RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 G3V4G9 280 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 DPM2O94777 84 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 PLNP26678 52 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 KRTAP10-1P60331 282 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 UBE2D3P61077 147 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 DAD1P61803 113 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 UBE2D2P62837 147 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 FAM222AQ5U5X8 452 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 ZNF664Q8N3J9 261 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 SLC25A29Q8N8R3 303 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 GTSF1LQ9H1H1 148 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 PRO0255Q9UI72 69 aa3.33□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGLV4-3A0A075B6K6 122 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 ATP5G1P05496 136 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 P0DMU3 169 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 FAM231AP0DMU4 169 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 FAM231CP0DMU5 169 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 LINC00694P0DN24 101 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 DEFB130BP0DP73 79 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 DEFB130AP0DP74 79 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 EMP1P54849 157 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 MRPS36P82909 103 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 PMVKQ15126 192 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 KRTAP21-3Q3LHN1 58 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 SPATA45Q537H7 98 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 REG3GQ6UW15 175 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 NEGR1Q7Z3B1 354 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 MRPL52Q86TS9 123 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 ZNRF2Q8NHG8 242 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 BAALCQ8WXS3 180 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 CHCHD5Q9BSY4 110 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 HHLA3Q9XRX5 114 aa3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 CSDC2Q9Y534 153 aaKnown RBP3.32□□□□□ -1.88
DEPDC1B-203ENST00000505017 MGAM2Q2M2H8 2515 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 H3BNG1 76 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGKCP01834 107 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 ZNF25P17030 456 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 PMCHL2Q9BQD1 86 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 MIEN1Q9BRT3 115 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 TMEM243Q9BU79 118 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 CHCHD7Q9BUK0 85 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 UQCR10Q9UDW1 63 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 PRO0461Q9UI25 63 aa3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 CHTOPQ9Y3Y2 248 aaKnown RBP3.31□□□□□ -1.88
DEPDC1B-203ENST00000505017 NOTCH1P46531 2555 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 TRBV25-1A0A075B6N4 114 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 TRBV6-8A0A0A6YYG3 113 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 H0Y8G0 127 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 DLEU1O43261 78 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGLC3P0DOY3 106 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 DDTP30046 118 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 HERVK_113P61574 105 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 RPL39P62891 51 aaKnown RBP3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 SEC11AP67812 179 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 MRPL23Q16540 153 aaKnown RBP3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 SBSPONQ8IVN8 264 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 ATP6V0E2Q8NHE4 81 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 AMELXQ99217 191 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 TM2D3Q9BRN9 247 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 C2orf88Q9BSF0 95 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 VCX2Q9H322 139 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 CST9LQ9H4G1 147 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 MRPL35Q9NZE8 188 aaKnown RBP3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 UBE2D4Q9Y2X8 147 aa3.3□□□□□ -1.88
DEPDC1B-203ENST00000505017 PKD1L1Q8TDX9 2849 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 C11orf86A6NJI1 115 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 PCP4L1A6NKN8 68 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 K7EIL1 84 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 UBE2L6O14933 153 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 COX8AP10176 69 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 SRSF9Q13242 221 aaKnown RBP eCLIP3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 CFAP161Q6P656 301 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 SLC25A34Q6PIV7 304 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 Q6ZVH6 145 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 FAM19A3Q7Z5A8 133 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 ATOH7Q8N100 152 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 OR5A1Q8NGJ0 315 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 TMEM101Q96IK0 257 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 PRO1933Q9H354 126 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 Q9UF83 564 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 MRPS16Q9Y3D3 137 aaKnown RBP3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 ICOSQ9Y6W8 199 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 NBEAL2Q6ZNJ1 2754 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 NBEAL1Q6ZS30 2694 aa3.29□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGLV4-69A0A075B6H9 119 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 LOC100131303A0A0U1RQF7 123 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 TINCRA0A1B0GVN0 87 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 IGKV2-29A2NJV5 120 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 F5H768 121 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 SIVA1O15304 175 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 CCL25O15444 150 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 FGF6P10767 208 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 HNRNPA3P51991 378 aaKnown RBP3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 DEFA6Q01524 100 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 C12orf74Q32Q52 190 aa3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 LBHQ53QV2 105 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1B-203ENST00000505017 AMMECR1LQ6DCA0 310 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms