RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 PMCHL1Q16048 86 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 EDC4Q6P2E9 1401 aaKnown RBP0.69□□□□□ -2.3
XRCC4-204ENST00000509268 Q6ZSA8 131 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 CNTRLQ7Z7A1 2325 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 UACAQ9BZF9 1416 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 DIP2CQ9Y2E4 1556 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 VWFP04275 2813 aa0.69□□□□□ -2.3
XRCC4-204ENST00000509268 EPRSP07814 1512 aaKnown RBP0.68□□□□□ -2.3
XRCC4-204ENST00000509268 KDM5DQ9BY66 1539 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 PCLOQ9Y6V0 5065 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 SSC5DA1L4H1 1573 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 MYO18BQ8IUG5 2567 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 WFDC2Q14508 124 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 SPINK13Q1W4C9 94 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 ETDBQ3ZM63 59 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 CFAP126Q5VTH2 177 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 MYO7BQ6PIF6 2116 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 ALKAL2Q6UX46 152 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 Q6ZRX8 168 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 SPRR4Q96PI1 79 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 PSENENQ9NZ42 101 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 ATP10BO94823 1461 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 POLA1P09884 1462 aaPredicted RBP0.68□□□□□ -2.3
XRCC4-204ENST00000509268 IFT172Q9UG01 1749 aa0.68□□□□□ -2.3
XRCC4-204ENST00000509268 UNC13BO14795 1591 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 RGPD4Q7Z3J3 1758 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 MAP2P11137 1827 aaKnown RBP0.67□□□□□ -2.3
XRCC4-204ENST00000509268 C7orf77A4D0Y5 90 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 ZNF815PA8K554 130 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 G3V318 75 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 K7EIL1 84 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 NMSQ5H8A3 153 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 PSMG4Q5JS54 123 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 SMIM11BQ8TCY0 68 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 S100A13Q99584 98 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 PRR15LQ9BU68 103 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 SPCS1Q9Y6A9 102 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 FANCAO15360 1455 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 ERVK-7P63135 1459 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 MAGI2Q86UL8 1455 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 SCN7AQ01118 1682 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 EPG5Q9HCE0 2579 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 KIF21AQ7Z4S6 1674 aa0.67□□□□□ -2.3
XRCC4-204ENST00000509268 NLRP1Q9C000 1473 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 A0A1B0GWA3 101 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 F8WEM9 126 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 BCE1O60756 84 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 KRTAP10-4P60372 401 aaPredicted RBP0.66□□□□□ -2.3
XRCC4-204ENST00000509268 FDCSPQ8NFU4 85 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 RABAC1Q9UI14 185 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 DCAF1Q9Y4B6 1507 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 DOPEY1Q5JWR5 2465 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 NAV2Q8IVL1 2488 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 CCDC168Q8NDH2 2452 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 ROS1P08922 2347 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 CLTCQ00610 1675 aaKnown RBP0.66□□□□□ -2.3
XRCC4-204ENST00000509268 RGPD3A6NKT7 1758 aaPredicted RBP0.66□□□□□ -2.3
XRCC4-204ENST00000509268 PPLO60437 1756 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 NEXMIFQ5QGS0 1516 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 A0A087WVE0 104 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 F2Z2F3 143 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 ANGP03950 147 aaKnown RBP0.66□□□□□ -2.3
XRCC4-204ENST00000509268 MGPP08493 103 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 ARMS2P0C7Q2 107 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 SPINT3P49223 89 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 ZNF720Q7Z2F6 126 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 SMIM4Q8WVI0 70 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 LINC01600Q96MT4 127 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 ST20Q9HBF5 79 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 CHD6Q8TD26 2715 aa0.66□□□□□ -2.3
XRCC4-204ENST00000509268 MUC2Q02817 5179 aa0.65□□□□□ -2.3
XRCC4-204ENST00000509268 ASXL3Q9C0F0 2248 aa0.65□□□□□ -2.3
XRCC4-204ENST00000509268 PIEZO1Q92508 2521 aa0.65□□□□□ -2.3
XRCC4-204ENST00000509268 UBR1Q8IWV7 1749 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 ANKHD1Q8IWZ3 2542 aaKnown RBP0.65□□□□□ -2.31
XRCC4-204ENST00000509268 PDCD11Q14690 1871 aaKnown RBP0.65□□□□□ -2.31
XRCC4-204ENST00000509268 DNAJC13O75165 2243 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 CADP27708 2225 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 DIP2BQ9P265 1576 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 HECTD1Q9ULT8 2610 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 ZFHX3Q15911 3703 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 KIF14Q15058 1648 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 GCHFRP30047 84 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 COX17Q14061 63 aa0.65□□□□□ -2.31
XRCC4-204ENST00000509268 BTAF1O14981 1849 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 MAP3K1Q13233 1512 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 KIAA1109Q2LD37 5005 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 ASH1LQ9NR48 2969 aaKnown RBP0.64□□□□□ -2.31
XRCC4-204ENST00000509268 MYO3AQ8NEV4 1616 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 SPTBN4Q9H254 2564 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 IQCF6A8MYZ5 107 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 HMGN2P05204 90 aaKnown RBP0.64□□□□□ -2.31
XRCC4-204ENST00000509268 SNRPFP62306 86 aaKnown RBP0.64□□□□□ -2.31
XRCC4-204ENST00000509268 ADIRFQ15847 76 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 KRTAP21-3Q3LHN1 58 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 LINC00846Q9NV44 126 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 PLAC8Q9NZF1 115 aa0.64□□□□□ -2.31
XRCC4-204ENST00000509268 FLNBO75369 2602 aaKnown RBP0.64□□□□□ -2.31
XRCC4-204ENST00000509268 SRCAPQ6ZRS2 3230 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms