RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 ARRDC1-AS1Q9H2J1 176 aa2.38□□□□□ -2.03
SMAD1-205ENST00000506626 CDC42SE1Q9NRR8 79 aa2.38□□□□□ -2.03
SMAD1-205ENST00000506626 SVILO95425 2214 aa2.38□□□□□ -2.03
SMAD1-205ENST00000506626 SDK2Q58EX2 2172 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 MED13Q9UHV7 2174 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 DNAJC13O75165 2243 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 TRAV10A0A0B4J240 114 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 IGHV3OR16-9A0A0B4J2B5 98 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 A0A0J9YXV3 536 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 HCG22E2RYF7 251 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 C5orf67F2Z3F1 127 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 H0Y9J4 135 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 C19orf84I3L1E1 186 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 BPY2O14599 106 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 PSPHP1O15172 72 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 PSCAO43653 123 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 MGPP08493 103 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 LINC00313P59037 77 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 RPL39P62891 51 aaKnown RBP2.37□□□□□ -2.03
SMAD1-205ENST00000506626 Q5VV11 94 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 Q6ZS52 159 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 MIR7-3HGQ8N6C7 128 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 PATE1Q8WXA2 126 aa2.37□□□□□ -2.03
SMAD1-205ENST00000506626 F5P12259 2224 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 IGHV3-64A0A075B6Q5 118 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 LCE6AA0A183 80 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 CHKB-CPT1BH3BT56 60 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 K7EIM0 57 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 CCL24O00175 119 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 NCR3O14931 201 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 LY6HO94772 140 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 IGHV3-48P01763 117 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 PRM2P04554 102 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 LINC00315P59091 139 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 DEFB114Q30KQ6 69 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 C10orf55Q5SWW7 151 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 IGFL3Q6UXB1 125 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 KRTAP11-1Q8IUC1 163 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 C1orf64Q8NEQ6 169 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 WFDC9Q8NEX5 89 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 SPTSSBQ8NFR3 76 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 ITLN2Q8WWU7 325 aaPredicted RBP2.36□□□□□ -2.03
SMAD1-205ENST00000506626 RNF5Q99942 180 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 OCR1Q9BZK8 76 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 Q9HAA7 133 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 NAV3Q8IVL0 2385 aa2.36□□□□□ -2.03
SMAD1-205ENST00000506626 MUC4Q99102 2169 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 IGHV3-20A0A0C4DH32 117 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 LOC101927531A0A1B0GV80 90 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 IGKV2-29A2NJV5 120 aaPredicted RBP2.35□□□□□ -2.03
SMAD1-205ENST00000506626 C10orf142B7Z368 130 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 C3orf84H3BNL1 204 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 LECT2O14960 151 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 LY6G6DO95868 133 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 HAMPP81172 84 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
SMAD1-205ENST00000506626 C9orf129Q5T035 196 aaKnown RBP2.35□□□□□ -2.03
SMAD1-205ENST00000506626 C9orf66Q5T8R8 295 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 FAM74A4Q5TZK3 123 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 LEAP2Q969E1 77 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 CELA1Q9UNI1 258 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 KIAA0100Q14667 2235 aaKnown RBP2.35□□□□□ -2.03
SMAD1-205ENST00000506626 BRWD1Q9NSI6 2320 aa2.35□□□□□ -2.03
SMAD1-205ENST00000506626 IGHV1OR15-1A0A075B7D0 117 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 TRBV10-1A0A0K0K1A3 114 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 SPTY2D1-AS1A0A0U1RR47 76 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 A0A1B0GW54 56 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 A6NED7 52 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 IGHV4-31P0DP07 118 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 NDPQ00604 133 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 CCL14Q16627 93 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 Q6ZQT0 140 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 LINC00337Q8N6G1 96 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 C11orf72Q8NBR9 251 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 SMIM11BQ8TCY0 68 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 Q9BRP9 147 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.03
SMAD1-205ENST00000506626 ASCC3Q8N3C0 2202 aaKnown RBP2.33□□□□□ -2.04
SMAD1-205ENST00000506626 IGHV1-3A0A0C4DH29 117 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 M0QY20 66 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 CCL3P10147 92 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 PRR3P79522 188 aaKnown RBP2.33□□□□□ -2.04
SMAD1-205ENST00000506626 FBXL19-AS1Q494R0 122 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 CASC2Q6XLA1 102 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 NTM-AS1Q6ZSK4 140 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 SCXQ7RTU7 201 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 SPANXA2-OT1Q8N9U9 137 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 ZNRF1Q8ND25 227 aa2.33□□□□□ -2.04
SMAD1-205ENST00000506626 ZCCHC13Q8WW36 166 aaKnown RBP2.33□□□□□ -2.04
SMAD1-205ENST00000506626 PRRC2BQ5JSZ5 2229 aaKnown RBP2.33□□□□□ -2.04
SMAD1-205ENST00000506626 A0A0C4DFX4 3053 aa2.32□□□□□ -2.04
SMAD1-205ENST00000506626 IGLV11-55A0A075B6I3 123 aa2.32□□□□□ -2.04
SMAD1-205ENST00000506626 IGHV3-21A0A0B4J1V1 117 aa2.32□□□□□ -2.04
SMAD1-205ENST00000506626 TFF1P04155 84 aa2.32□□□□□ -2.04
SMAD1-205ENST00000506626 RNASE3P12724 160 aaKnown RBP2.32□□□□□ -2.04
SMAD1-205ENST00000506626 KLK9Q2XQG4 91 aa2.32□□□□□ -2.04
SMAD1-205ENST00000506626 C6orf99Q4VX62 202 aa2.32□□□□□ -2.04
SMAD1-205ENST00000506626 ZFAND2AQ8N6M9 145 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms