RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 TIMM17AQ99595 171 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 CELA1Q9UNI1 258 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 IGHV3-73A0A0B4J1V6 119 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 TSTD3H0UI37 97 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 ZNF22P17026 224 aaPredicted RBP4.01□□□□□ -1.77
SCLT1-207ENST00000506233 KRTAP26-1Q6PEX3 210 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 GTSCR1Q86UQ5 136 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 DNAJC30Q96LL9 226 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 HIGD1BQ9P298 99 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 TP53TG1Q9Y2A0 90 aa4.01□□□□□ -1.77
SCLT1-207ENST00000506233 M0R2P5 195 aa4□□□□□ -1.77
SCLT1-207ENST00000506233 SPANXN1Q5VSR9 72 aa4□□□□□ -1.77
SCLT1-207ENST00000506233 COX11Q9Y6N1 276 aa4□□□□□ -1.77
SCLT1-207ENST00000506233 APOBP04114 4563 aaKnown RBP4□□□□□ -1.77
SCLT1-207ENST00000506233 UBE2D1P51668 147 aa4□□□□□ -1.77
SCLT1-207ENST00000506233 F8VRH5 84 aa4□□□□□ -1.77
SCLT1-207ENST00000506233 CRYBA4P53673 196 aa4□□□□□ -1.77
SCLT1-207ENST00000506233 XCL2Q9UBD3 114 aa4□□□□□ -1.77
SCLT1-207ENST00000506233 HSPB8Q9UJY1 196 aa4□□□□□ -1.77
SCLT1-207ENST00000506233 A0A087X002 238 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 M0R143 59 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 SNRPD3P62318 126 aaKnown RBP3.99□□□□□ -1.77
SCLT1-207ENST00000506233 SMAGPQ0VAQ4 97 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 SAMD13Q5VXD3 122 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 SMIM29Q86T20 159 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 AP1S3Q96PC3 154 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 A0A0J9YY99 117 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 SMIM9A6NGZ8 99 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 SMIM1B2RUZ4 78 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 HINT1P49773 126 aaPredicted RBP3.99□□□□□ -1.77
SCLT1-207ENST00000506233 PHLDA3Q9Y5J5 127 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 IGHV3-30P01768 117 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 IGKCP01834 107 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 IGHV3-30-5P0DP03 117 aa3.99□□□□□ -1.77
SCLT1-207ENST00000506233 TIMM8BQ9Y5J9 83 aaPredicted RBP3.99□□□□□ -1.77
SCLT1-207ENST00000506233 SRRM2Q9UQ35 2752 aaKnown RBP3.99□□□□□ -1.77
SCLT1-207ENST00000506233 EMP1P54849 157 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 TMEM263Q8WUH6 116 aaKnown RBP3.98□□□□□ -1.77
SCLT1-207ENST00000506233 BORCS7Q96B45 105 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 K7ERJ3 54 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 SOSTDC1Q6X4U4 206 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 Q6ZUT4 128 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 RHOHQ15669 191 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 FA2HQ7L5A8 372 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 DHRS4-AS1Q9P1J3 65 aa3.98□□□□□ -1.77
SCLT1-207ENST00000506233 Q8N1X5 172 aa3.97□□□□□ -1.77
SCLT1-207ENST00000506233 C1QTNF4Q9BXJ3 329 aa3.97□□□□□ -1.77
SCLT1-207ENST00000506233 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
SCLT1-207ENST00000506233 PRSS1P07477 247 aa3.97□□□□□ -1.77
SCLT1-207ENST00000506233 RNASE13Q5GAN3 156 aaKnown RBP3.97□□□□□ -1.77
SCLT1-207ENST00000506233 ORAOV1Q8WV07 137 aa3.97□□□□□ -1.77
SCLT1-207ENST00000506233 ZNF625Q96I27 306 aaPredicted RBP3.97□□□□□ -1.77
SCLT1-207ENST00000506233 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.97□□□□□ -1.77
SCLT1-207ENST00000506233 IGKV2-29A2NJV5 120 aaPredicted RBP3.97□□□□□ -1.77
SCLT1-207ENST00000506233 NUDT3O95989 172 aa3.97□□□□□ -1.77
SCLT1-207ENST00000506233 C9orf66Q5T8R8 295 aa3.97□□□□□ -1.77
SCLT1-207ENST00000506233 FAM19A5Q7Z5A7 132 aaPredicted RBP3.97□□□□□ -1.77
SCLT1-207ENST00000506233 GTSF1LQ9H1H1 148 aa3.97□□□□□ -1.77
SCLT1-207ENST00000506233 TRAV4A0A0B4J268 109 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 S100A7P31151 101 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 PRR3P79522 188 aaKnown RBP3.96□□□□□ -1.78
SCLT1-207ENST00000506233 CDC42SE2Q9NRR3 84 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 A0A0J9YXV3 536 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 I3L3M4 83 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 RBX1P62877 108 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 ORMDL2Q53FV1 153 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 CEND1Q8N111 149 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 LINC01600Q96MT4 127 aa3.96□□□□□ -1.78
SCLT1-207ENST00000506233 WNK1Q9H4A3 2382 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 TRAV8-3A0A0A6YYJ7 113 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 DPM2O94777 84 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 MGPP08493 103 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 PFN2P35080 140 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 NOTCH2Q04721 2471 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 SLC25A34Q6PIV7 304 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 PRADC1Q9BSG0 188 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 NOP10Q9NPE3 64 aaKnown RBP3.95□□□□□ -1.78
SCLT1-207ENST00000506233 CFC1BP0CG36 223 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 CFC1P0CG37 223 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 CHAC1Q9BUX1 264 aa3.95□□□□□ -1.78
SCLT1-207ENST00000506233 MYMXA0A1B0GTQ4 84 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 PMVKQ15126 192 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 TMEM97Q5BJF2 176 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 FAM74A4Q5TZK3 123 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 INSP01308 110 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 PLNP26678 52 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 NTN5Q8WTR8 489 aaPredicted RBP3.94□□□□□ -1.78
SCLT1-207ENST00000506233 TMEM141Q96I45 108 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 TIMM21Q9BVV7 248 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 SPANXB1Q9NS25 103 aaPredicted RBP3.94□□□□□ -1.78
SCLT1-207ENST00000506233 A8MWV9 139 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 OR11H12B2RN74 326 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 KIAA0087Q14695 138 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 KPRPQ5T749 579 aaPredicted RBP3.94□□□□□ -1.78
SCLT1-207ENST00000506233 TMEM101Q96IK0 257 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 SCGB3A1Q96QR1 104 aa3.94□□□□□ -1.78
SCLT1-207ENST00000506233 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.93□□□□□ -1.78
SCLT1-207ENST00000506233 NAA38Q9BRA0 125 aaKnown RBP3.93□□□□□ -1.78
SCLT1-207ENST00000506233 SMIM26A0A096LP01 95 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms