RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 GAGE2BQ13066 116 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 GAGE2EQ4V326 116 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 MEIG1Q5JSS6 88 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 LYPD5Q6UWN5 251 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 NTM-AS1Q6ZSK4 140 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 PRSS3P2Q8NHM4 247 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 CHCHD1Q96BP2 118 aaKnown RBP4.97□□□□□ -1.61
NUP54-204ENST00000506098 GAGE2DQ9UEU5 116 aa4.97□□□□□ -1.61
NUP54-204ENST00000506098 TRBV6-8A0A0A6YYG3 113 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 IGHV3-38A0A0C4DH36 116 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 C3orf84H3BNL1 204 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 NUPR1O60356 82 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 LAGE3Q14657 143 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 ESRGQ1W209 222 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 ORMDL2Q53FV1 153 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 LELP1Q5T871 98 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 CHCHD7Q9BUK0 85 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 AP5S1Q9NUS5 200 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 LYSTQ99698 3801 aa4.96□□□□□ -1.62
NUP54-204ENST00000506098 PLECQ15149 4684 aaKnown RBP4.96□□□□□ -1.62
NUP54-204ENST00000506098 DNAH6Q9C0G6 4158 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 TRBV25-1A0A075B6N4 114 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 IGHV1-24A0A0C4DH33 117 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 A0A0U1RRA0 63 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 LINC01549A6NIU2 74 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 H3BUT2 72 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 H7C423 109 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 COX8AP10176 69 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 VPS13DQ5THJ4 4388 aa4.95□□□□□ -1.62
NUP54-204ENST00000506098 A0A096LNJ9 63 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 CCDC179H3BU77 68 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 MT-ATP8P03928 68 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 FCER1GP30273 86 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 XGP55808 180 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 CASC10Q5T4H9 136 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 SPATA12Q7Z6I5 190 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 C20orf203Q8NBC4 194 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 PPDPFLQ8WWR9 84 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 RAB37Q96AX2 223 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 UPK3BQ9BT76 320 aa4.94□□□□□ -1.62
NUP54-204ENST00000506098 A0A1B0GUV1 79 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 SMIM13P0DJ93 91 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 CCL18P55774 89 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 LINC00336Q6ZUF6 198 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 ATOH7Q8N100 152 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 DEFB104AQ8WTQ1 72 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 TOMM6Q96B49 74 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 TMEM243Q9BU79 118 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 TIMM21Q9BVV7 248 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 LINC00588Q9Y4M8 146 aa4.93□□□□□ -1.62
NUP54-204ENST00000506098 DNAH1Q9P2D7 4330 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 SNCGO76070 127 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 APOMO95445 188 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 HBDP02042 147 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 RPL39P62891 51 aaKnown RBP4.92□□□□□ -1.62
NUP54-204ENST00000506098 C2orf66Q6UXQ4 117 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 PLEKHB2Q96CS7 222 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 HIGD1BQ9P298 99 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 PYGO1Q9Y3Y4 419 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 ALMS1Q8TCU4 4167 aa4.92□□□□□ -1.62
NUP54-204ENST00000506098 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.91□□□□□ -1.62
NUP54-204ENST00000506098 IGKV2-29A2NJV5 120 aaPredicted RBP4.91□□□□□ -1.62
NUP54-204ENST00000506098 PRSS29PA6NIE9 313 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 IGIPA6NJ69 53 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 E9PLD3 99 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 UBE2L6O14933 153 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 UQCRQO14949 82 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 LYRM7Q5U5X0 104 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 WFDC10BQ8IUB3 73 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 FAM19A2Q8N3H0 131 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 BAALCQ8WXS3 180 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 FAM104AQ969W3 186 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 TIMM17AQ99595 171 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 CHCHD5Q9BSY4 110 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 C1orf43Q9BWL3 253 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 PRO0461Q9UI25 63 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 UBE2D4Q9Y2X8 147 aa4.91□□□□□ -1.62
NUP54-204ENST00000506098 DNAH10OSP0CZ25 163 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 FGF6P10767 208 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 TMEM258P61165 79 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 MRPS36P82909 103 aaKnown RBP4.9□□□□□ -1.63
NUP54-204ENST00000506098 TAL2Q16559 108 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 LINC01556Q5JQF7 62 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 LGALS9CQ6DKI2 356 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 C2orf91Q6ZV80 131 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 LINC00526Q96FQ7 95 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 CDC42SE2Q9NRR3 84 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 KMT2AQ03164 3969 aa4.9□□□□□ -1.63
NUP54-204ENST00000506098 IGLV4-60A0A075B6I1 120 aa4.89□□□□□ -1.63
NUP54-204ENST00000506098 ATP5LO75964 103 aa4.89□□□□□ -1.63
NUP54-204ENST00000506098 LEPROTL1O95214 131 aa4.89□□□□□ -1.63
NUP54-204ENST00000506098 ETDBQ3ZM63 59 aa4.89□□□□□ -1.63
NUP54-204ENST00000506098 TMEM141Q96I45 108 aa4.89□□□□□ -1.63
NUP54-204ENST00000506098 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
NUP54-204ENST00000506098 SCGB3A1Q96QR1 104 aa4.89□□□□□ -1.63
NUP54-204ENST00000506098 Q9H8V8 135 aa4.89□□□□□ -1.63
NUP54-204ENST00000506098 IGLV4-3A0A075B6K6 122 aa4.88□□□□□ -1.63
NUP54-204ENST00000506098 CRYGAP11844 174 aa4.88□□□□□ -1.63
NUP54-204ENST00000506098 WFDC2Q14508 124 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms