RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 SPANXA1Q9NS26 97 aa5.65□□□□□ -1.5
PDLIM5-213ENST00000509357 VPS13BQ7Z7G8 4022 aa5.64□□□□□ -1.51
PDLIM5-213ENST00000509357 TRAV13-1A0A0B4J241 112 aa5.64□□□□□ -1.51
PDLIM5-213ENST00000509357 SMAGPQ0VAQ4 97 aa5.64□□□□□ -1.51
PDLIM5-213ENST00000509357 ORMDL2Q53FV1 153 aa5.64□□□□□ -1.51
PDLIM5-213ENST00000509357 PDZD11Q5EBL8 140 aa5.64□□□□□ -1.51
PDLIM5-213ENST00000509357 C9orf163Q8N9P6 203 aa5.64□□□□□ -1.51
PDLIM5-213ENST00000509357 LINC00526Q96FQ7 95 aa5.64□□□□□ -1.51
PDLIM5-213ENST00000509357 CYSLTR1Q9Y271 337 aa5.64□□□□□ -1.51
PDLIM5-213ENST00000509357 SRRM2Q9UQ35 2752 aaKnown RBP5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 IGHV3-64A0A075B6Q5 118 aa5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 K7EMI3 77 aa5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 LINC00614P0C842 121 aa5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 UBE2D1P51668 147 aa5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 SS18Q15532 418 aa5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 HIGD2BQ4VC39 106 aa5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 LINC00242Q5T6M2 205 aa5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 HERC1Q15751 4861 aa5.63□□□□□ -1.51
PDLIM5-213ENST00000509357 PKHD1L1Q86WI1 4243 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 IGHV3OR16-9A0A0B4J2B5 98 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BKO60814 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BJP06899 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BOP23527 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BBP33778 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BDP58876 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 CNBPP62633 177 aaKnown RBP5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BCP62807 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST2H2BEQ16778 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 FA2HQ7L5A8 372 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 FAM19A2Q8N3H0 131 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BHQ93079 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 TMEM18Q96B42 140 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 TMEM141Q96I45 108 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 TIMM17AQ99595 171 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BNQ99877 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 HIST1H2BMQ99879 126 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
PDLIM5-213ENST00000509357 IFITM10A6NMD0 228 aa5.61□□□□□ -1.51
PDLIM5-213ENST00000509357 PANO1I0J062 215 aa5.61□□□□□ -1.51
PDLIM5-213ENST00000509357 J3QL48 77 aa5.61□□□□□ -1.51
PDLIM5-213ENST00000509357 SERF1AO75920 110 aa5.61□□□□□ -1.51
PDLIM5-213ENST00000509357 CD164L2Q6UWJ8 174 aa5.61□□□□□ -1.51
PDLIM5-213ENST00000509357 SDIM1Q6ZPB5 146 aa5.61□□□□□ -1.51
PDLIM5-213ENST00000509357 FAM19A3Q7Z5A8 133 aa5.61□□□□□ -1.51
PDLIM5-213ENST00000509357 C5orf38Q86SI9 138 aa5.61□□□□□ -1.51
PDLIM5-213ENST00000509357 MALP21145 153 aa5.6□□□□□ -1.51
PDLIM5-213ENST00000509357 S100A1P23297 94 aa5.6□□□□□ -1.51
PDLIM5-213ENST00000509357 ERASQ7Z444 233 aa5.6□□□□□ -1.51
PDLIM5-213ENST00000509357 SCGB3A1Q96QR1 104 aa5.6□□□□□ -1.51
PDLIM5-213ENST00000509357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-213ENST00000509357 FLG2Q5D862 2391 aaPredicted RBP5.6□□□□□ -1.51
PDLIM5-213ENST00000509357 IGLV4-69A0A075B6H9 119 aa5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 GVQW2A0A096LPI5 108 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 IGHV1-58A0A0C4DH39 117 aa5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 A0A0J9YXV3 536 aa5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 C1orf196B1AJZ1 125 aa5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 ZNF561-AS1K7EIQ3 104 aa5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 HBDP02042 147 aa5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 RPL37AP61513 92 aaKnown RBP5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 TEX43Q6ZNM6 134 aa5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 CST9LQ9H4G1 147 aa5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 DMBT1Q9UGM3 2413 aaPredicted RBP5.59□□□□□ -1.51
PDLIM5-213ENST00000509357 COX7A2LO14548 114 aa5.58□□□□□ -1.52
PDLIM5-213ENST00000509357 NPSP0C0P6 89 aa5.58□□□□□ -1.52
PDLIM5-213ENST00000509357 KIAA0087Q14695 138 aa5.58□□□□□ -1.52
PDLIM5-213ENST00000509357 CHCHD1Q96BP2 118 aaKnown RBP5.58□□□□□ -1.52
PDLIM5-213ENST00000509357 IGLV5-45A0A087WSX0 123 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 A0A087WZ39 114 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 IGKV2-24A0A0C4DH68 120 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 CHTF8P0CG12 524 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 MAJINQ3KP22 176 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 C10orf25Q5T742 122 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 BAGE3Q86Y29 109 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 VCX2Q9H322 139 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 CDKN2A-AS1Q9UH64 79 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 PKIGQ9Y2B9 76 aa5.57□□□□□ -1.52
PDLIM5-213ENST00000509357 A0A087WYN8 130 aa5.56□□□□□ -1.52
PDLIM5-213ENST00000509357 RAB5BP61020 215 aa5.56□□□□□ -1.52
PDLIM5-213ENST00000509357 CARD19Q96LW7 228 aa5.56□□□□□ -1.52
PDLIM5-213ENST00000509357 C11orf86A6NJI1 115 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 SMIM1B2RUZ4 78 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 APOMO95445 188 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 IGLC3P0DOY3 106 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 ZNF22P17026 224 aaPredicted RBP5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 SYCNQ0VAF6 134 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 PMVKQ15126 192 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 COA6Q5JTJ3 125 aaKnown RBP5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 Q6ZRU5 148 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 SPACA4Q8TDM5 124 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 C7orf33Q8WU49 177 aa5.55□□□□□ -1.52
PDLIM5-213ENST00000509357 TINCRA0A1B0GVN0 87 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 HSBP1O75506 76 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 CIRBPQ14011 172 aaKnown RBP5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 C2orf82Q6UX34 121 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 Q6ZN92 141 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 STPG4Q8N801 248 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 ORAOV1Q8WV07 137 aa5.54□□□□□ -1.52
PDLIM5-213ENST00000509357 IFI27L1Q96BM0 104 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms