RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 C1orf196B1AJZ1 125 aa7.94□□□□□ -1.14
PTPN20-218ENST00000508357 K7EMI3 77 aa7.94□□□□□ -1.14
PTPN20-218ENST00000508357 LINC00526Q96FQ7 95 aa7.94□□□□□ -1.14
PTPN20-218ENST00000508357 IGHV1-58A0A0C4DH39 117 aa7.93□□□□□ -1.14
PTPN20-218ENST00000508357 SDIM1Q6ZPB5 146 aa7.93□□□□□ -1.14
PTPN20-218ENST00000508357 C5orf38Q86SI9 138 aa7.93□□□□□ -1.14
PTPN20-218ENST00000508357 TOMM6Q96B49 74 aa7.93□□□□□ -1.14
PTPN20-218ENST00000508357 TMEM141Q96I45 108 aa7.93□□□□□ -1.14
PTPN20-218ENST00000508357 TRAPPC1Q9Y5R8 145 aa7.93□□□□□ -1.14
PTPN20-218ENST00000508357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.93□□□□□ -1.14
PTPN20-218ENST00000508357 IGHV3OR16-9A0A0B4J2B5 98 aa7.92□□□□□ -1.14
PTPN20-218ENST00000508357 COX7A2LO14548 114 aa7.92□□□□□ -1.14
PTPN20-218ENST00000508357 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
PTPN20-218ENST00000508357 CFAP161Q6P656 301 aa7.92□□□□□ -1.14
PTPN20-218ENST00000508357 C18orf32Q8TCD1 76 aa7.92□□□□□ -1.14
PTPN20-218ENST00000508357 AMELXQ99217 191 aa7.92□□□□□ -1.14
PTPN20-218ENST00000508357 A0A096LNJ9 63 aa7.91□□□□□ -1.14
PTPN20-218ENST00000508357 UBE2D1P51668 147 aa7.91□□□□□ -1.14
PTPN20-218ENST00000508357 COX6A2Q02221 97 aa7.91□□□□□ -1.14
PTPN20-218ENST00000508357 LINC00242Q5T6M2 205 aa7.91□□□□□ -1.14
PTPN20-218ENST00000508357 PRSS3P2Q8NHM4 247 aa7.91□□□□□ -1.14
PTPN20-218ENST00000508357 CHAC1Q9BUX1 264 aa7.91□□□□□ -1.14
PTPN20-218ENST00000508357 AP5S1Q9NUS5 200 aa7.91□□□□□ -1.14
PTPN20-218ENST00000508357 MYCBP2O75592 4640 aa7.9□□□□□ -1.14
PTPN20-218ENST00000508357 CHTF8P0CG12 524 aa7.9□□□□□ -1.14
PTPN20-218ENST00000508357 CIRBPQ14011 172 aaKnown RBP7.9□□□□□ -1.14
PTPN20-218ENST00000508357 Q5VSD8 79 aa7.9□□□□□ -1.14
PTPN20-218ENST00000508357 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
PTPN20-218ENST00000508357 TIMM17AQ99595 171 aa7.9□□□□□ -1.14
PTPN20-218ENST00000508357 SMCO4Q9NRQ5 59 aa7.9□□□□□ -1.14
PTPN20-218ENST00000508357 IGHV3-64A0A075B6Q5 118 aa7.89□□□□□ -1.15
PTPN20-218ENST00000508357 NPSP0C0P6 89 aa7.89□□□□□ -1.15
PTPN20-218ENST00000508357 TEX43Q6ZNM6 134 aa7.89□□□□□ -1.15
PTPN20-218ENST00000508357 FA2HQ7L5A8 372 aa7.89□□□□□ -1.15
PTPN20-218ENST00000508357 IGLV4-69A0A075B6H9 119 aa7.88□□□□□ -1.15
PTPN20-218ENST00000508357 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.88□□□□□ -1.15
PTPN20-218ENST00000508357 MALP21145 153 aa7.88□□□□□ -1.15
PTPN20-218ENST00000508357 SPAG11BQ08648 103 aa7.88□□□□□ -1.15
PTPN20-218ENST00000508357 FAM19A3Q7Z5A8 133 aa7.88□□□□□ -1.15
PTPN20-218ENST00000508357 CARD19Q96LW7 228 aa7.88□□□□□ -1.15
PTPN20-218ENST00000508357 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
PTPN20-218ENST00000508357 A0A087WZ39 114 aa7.87□□□□□ -1.15
PTPN20-218ENST00000508357 EPM2AB3EWF7 344 aa7.87□□□□□ -1.15
PTPN20-218ENST00000508357 PMCHL1Q16048 86 aa7.87□□□□□ -1.15
PTPN20-218ENST00000508357 Q6ZN92 141 aa7.87□□□□□ -1.15
PTPN20-218ENST00000508357 Q6ZRU5 148 aa7.87□□□□□ -1.15
PTPN20-218ENST00000508357 ERASQ7Z444 233 aa7.87□□□□□ -1.15
PTPN20-218ENST00000508357 SPACA4Q8TDM5 124 aa7.87□□□□□ -1.15
PTPN20-218ENST00000508357 A0A096LNI7 61 aa7.86□□□□□ -1.15
PTPN20-218ENST00000508357 KRTAP10-4P60372 401 aaPredicted RBP7.86□□□□□ -1.15
PTPN20-218ENST00000508357 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
PTPN20-218ENST00000508357 ORAOV1Q8WV07 137 aa7.86□□□□□ -1.15
PTPN20-218ENST00000508357 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
PTPN20-218ENST00000508357 C2orf88Q9BSF0 95 aa7.86□□□□□ -1.15
PTPN20-218ENST00000508357 VCX2Q9H322 139 aa7.86□□□□□ -1.15
PTPN20-218ENST00000508357 ZNF561-AS1K7EIQ3 104 aa7.85□□□□□ -1.15
PTPN20-218ENST00000508357 SCO1O75880 301 aa7.85□□□□□ -1.15
PTPN20-218ENST00000508357 KIAA0087Q14695 138 aa7.85□□□□□ -1.15
PTPN20-218ENST00000508357 OR10D4PQ8NGN7 298 aa7.85□□□□□ -1.15
PTPN20-218ENST00000508357 FAT3Q8TDW7 4589 aa7.84□□□□□ -1.15
PTPN20-218ENST00000508357 A0A0J9YXV3 536 aa7.84□□□□□ -1.15
PTPN20-218ENST00000508357 COLCA2A8K830 154 aa7.84□□□□□ -1.15
PTPN20-218ENST00000508357 LINC00614P0C842 121 aa7.84□□□□□ -1.15
PTPN20-218ENST00000508357 G0S2P27469 103 aa7.84□□□□□ -1.15
PTPN20-218ENST00000508357 PDZD11Q5EBL8 140 aa7.84□□□□□ -1.15
PTPN20-218ENST00000508357 C10orf25Q5T742 122 aa7.84□□□□□ -1.15
PTPN20-218ENST00000508357 C2orf48Q96LS8 159 aa7.84□□□□□ -1.15
PTPN20-218ENST00000508357 APOMO95445 188 aa7.83□□□□□ -1.16
PTPN20-218ENST00000508357 TRGC2P03986 189 aa7.83□□□□□ -1.16
PTPN20-218ENST00000508357 LINC00310P59036 64 aa7.83□□□□□ -1.16
PTPN20-218ENST00000508357 CAMK2N2Q96S95 79 aa7.83□□□□□ -1.16
PTPN20-218ENST00000508357 A0A087WYN8 130 aa7.82□□□□□ -1.16
PTPN20-218ENST00000508357 IGKV2-24A0A0C4DH68 120 aa7.82□□□□□ -1.16
PTPN20-218ENST00000508357 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
PTPN20-218ENST00000508357 HBDP02042 147 aa7.82□□□□□ -1.16
PTPN20-218ENST00000508357 PAPPA-AS1Q5QFB9 102 aa7.82□□□□□ -1.16
PTPN20-218ENST00000508357 LINC01561Q8N1V8 128 aa7.82□□□□□ -1.16
PTPN20-218ENST00000508357 CST9LQ9H4G1 147 aa7.82□□□□□ -1.16
PTPN20-218ENST00000508357 CDKN2A-AS1Q9UH64 79 aa7.82□□□□□ -1.16
PTPN20-218ENST00000508357 IGLV5-45A0A087WSX0 123 aa7.81□□□□□ -1.16
PTPN20-218ENST00000508357 LINC01549A6NIU2 74 aa7.81□□□□□ -1.16
PTPN20-218ENST00000508357 UNQ6190/PRO20217Q6UXQ8 127 aa7.81□□□□□ -1.16
PTPN20-218ENST00000508357 PLAC8Q9NZF1 115 aa7.81□□□□□ -1.16
PTPN20-218ENST00000508357 C6orf48Q9UBA6 75 aa7.81□□□□□ -1.16
PTPN20-218ENST00000508357 LRP1Q07954 4544 aaKnown RBP7.8□□□□□ -1.16
PTPN20-218ENST00000508357 FLG2Q5D862 2391 aaPredicted RBP7.8□□□□□ -1.16
PTPN20-218ENST00000508357 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
PTPN20-218ENST00000508357 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
PTPN20-218ENST00000508357 HERVK_113P63121 156 aa7.8□□□□□ -1.16
PTPN20-218ENST00000508357 PMVKQ15126 192 aa7.8□□□□□ -1.16
PTPN20-218ENST00000508357 MRPL35Q9NZE8 188 aaKnown RBP7.8□□□□□ -1.16
PTPN20-218ENST00000508357 SMIM1B2RUZ4 78 aa7.79□□□□□ -1.16
PTPN20-218ENST00000508357 PTTG1IPP53801 180 aa7.79□□□□□ -1.16
PTPN20-218ENST00000508357 RAB5BP61020 215 aa7.79□□□□□ -1.16
PTPN20-218ENST00000508357 MAJINQ3KP22 176 aa7.79□□□□□ -1.16
PTPN20-218ENST00000508357 C2orf82Q6UX34 121 aa7.79□□□□□ -1.16
PTPN20-218ENST00000508357 CHCHD1Q96BP2 118 aaKnown RBP7.79□□□□□ -1.16
PTPN20-218ENST00000508357 LOC107984640A0A0U1RRK4 108 aa7.78□□□□□ -1.16
PTPN20-218ENST00000508357 NDUFA1O15239 70 aa7.78□□□□□ -1.16
PTPN20-218ENST00000508357 RNF151Q2KHN1 245 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms