOXA3	P55318	350 aa	Predicted RBP	5.09	□□□□□ -1.59
PTPN20-223	ENST00000509900	LINC00167	Q96N53	147 aa		5.09	□□□□□ -1.59
PTPN20-223	ENST00000509900	NUDT15	Q9NV35	164 aa		5.09	□□□□□ -1.59
PTPN20-223	ENST00000509900	UPK1B	O75841	260 aa		5.08	□□□□□ -1.6
PTPN20-223	ENST00000509900	PRLH	P81277	87 aa		5.08	□□□□□ -1.6
PTPN20-223	ENST00000509900	PLEKHB2	Q96CS7	222 aa		5.08	□□□□□ -1.6
PTPN20-223	ENST00000509900	PSMG3	Q9BT73	122 aa	Predicted RBP	5.08	□□□□□ -1.6
PTPN20-223	ENST00000509900	C7orf77	A4D0Y5	90 aa		5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900	CCDC160	A6NGH7	325 aa		5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900	MB	P02144	154 aa		5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900	LYZL1	Q6UWQ5	148 aa		5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900		Q6ZUT4	128 aa		5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900	BAGE2	Q86Y30	109 aa		5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900	FAM19A2	Q8N3H0	131 aa		5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900	PPP1R1C	Q8WVI7	109 aa		5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900	CSDC2	Q9Y534	153 aa	Known RBP	5.07	□□□□□ -1.6
PTPN20-223	ENST00000509900	MUC12	Q9UKN1	5478 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	GAGE10	A6NGK3	116 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	ZNF727	A8MUV8	499 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900		F2Z2F3	143 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	PLA2G10	O15496	165 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	MT2A	P02795	61 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	SERF2	P84101	59 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	PNRC1	Q12796	327 aa	Predicted RBP	5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	STOML3	Q8TAV4	291 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	TCEAL7	Q9BRU2	100 aa		5.06	□□□□□ -1.6
PTPN20-223	ENST00000509900	MPC2	O95563	127 aa		5.05	□□□□□ -1.6
PTPN20-223	ENST00000509900	S100A5	P33763	92 aa		5.05	□□□□□ -1.6
PTPN20-223	ENST00000509900	TNFSF18	Q9UNG2	199 aa		5.05	□□□□□ -1.6
PTPN20-223	ENST00000509900	TRBV6-5	A0A0K0K1A5	114 aa		5.04	□□□□□ -1.6
PTPN20-223	ENST00000509900	CTXND1	A0A1B0GTU2	59 aa		5.04	□□□□□ -1.6
PTPN20-223	ENST00000509900	FHIT	P49789	147 aa		5.04	□□□□□ -1.6
PTPN20-223	ENST00000509900	CST9LP1	Q5W188	147 aa		5.04	□□□□□ -1.6
PTPN20-223	ENST00000509900	LYRM1	O43325	122 aa		5.03	□□□□□ -1.6
PTPN20-223	ENST00000509900	MT1F	P04733	61 aa		5.03	□□□□□ -1.6
PTPN20-223	ENST00000509900	S100A9	P06702	114 aa	Known RBP	5.03	□□□□□ -1.6
PTPN20-223	ENST00000509900	IL7	P13232	177 aa		5.03	□□□□□ -1.6
PTPN20-223	ENST00000509900	H2BFS	P57053	126 aa		5.03	□□□□□ -1.6
PTPN20-223	ENST00000509900	RPS20	P60866	119 aa	Known RBP	5.03	□□□□□ -1.6
PTPN20-223	ENST00000509900	RPS29	P62273	56 aa	Known RBP	5.03	□□□□□ -1.6
PTPN20-223	ENST00000509900	SLC25A20	O43772	301 aa		5.02	□□□□□ -1.61
PTPN20-223	ENST00000509900	POLR2K	P53803	58 aa	Known RBP	5.02	□□□□□ -1.61
PTPN20-223	ENST00000509900	RPL32	P62910	135 aa	Known RBP	5.02	□□□□□ -1.61
PTPN20-223	ENST00000509900	TWIST1	Q15672	202 aa		5.02	□□□□□ -1.61
PTPN20-223	ENST00000509900	TEX261	Q6UWH6	196 aa		5.02	□□□□□ -1.61
PTPN20-223	ENST00000509900	FAM104A	Q969W3	186 aa		5.02	□□□□□ -1.61
PTPN20-223	ENST00000509900	FAM210A	Q96ND0	272 aa		5.02	□□□□□ -1.61
PTPN20-223	ENST00000509900	CNFN	Q9BYD5	112 aa		5.02	□□□□□ -1.61
PTPN20-223	ENST00000509900	TRBV27	A0A0K0K1C4	114 aa		5.01	□□□□□ -1.61
PTPN20-223	ENST00000509900	C9orf92	A6NGG3	77 aa		5.01	□□□□□ -1.61
PTPN20-223	ENST00000509900	FAM19A1	Q7Z5A9	133 aa		5.01	□□□□□ -1.61
PTPN20-223	ENST00000509900	C9orf62	Q8N4C0	152 aa		5.01	□□□□□ -1.61
PTPN20-223	ENST00000509900	SPRR4	Q96PI1	79 aa		5.01	□□□□□ -1.61
PTPN20-223	ENST00000509900	ST20	Q9HBF5	79 aa		5.01	□□□□□ -1.61
PTPN20-223	ENST00000509900	IGKV2D-30	A0A075B6S6	120 aa		5	□□□□□ -1.61
PTPN20-223	ENST00000509900	PET100	P0DJ07	73 aa		5	□□□□□ -1.61
PTPN20-223	ENST00000509900	IGKV2-28	A0A075B6P5	120 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	RAB19	A4D1S5	217 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	MAP1LC3B2	A6NCE7	125 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	PAGE4	O60829	102 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	IFNA1	P01562	189 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	IGKV2D-28	P01615	120 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	NRAC	Q8N912	160 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	TIMM21	Q9BVV7	248 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	MAP1LC3B	Q9GZQ8	125 aa		4.99	□□□□□ -1.61
PTPN20-223	ENST00000509900	IGLV5-37	A0A075B6J1	123 aa		4.98	□□□□□ -1.61
PTPN20-223	ENST00000509900	SCO1	O75880	301 aa		4.98	□□□□□ -1.61
PTPN20-223	ENST00000509900	SMAGP	Q0VAQ4	97 aa		4.98	□□□□□ -1.61
PTPN20-223	ENST00000509900		Q6Q795	121 aa		4.98	□□□□□ -1.61
PTPN20-223	ENST00000509900	CBLN2	Q8IUK8	224 aa		4.98	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms