RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 HIST3H2BBQ8N257 126 aa6.87□□□□□ -1.31
RFC1-210ENST00000505077 MAP1LC3CQ9BXW4 147 aa6.87□□□□□ -1.31
RFC1-210ENST00000505077 CST9LQ9H4G1 147 aa6.87□□□□□ -1.31
RFC1-210ENST00000505077 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
RFC1-210ENST00000505077 IGKV3OR2-268A0A0C4DH90 116 aa6.86□□□□□ -1.31
RFC1-210ENST00000505077 C5orf52A6NGY3 159 aa6.86□□□□□ -1.31
RFC1-210ENST00000505077 PRSS1P07477 247 aa6.86□□□□□ -1.31
RFC1-210ENST00000505077 CD164L2Q6UWJ8 174 aa6.86□□□□□ -1.31
RFC1-210ENST00000505077 CHCHD10Q8WYQ3 142 aaPredicted RBP6.86□□□□□ -1.31
RFC1-210ENST00000505077 PSCAO43653 123 aa6.85□□□□□ -1.31
RFC1-210ENST00000505077 FABP4P15090 132 aa6.85□□□□□ -1.31
RFC1-210ENST00000505077 SNRPEP62304 92 aaKnown RBP6.85□□□□□ -1.31
RFC1-210ENST00000505077 HERVK_113P63121 156 aa6.85□□□□□ -1.31
RFC1-210ENST00000505077 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
RFC1-210ENST00000505077 SPATA12Q7Z6I5 190 aa6.85□□□□□ -1.31
RFC1-210ENST00000505077 FRAS1Q86XX4 4008 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 IGLV10-54A0A075B6I4 117 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 TINCRA0A1B0GVN0 87 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 F8VRH5 84 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 XCL1P47992 114 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 AKR1D1P51857 326 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 KRTAP26-1Q6PEX3 210 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 HIST1H2BLQ99880 126 aa6.84□□□□□ -1.31
RFC1-210ENST00000505077 IGLV5-45A0A087WSX0 123 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 IGHV3OR16-9A0A0B4J2B5 98 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 SYS1-DBNDD2H3BUS1 97 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 COX7A2LO14548 114 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 IGLC3P0DOY3 106 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 PLNP26678 52 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 FOXI1Q12951 378 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 PET117Q6UWS5 81 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 LINC01561Q8N1V8 128 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 CHAC1Q9BUX1 264 aa6.83□□□□□ -1.32
RFC1-210ENST00000505077 GEMIN7Q9H840 131 aaKnown RBP6.83□□□□□ -1.32
RFC1-210ENST00000505077 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
RFC1-210ENST00000505077 GAGE12HA6NDE8 117 aa6.82□□□□□ -1.32
RFC1-210ENST00000505077 LINC00336Q6ZUF6 198 aa6.82□□□□□ -1.32
RFC1-210ENST00000505077 DNAH2Q9P225 4427 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 IGLV4-69A0A075B6H9 119 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 A0A087WZ39 114 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 C20orf202A1L168 122 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 H3BRM9 83 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 APOMO95445 188 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 ZC2HC1BQ5TFG8 222 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 RYR2Q92736 4967 aa6.81□□□□□ -1.32
RFC1-210ENST00000505077 DNAH10Q8IVF4 4471 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 HYDINQ4G0P3 5121 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 A0A0J9YXV3 536 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 H0Y8G0 127 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 RTL8CO15255 209 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 DPM2O94777 84 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 KRTDAPP60985 99 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 LINC01545Q5VT33 79 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 LINC00469Q8N7U9 141 aa6.8□□□□□ -1.32
RFC1-210ENST00000505077 MRPL35Q9NZE8 188 aaKnown RBP6.8□□□□□ -1.32
RFC1-210ENST00000505077 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
RFC1-210ENST00000505077 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
RFC1-210ENST00000505077 MAPKAPK5-AS1Q8N8E1 139 aa6.79□□□□□ -1.32
RFC1-210ENST00000505077 OR10D4PQ8NGN7 298 aa6.79□□□□□ -1.32
RFC1-210ENST00000505077 GVQW2A0A096LPI5 108 aaPredicted RBP6.78□□□□□ -1.32
RFC1-210ENST00000505077 C11orf86A6NJI1 115 aa6.78□□□□□ -1.32
RFC1-210ENST00000505077 COX6A2Q02221 97 aa6.78□□□□□ -1.32
RFC1-210ENST00000505077 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
RFC1-210ENST00000505077 IGHV3-64A0A075B6Q5 118 aa6.77□□□□□ -1.33
RFC1-210ENST00000505077 A0A087WTM6 91 aa6.77□□□□□ -1.33
RFC1-210ENST00000505077 LRCOL1A6NCL2 159 aa6.77□□□□□ -1.33
RFC1-210ENST00000505077 USP17L23D6RBM5 183 aa6.77□□□□□ -1.33
RFC1-210ENST00000505077 IGKCP01834 107 aa6.77□□□□□ -1.33
RFC1-210ENST00000505077 ZNF22P17026 224 aaPredicted RBP6.77□□□□□ -1.33
RFC1-210ENST00000505077 C5orf38Q86SI9 138 aa6.77□□□□□ -1.33
RFC1-210ENST00000505077 C15orf56Q8N910 161 aa6.77□□□□□ -1.33
RFC1-210ENST00000505077 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
RFC1-210ENST00000505077 SMIM1B2RUZ4 78 aa6.76□□□□□ -1.33
RFC1-210ENST00000505077 F8WDY8 70 aa6.76□□□□□ -1.33
RFC1-210ENST00000505077 TMEM170BQ5T4T1 132 aa6.76□□□□□ -1.33
RFC1-210ENST00000505077 NTN5Q8WTR8 489 aaPredicted RBP6.76□□□□□ -1.33
RFC1-210ENST00000505077 DNAH17Q9UFH2 4485 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 IGLV5-39A0A0G2JS06 123 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 hDV102S1A0JD36 115 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 HERVK_113P61574 105 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 SFTA2Q6UW10 78 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 Q8IZM0 81 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 Q8N814 137 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 ORAOV1Q8WV07 137 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 C2orf48Q96LS8 159 aa6.75□□□□□ -1.33
RFC1-210ENST00000505077 TMEM223A0PJW6 202 aa6.74□□□□□ -1.33
RFC1-210ENST00000505077 CXCL5P42830 114 aa6.74□□□□□ -1.33
RFC1-210ENST00000505077 CNBPP62633 177 aaKnown RBP6.74□□□□□ -1.33
RFC1-210ENST00000505077 SPAG11BQ08648 103 aa6.74□□□□□ -1.33
RFC1-210ENST00000505077 RYR3Q15413 4870 aa6.74□□□□□ -1.33
RFC1-210ENST00000505077 FAT2Q9NYQ8 4349 aa6.73□□□□□ -1.33
RFC1-210ENST00000505077 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.73□□□□□ -1.33
RFC1-210ENST00000505077 LECT2O14960 151 aa6.73□□□□□ -1.33
RFC1-210ENST00000505077 PRSS2P07478 247 aa6.73□□□□□ -1.33
RFC1-210ENST00000505077 SPINK8P0C7L1 97 aa6.73□□□□□ -1.33
RFC1-210ENST00000505077 WFDC2Q14508 124 aa6.73□□□□□ -1.33
RFC1-210ENST00000505077 PMCHL2Q9BQD1 86 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms