RNA–Protein interactions for RNA: ENST00000507215.5

NR1I3-224, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 620 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-224ENST00000507215 APCSP02743 223 aa4.02□□□□□ -1.77
NR1I3-224ENST00000507215 ESDP10768 282 aa4.02□□□□□ -1.77
NR1I3-224ENST00000507215 XCL1P47992 114 aa4.02□□□□□ -1.77
NR1I3-224ENST00000507215 SSTP61278 116 aa4.02□□□□□ -1.77
NR1I3-224ENST00000507215 C9orf116Q5BN46 136 aaPredicted RBP4.02□□□□□ -1.77
NR1I3-224ENST00000507215 RNASEKQ6P5S7 137 aaKnown RBP4.02□□□□□ -1.77
NR1I3-224ENST00000507215 ERASQ7Z444 233 aa4.02□□□□□ -1.77
NR1I3-224ENST00000507215 BAGE2Q86Y30 109 aa4.02□□□□□ -1.77
NR1I3-224ENST00000507215 MAP1LC3BQ9GZQ8 125 aa4.02□□□□□ -1.77
NR1I3-224ENST00000507215 ATP6V1G1O75348 118 aa4.01□□□□□ -1.77
NR1I3-224ENST00000507215 NTF3P20783 257 aa4.01□□□□□ -1.77
NR1I3-224ENST00000507215 LCE3CQ5T5A8 94 aa4.01□□□□□ -1.77
NR1I3-224ENST00000507215 OR2D3Q8NGH3 330 aa4.01□□□□□ -1.77
NR1I3-224ENST00000507215 SMIM12Q96EX1 92 aa4.01□□□□□ -1.77
NR1I3-224ENST00000507215 IMMP2LQ96T52 175 aa4.01□□□□□ -1.77
NR1I3-224ENST00000507215 BIN3Q9NQY0 253 aa4.01□□□□□ -1.77
NR1I3-224ENST00000507215 A0A087WZ39 114 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 LINC00959A0A1B0GUT2 108 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 A0A1W2PNN7 141 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 C19orf71A6NCJ1 209 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 C1orf196B1AJZ1 125 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 IGLC6P0CF74 106 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 DEFA1P59665 94 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 DEFA3P59666 94 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 ZNF726P1Q15940 193 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 KRTAP5-6Q6L8G9 129 aaPredicted RBP4□□□□□ -1.77
NR1I3-224ENST00000507215 SMIM15Q7Z3B0 74 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 NUP35Q8NFH5 326 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 CAMK2N2Q96S95 79 aa4□□□□□ -1.77
NR1I3-224ENST00000507215 MUC21A0A140T8X8 626 aa3.99□□□□□ -1.77
NR1I3-224ENST00000507215 COX7A2LO14548 114 aa3.99□□□□□ -1.77
NR1I3-224ENST00000507215 UPK1BO75841 260 aa3.99□□□□□ -1.77
NR1I3-224ENST00000507215 KRTAP1-4P0C5Y4 121 aa3.99□□□□□ -1.77
NR1I3-224ENST00000507215 RPL18AQ02543 176 aaKnown RBP3.99□□□□□ -1.77
NR1I3-224ENST00000507215 Q8NBF4 154 aa3.99□□□□□ -1.77
NR1I3-224ENST00000507215 MRAP2Q96G30 205 aa3.99□□□□□ -1.77
NR1I3-224ENST00000507215 CNFNQ9BYD5 112 aa3.99□□□□□ -1.77
NR1I3-224ENST00000507215 GEMIN7Q9H840 131 aaKnown RBP3.99□□□□□ -1.77
NR1I3-224ENST00000507215 FSIP2Q5CZC0 6907 aa3.99□□□□□ -1.77
NR1I3-224ENST00000507215 UMAD1C9J7I0 102 aa3.98□□□□□ -1.77
NR1I3-224ENST00000507215 G3V3Q6 166 aa3.98□□□□□ -1.77
NR1I3-224ENST00000507215 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.98□□□□□ -1.77
NR1I3-224ENST00000507215 I3L3M4 83 aa3.98□□□□□ -1.77
NR1I3-224ENST00000507215 MEF2BQ02080 365 aaPredicted RBP3.98□□□□□ -1.77
NR1I3-224ENST00000507215 TMEM241Q24JQ0 296 aa3.98□□□□□ -1.77
NR1I3-224ENST00000507215 RPL7L1Q6DKI1 246 aaKnown RBP3.98□□□□□ -1.77
NR1I3-224ENST00000507215 TMUB2Q71RG4 321 aa3.98□□□□□ -1.77
NR1I3-224ENST00000507215 MRPL52Q86TS9 123 aaKnown RBP3.98□□□□□ -1.77
NR1I3-224ENST00000507215 C9orf62Q8N4C0 152 aa3.98□□□□□ -1.77
NR1I3-224ENST00000507215 MRPL35Q9NZE8 188 aaKnown RBP3.98□□□□□ -1.77
NR1I3-224ENST00000507215 CSDC2Q9Y534 153 aaKnown RBP3.98□□□□□ -1.77
NR1I3-224ENST00000507215 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.97□□□□□ -1.77
NR1I3-224ENST00000507215 IGKV2-29A2NJV5 120 aaPredicted RBP3.97□□□□□ -1.77
NR1I3-224ENST00000507215 PCP4L1A6NKN8 68 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 BCL2L11O43521 198 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 IFNA1P01562 189 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 BCL2P10415 239 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 CTRLP40313 264 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 RPL35P42766 123 aaKnown RBP3.97□□□□□ -1.77
NR1I3-224ENST00000507215 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 PHF5AQ7RTV0 110 aaKnown RBP3.97□□□□□ -1.77
NR1I3-224ENST00000507215 OR10D4PQ8NGN7 298 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 LINC00526Q96FQ7 95 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 CDC42SE2Q9NRR3 84 aa3.97□□□□□ -1.77
NR1I3-224ENST00000507215 TRBV6-5A0A0K0K1A5 114 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 A0A1B0GVG6 124 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 SDHAF1A6NFY7 115 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 NUPR1O60356 82 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 PMCHP20382 165 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 DSCR10P59022 87 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 UBE2BP63146 152 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 GATD1Q8NB37 220 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 MANBALQ9NQG1 85 aa3.96□□□□□ -1.78
NR1I3-224ENST00000507215 C7orf77A4D0Y5 90 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 NDUFA1O15239 70 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 ZNF861PO60384 105 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 GIPP09681 153 aaPredicted RBP3.95□□□□□ -1.78
NR1I3-224ENST00000507215 CRYGAP11844 174 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 GNG4P50150 75 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 SEC61GP60059 68 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 SPAG11BQ08648 103 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 LYZL1Q6UWQ5 148 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 KCNRGQ8N5I3 272 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 SFT2D1Q8WV19 159 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 MBD3L1Q8WWY6 194 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 C11orf52Q96A22 123 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 RPP21Q9H633 154 aaKnown RBP3.95□□□□□ -1.78
NR1I3-224ENST00000507215 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
NR1I3-224ENST00000507215 RAB19A4D1S5 217 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 TEX46H3BTG2 121 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 PPP1R17O96001 155 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 CCL20P78556 96 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 RGS21Q2M5E4 152 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 CENPWQ5EE01 88 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 ST20Q9HBF5 79 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 CYTL1Q9NRR1 136 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 ALG5Q9Y673 324 aa3.94□□□□□ -1.78
NR1I3-224ENST00000507215 FXYD6-FXYD2A0A087WZ82 144 aa3.93□□□□□ -1.78
NR1I3-224ENST00000507215 TRBV27A0A0K0K1C4 114 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms