RNA–Protein interactions for RNA: ENST00000508169.1

COL6A4P1-204, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 3

Gene COL6A4P1, Length 527 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-204ENST00000508169 AP1S3Q96PC3 154 aa3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 ODF3Q96PU9 254 aa3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 NAA38Q9BRA0 125 aaKnown RBP3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 PRADC1Q9BSG0 188 aa3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 RHPN1-AS1Q9BWJ2 59 aa3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 CNFNQ9BYD5 112 aa3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 RNASE7Q9H1E1 156 aaKnown RBP3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 LINC00527Q9UJ94 153 aa3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 ZNF469Q96JG9 3925 aaPredicted RBP3.6□□□□□ -1.83
COL6A4P1-204ENST00000508169 FLNBO75369 2602 aaKnown RBP3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 A0A1B0GXF2 115 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 M0R3E3 92 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 TRGC1P0CF51 173 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 CRIP1P50238 77 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 Q0VG73 95 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 TDRG1Q3Y452 100 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 MEIG1Q5JSS6 88 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 LINC00322Q6ZN03 302 aaPredicted RBP3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 NUP35Q8NFH5 326 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 DCANP1Q8TF63 244 aa3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 NSD1Q96L73 2696 aaPredicted RBP3.59□□□□□ -1.83
COL6A4P1-204ENST00000508169 CSMD1Q96PZ7 3565 aa3.59□□□□□ -1.84
COL6A4P1-204ENST00000508169 OTOGQ6ZRI0 2925 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 TRAV8-1A0A0A6YYK1 113 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 FAM236DA0A1B0GTK5 79 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 A8MTW9 85 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 HIGD1CA8MV81 97 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 F2Z2F3 143 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 K7EP34 96 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 NDUFC2O95298 119 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 FAM236CP0DP71 79 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 MGST1P10620 155 aaKnown RBP3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 CBLN1P23435 193 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 HINT1P49773 126 aaPredicted RBP3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 TMEM136Q6ZRR5 245 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 PRNTQ86SH4 94 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 LINC00337Q8N6G1 96 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 ZC2HC1AQ96GY0 325 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 TMEM70Q9BUB7 260 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 AGPAT4-IT1Q9H0P7 198 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 TRAPPC1Q9Y5R8 145 aa3.58□□□□□ -1.84
COL6A4P1-204ENST00000508169 HIVEP1P15822 2718 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 C2orf70A6NJV1 201 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 CCDC179H3BU77 68 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 TAX1BP3O14907 124 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 GPX1P07203 203 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 IGLC6P0CF74 106 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 FAM104BQ5XKR9 115 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 MRPL54Q6P161 138 aaKnown RBP3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 HRCT1Q6UXD1 115 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 DAZ4Q86SG3 579 aaKnown RBP3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 DEFB125Q8N687 156 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 OR8A1Q8NGG7 326 aa3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 SETD2Q9BYW2 2564 aaPredicted RBP3.57□□□□□ -1.84
COL6A4P1-204ENST00000508169 A0A1B0GUT8 65 aa3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 SNRPD3P62318 126 aaKnown RBP3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 HBBP68871 147 aa3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 LYRM7Q5U5X0 104 aa3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 C10orf99Q6UWK7 81 aa3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 ZFAND2AQ8N6M9 145 aa3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 PLEKHB2Q96CS7 222 aa3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 C2CD3Q4AC94 2353 aa3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 SORL1Q92673 2214 aa3.56□□□□□ -1.84
COL6A4P1-204ENST00000508169 ZFHX3Q15911 3703 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 SETXQ7Z333 2677 aaKnown RBP3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 IGKV2-40A0A087WW87 121 aaPredicted RBP3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 TRAV21A0A0B4J279 112 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 A0A0J9YX75 114 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 LOC107984640A0A0U1RRK4 108 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 SH2D1AO60880 128 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 DPM2O94777 84 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 IGKV2D-40P01614 121 aaPredicted RBP3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 IGLV7-43P04211 117 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 IGLC3P0DOY3 106 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 IFITM1P13164 125 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 TSPOP30536 169 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 ZNF80P51504 273 aaPredicted RBP3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 C1orf158Q8N1D5 194 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 SPANXDQ9BXN6 97 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 AKAP9Q99996 3911 aa3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 ANK3Q12955 4377 aaKnown RBP3.55□□□□□ -1.84
COL6A4P1-204ENST00000508169 FN1P02751 2386 aaKnown RBP3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 HLA-DMBP28068 263 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 PMAIP1Q13794 54 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 DEFB114Q30KQ6 69 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 SPATA45Q537H7 98 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 GDF5OSQ5U4N7 250 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 Q6ZUT4 128 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 NDUFA11Q86Y39 141 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 LINC00467Q9BRT7 94 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 TMEM191AQ9H0A3 160 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 U3KQK5 164 aa3.54□□□□□ -1.84
COL6A4P1-204ENST00000508169 LINC01546A6NGU7 62 aa3.53□□□□□ -1.84
COL6A4P1-204ENST00000508169 EBLN2Q6P2I7 272 aa3.53□□□□□ -1.84
COL6A4P1-204ENST00000508169 Q6Q795 121 aa3.53□□□□□ -1.84
COL6A4P1-204ENST00000508169 LYZL1Q6UWQ5 148 aa3.53□□□□□ -1.84
COL6A4P1-204ENST00000508169 AMTNQ6UX39 209 aa3.53□□□□□ -1.84
COL6A4P1-204ENST00000508169 CHCHD1Q96BP2 118 aaKnown RBP3.53□□□□□ -1.84
COL6A4P1-204ENST00000508169 F8P00451 2351 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms