RNA–Protein interactions for RNA: ENST00000505149.1

LINC01088-202, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 624 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-202ENST00000505149 LINC01558Q9Y6Z2 57 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 MUC4Q99102 2169 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 ARHGEF5Q12774 1597 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 SAMD9Q5K651 1589 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 CEP170BQ9Y4F5 1589 aaPredicted RBP1.63□□□□□ -2.15
LINC01088-202ENST00000505149 CASP8AP2Q9UKL3 1982 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 PCNX2A6NKB5 2137 aa1.63□□□□□ -2.15
LINC01088-202ENST00000505149 NESP48681 1621 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 ADCY10Q96PN6 1610 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 PTPRDP23468 1912 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 GREB1Q4ZG55 1949 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 DIDO1Q9BTC0 2240 aaKnown RBP1.62□□□□□ -2.15
LINC01088-202ENST00000505149 M0R135 149 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 CTSGP08311 255 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 SERF2P84101 59 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 NREPQ16612 68 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 WFDC6Q9BQY6 131 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 LINC00846Q9NV44 126 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 CICQ96RK0 1608 aaPredicted RBP1.62□□□□□ -2.15
LINC01088-202ENST00000505149 LAMB1P07942 1786 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 LCTP09848 1927 aa1.62□□□□□ -2.15
LINC01088-202ENST00000505149 AFDNP55196 1824 aaKnown RBP1.61□□□□□ -2.15
LINC01088-202ENST00000505149 PLXNA2O75051 1894 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.61□□□□□ -2.15
LINC01088-202ENST00000505149 CTXND1A0A1B0GTU2 59 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 SMIM27A0A1W2PRY6 76 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 UQCR11O14957 56 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 MGPP08493 103 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 CCL3L1P16619 93 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 CCL18P55774 89 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 UBL5Q9BZL1 73 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 R4GN34 69 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 V9GYV3 84 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 PAPPAQ13219 1627 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 FREM3P0C091 2139 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 BTAF1O14981 1849 aa1.61□□□□□ -2.15
LINC01088-202ENST00000505149 PDCD11Q14690 1871 aaKnown RBP1.6□□□□□ -2.15
LINC01088-202ENST00000505149 TANC1Q9C0D5 1861 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 NYNRINQ9P2P1 1898 aaKnown RBP1.6□□□□□ -2.15
LINC01088-202ENST00000505149 MUC22E2RYF6 1773 aaPredicted RBP1.6□□□□□ -2.15
LINC01088-202ENST00000505149 KIAA1549Q9HCM3 1950 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 TRAV21A0A0B4J279 112 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 IGKV2-24A0A0C4DH68 120 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 PLNP26678 52 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 ENHOQ6UWT2 76 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 TMEM263Q8WUH6 116 aaKnown RBP1.6□□□□□ -2.15
LINC01088-202ENST00000505149 PATE1Q8WXA2 126 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 LINC00208Q96KT6 92 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 TTTY12Q9BZ98 90 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 PRO2289Q9P1D8 64 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 LTBP2Q14767 1821 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 SLX4Q8IY92 1834 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 UBR1Q8IWV7 1749 aa1.6□□□□□ -2.15
LINC01088-202ENST00000505149 EIF2AK4Q9P2K8 1649 aaKnown RBP1.59□□□□□ -2.15
LINC01088-202ENST00000505149 ADAMTS7Q9UKP4 1686 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 IGKV3OR2-268A0A0C4DH90 116 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 JMJD7-PLA2G4BH0Y9G9 81 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 H0Y9P7 68 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 K7EMI3 77 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 IGLV3-1P01715 115 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 RNASE3P12724 160 aaKnown RBP1.59□□□□□ -2.15
LINC01088-202ENST00000505149 PDE6GP18545 87 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 WFDC9Q8NEX5 89 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 PLAC8Q9NZF1 115 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 KLK9Q9UKQ9 250 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 DLG5Q8TDM6 1919 aa1.59□□□□□ -2.15
LINC01088-202ENST00000505149 LOC285556D6RIA3 1793 aa1.59□□□□□ -2.16
LINC01088-202ENST00000505149 ADGRB2O60241 1585 aa1.59□□□□□ -2.16
LINC01088-202ENST00000505149 LRP6O75581 1613 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 TRPM7Q96QT4 1865 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 NHSQ6T4R5 1651 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 PTPRSQ13332 1948 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 MALRD1Q5VYJ5 2156 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 CUL9Q8IWT3 2517 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 TRBV6-1A0A0K0K1D8 114 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 TRBV6-4A0A1B0GX49 114 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 ZNF137PP52743 207 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 KRTAP12-3P60328 96 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 KRTAP6-3Q3LI67 103 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 C10orf113Q5VZT2 155 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 WFDC10AQ9H1F0 79 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 CCL26Q9Y258 94 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 ALKQ9UM73 1620 aa1.58□□□□□ -2.16
LINC01088-202ENST00000505149 WDR90Q96KV7 1748 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 DOCK11Q5JSL3 2073 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 KIAA1549LQ6ZVL6 1849 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 SEC16AO15027 2179 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 SDK2Q58EX2 2172 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 MYO16Q9Y6X6 1858 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 ERCC6L2Q5T890 1561 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 J3QRE1 110 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 HCP5Q6MZN7 132 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 SPATA8Q6RVD6 105 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 ZCCHC13Q8WW36 166 aaKnown RBP1.57□□□□□ -2.16
LINC01088-202ENST00000505149 OBSCN-AS1Q96MR7 158 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 GAFA1Q96PS6 74 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 LRRC37A3O60309 1634 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 EML5Q05BV3 1969 aa1.57□□□□□ -2.16
LINC01088-202ENST00000505149 SIP14410 1827 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms