RNA–Protein interactions for RNA: ENST00000507017.5

SFXN1-206, Transcript of sideroflexin 1, humanhuman

TSL 5

Gene SFXN1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-206ENST00000507017 MAJINQ3KP22 176 aa4.91□□□□□ -1.62
SFXN1-206ENST00000507017 TEX43Q6ZNM6 134 aa4.91□□□□□ -1.62
SFXN1-206ENST00000507017 Q6ZUT4 128 aa4.91□□□□□ -1.62
SFXN1-206ENST00000507017 Q8N8P6 123 aa4.91□□□□□ -1.62
SFXN1-206ENST00000507017 TMEM141Q96I45 108 aa4.91□□□□□ -1.62
SFXN1-206ENST00000507017 SEC11CQ9BY50 192 aa4.91□□□□□ -1.62
SFXN1-206ENST00000507017 PLAC8Q9NZF1 115 aa4.91□□□□□ -1.62
SFXN1-206ENST00000507017 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.91□□□□□ -1.62
SFXN1-206ENST00000507017 A0A087WYN8 130 aa4.9□□□□□ -1.63
SFXN1-206ENST00000507017 TMEM218A2RU14 115 aa4.9□□□□□ -1.63
SFXN1-206ENST00000507017 KRTAP29-1A8MX34 341 aaPredicted RBP4.9□□□□□ -1.63
SFXN1-206ENST00000507017 NDUFA1O15239 70 aa4.9□□□□□ -1.63
SFXN1-206ENST00000507017 SPAG11BQ08648 103 aa4.9□□□□□ -1.63
SFXN1-206ENST00000507017 NDUFA5Q16718 116 aa4.9□□□□□ -1.63
SFXN1-206ENST00000507017 RNF151Q2KHN1 245 aa4.9□□□□□ -1.63
SFXN1-206ENST00000507017 APOBP04114 4563 aaKnown RBP4.9□□□□□ -1.63
SFXN1-206ENST00000507017 HSPG2P98160 4391 aa4.9□□□□□ -1.63
SFXN1-206ENST00000507017 IGKV2-24A0A0C4DH68 120 aa4.89□□□□□ -1.63
SFXN1-206ENST00000507017 RPL39P62891 51 aaKnown RBP4.89□□□□□ -1.63
SFXN1-206ENST00000507017 RHEBQ15382 184 aa4.89□□□□□ -1.63
SFXN1-206ENST00000507017 C2orf66Q6UXQ4 117 aa4.89□□□□□ -1.63
SFXN1-206ENST00000507017 Q6ZRU5 148 aa4.89□□□□□ -1.63
SFXN1-206ENST00000507017 LINC01561Q8N1V8 128 aa4.89□□□□□ -1.63
SFXN1-206ENST00000507017 STPG4Q8N801 248 aa4.89□□□□□ -1.63
SFXN1-206ENST00000507017 ORAOV1Q8WV07 137 aa4.89□□□□□ -1.63
SFXN1-206ENST00000507017 LOC389332A0A1B0GUA5 103 aa4.88□□□□□ -1.63
SFXN1-206ENST00000507017 PRSS2P07478 247 aa4.88□□□□□ -1.63
SFXN1-206ENST00000507017 RNASE13Q5GAN3 156 aaKnown RBP4.88□□□□□ -1.63
SFXN1-206ENST00000507017 COMMD7Q86VX2 200 aa4.88□□□□□ -1.63
SFXN1-206ENST00000507017 GNB1LQ9BYB4 327 aa4.88□□□□□ -1.63
SFXN1-206ENST00000507017 VCX2Q9H322 139 aa4.88□□□□□ -1.63
SFXN1-206ENST00000507017 MRPL35Q9NZE8 188 aaKnown RBP4.88□□□□□ -1.63
SFXN1-206ENST00000507017 IGHV3OR16-9A0A0B4J2B5 98 aa4.87□□□□□ -1.63
SFXN1-206ENST00000507017 SLPIP03973 132 aa4.87□□□□□ -1.63
SFXN1-206ENST00000507017 PTTG1IPP53801 180 aa4.87□□□□□ -1.63
SFXN1-206ENST00000507017 C5orf38Q86SI9 138 aa4.87□□□□□ -1.63
SFXN1-206ENST00000507017 PRSS3P2Q8NHM4 247 aa4.87□□□□□ -1.63
SFXN1-206ENST00000507017 PACRGQ96M98 296 aaPredicted RBP4.87□□□□□ -1.63
SFXN1-206ENST00000507017 TIMM17AQ99595 171 aa4.87□□□□□ -1.63
SFXN1-206ENST00000507017 SMCO4Q9NRQ5 59 aa4.87□□□□□ -1.63
SFXN1-206ENST00000507017 SRRM2Q9UQ35 2752 aaKnown RBP4.86□□□□□ -1.63
SFXN1-206ENST00000507017 IGLV4-3A0A075B6K6 122 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 A0A087WZ39 114 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 A0A096LNI7 61 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 TRBV30A0A0K0K1B3 111 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 CHTF8P0CG12 524 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 HERVK_113P63121 156 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 RPL18AQ02543 176 aaKnown RBP4.86□□□□□ -1.63
SFXN1-206ENST00000507017 GAGE2BQ13066 116 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 SERTAD4-AS1Q5TG53 156 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 Q6ZRP5 223 aa4.86□□□□□ -1.63
SFXN1-206ENST00000507017 GEMIN7Q9H840 131 aaKnown RBP4.86□□□□□ -1.63
SFXN1-206ENST00000507017 FLG2Q5D862 2391 aaPredicted RBP4.86□□□□□ -1.63
SFXN1-206ENST00000507017 SNAPINO95295 136 aa4.85□□□□□ -1.63
SFXN1-206ENST00000507017 CXCL5P42830 114 aa4.85□□□□□ -1.63
SFXN1-206ENST00000507017 CKS1BP61024 79 aa4.85□□□□□ -1.63
SFXN1-206ENST00000507017 REG3GQ6UW15 175 aa4.85□□□□□ -1.63
SFXN1-206ENST00000507017 FA2HQ7L5A8 372 aa4.85□□□□□ -1.63
SFXN1-206ENST00000507017 CARHSP1Q9Y2V2 147 aaKnown RBP4.85□□□□□ -1.63
SFXN1-206ENST00000507017 PANO1I0J062 215 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 TLX1NBP0CAT3 122 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 ADCYAP1P18509 176 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 UBE2D1P51668 147 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 KRTAP10-4P60372 401 aaPredicted RBP4.84□□□□□ -1.63
SFXN1-206ENST00000507017 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 ERASQ7Z444 233 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 SVBPQ8N300 66 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 TOMM6Q96B49 74 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 SCGB3A1Q96QR1 104 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 AMELXQ99217 191 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 ALKBH7Q9BT30 221 aaPredicted RBP4.84□□□□□ -1.63
SFXN1-206ENST00000507017 RPS10P5Q9NQ39 176 aa4.84□□□□□ -1.63
SFXN1-206ENST00000507017 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.83□□□□□ -1.64
SFXN1-206ENST00000507017 RAB5BP61020 215 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 PRR3P79522 188 aaKnown RBP4.83□□□□□ -1.64
SFXN1-206ENST00000507017 IFITM2Q01629 132 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 FABP9Q0Z7S8 132 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 C10orf91Q5T1B1 145 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 FAM19A3Q7Z5A8 133 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 Q8IZM0 81 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 LINC00526Q96FQ7 95 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 KRTAP4-6Q9BYQ5 205 aa4.83□□□□□ -1.64
SFXN1-206ENST00000507017 IGIPA6NJ69 53 aa4.82□□□□□ -1.64
SFXN1-206ENST00000507017 NDUFC2-KCTD14E9PQ53 114 aa4.82□□□□□ -1.64
SFXN1-206ENST00000507017 H3BRM9 83 aa4.82□□□□□ -1.64
SFXN1-206ENST00000507017 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
SFXN1-206ENST00000507017 SPINK6Q6UWN8 80 aa4.82□□□□□ -1.64
SFXN1-206ENST00000507017 OPRPNQ99935 248 aaPredicted RBP4.82□□□□□ -1.64
SFXN1-206ENST00000507017 MRPL18Q9H0U6 180 aaKnown RBP4.82□□□□□ -1.64
SFXN1-206ENST00000507017 LINC01546A6NGU7 62 aa4.81□□□□□ -1.64
SFXN1-206ENST00000507017 ODF1Q14990 250 aa4.81□□□□□ -1.64
SFXN1-206ENST00000507017 KIAA1644Q3SXP7 199 aa4.81□□□□□ -1.64
SFXN1-206ENST00000507017 C9orf116Q5BN46 136 aaPredicted RBP4.81□□□□□ -1.64
SFXN1-206ENST00000507017 SFTA2Q6UW10 78 aa4.81□□□□□ -1.64
SFXN1-206ENST00000507017 LINC00469Q8N7U9 141 aa4.81□□□□□ -1.64
SFXN1-206ENST00000507017 TOMM7Q9P0U1 55 aa4.81□□□□□ -1.64
SFXN1-206ENST00000507017 TRAPPC1Q9Y5R8 145 aa4.81□□□□□ -1.64
SFXN1-206ENST00000507017 TINCRA0A1B0GVN0 87 aa4.8□□□□□ -1.64
SFXN1-206ENST00000507017 F8VRH5 84 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms