RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ACACBO00763 2458 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 LAMB1P07942 1786 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 PXDNQ92626 1479 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 LYNX1G3V0Z9 82 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 NPFFO15130 113 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 TNFP01375 233 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT2AP02795 61 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 PRM1P04553 51 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1FP04733 61 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 LINC00694P0DN24 101 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 CCL8P80075 99 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1XP80297 61 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 KLK9Q2XQG4 91 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 DEFB109BQ30KR1 87 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 CFAP126Q5VTH2 177 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1MQ8N339 61 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 KCNRGQ8N5I3 272 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 TSTD1Q8NFU3 115 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 NPVFQ9HCQ7 196 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 COPZ2Q9P299 210 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 LINC00312Q9Y6C7 94 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 SZT2Q5T011 3432 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 ASPMQ8IZT6 3477 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 GOLGB1Q14789 3259 aaKnown RBP-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 AKAP11Q9UKA4 1901 aa-0.13□□□□□ -2.43
HMGB1P29-201ENST00000505659 CEP295Q9C0D2 2601 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 MKI67P46013 3256 aaKnown RBP-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 TLN1Q9Y490 2541 aaKnown RBP-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 SIPA1L3O60292 1781 aaPredicted RBP-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 UTRNP46939 3433 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 BRCA2P51587 3418 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 TSC2P49815 1807 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 PARP14Q460N5 1801 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 CLPSL1A2RUU4 121 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 K7EQZ3 153 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 DEFB4AO15263 64 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 ARPC5O15511 151 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1AP04731 61 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 COPZ1P61923 177 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1HP80294 61 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 ALX1Q15699 326 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 KRTAP19-5Q3LI72 72 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 DEFB121Q5J5C9 76 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 SMIM4Q8WVI0 70 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 AQP10Q96PS8 301 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 SEC11CQ9BY50 192 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 TMEM191AQ9H0A3 160 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 DPH3P1Q9H4G8 78 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 TPT1P8Q9HAU6 139 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 SCN3BQ9NY72 215 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 R4GMQ9 66 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 MTORP42345 2549 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 ZMYM4Q5VZL5 1548 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 RANBP2P49792 3224 aaKnown RBP-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 SMG6Q86US8 1419 aaKnown RBP-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 CASKIN1Q8WXD9 1431 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 VPS13AQ96RL7 3174 aa-0.14□□□□□ -2.43
HMGB1P29-201ENST00000505659 PLXNB2O15031 1838 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 ZNF518AQ6AHZ1 1483 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 IFT140Q96RY7 1462 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 SPTAN1Q13813 2472 aaKnown RBP-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 PITX3O75364 302 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 CCL18P55774 89 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 DEFB1P60022 68 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 HAMPP81172 84 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 SPAG11BQ08648 103 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 SMCO1Q147U7 214 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 SMIM21Q3B7S5 101 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 S100A7L2Q5SY68 101 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 Q8IZM0 81 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 COPS9Q8WXC6 57 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 ANP32BQ92688 251 aaKnown RBP-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 MT1LQ93083 61 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 TTTY10Q9BZA0 68 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 CCDC167Q9P0B6 97 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 MYOM3Q5VTT5 1437 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 CENPFP49454 3210 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 CDH23Q9H251 3354 aa-0.15□□□□□ -2.43
HMGB1P29-201ENST00000505659 IFT172Q9UG01 1749 aa-0.16□□□□□ -2.43
HMGB1P29-201ENST00000505659 DOCK1Q14185 1865 aa-0.16□□□□□ -2.43
HMGB1P29-201ENST00000505659 MUC22E2RYF6 1773 aaPredicted RBP-0.16□□□□□ -2.43
HMGB1P29-201ENST00000505659 CEP290O15078 2479 aa-0.16□□□□□ -2.43
HMGB1P29-201ENST00000505659 LCE6AA0A183 80 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 SPAARA0A1B0GVQ0 90 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 C9orf92A6NGG3 77 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 A8MTW9 85 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 LOC730098B7Z3J9 87 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 H3BNG1 76 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 SIX6O95475 246 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 PPP1R17O96001 155 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 MT1EP04732 61 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 RPS25P62851 125 aaKnown RBP-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 COX17Q14061 63 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 C12orf73Q69YU5 71 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 COX6B2Q6YFQ2 88 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 MAFIPQ8WZ33 124 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 LINC01600Q96MT4 127 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 PFDN5Q99471 154 aa-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 PAIP2BQ9ULR5 123 aaKnown RBP-0.16□□□□□ -2.44
HMGB1P29-201ENST00000505659 S4R3F8 94 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms