RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 TMEM223A0PJW6 202 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 CLPSL1A2RUU4 121 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 IGIPA6NJ69 53 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 H3BUA1 57 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 NDUFA4O00483 81 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 ACYP1P07311 99 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 PRB3Q04118 309 aaPredicted RBP2.96□□□□□ -1.94
RFC1-208ENST00000504849 CASC10Q5T4H9 136 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 SFTA2Q6UW10 78 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 TMEM263Q8WUH6 116 aaKnown RBP2.96□□□□□ -1.94
RFC1-208ENST00000504849 PTH2Q96A98 100 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 RPL39LQ96EH5 51 aaKnown RBP2.96□□□□□ -1.94
RFC1-208ENST00000504849 TMEM101Q96IK0 257 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 TMEM126AQ9H061 195 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 TANC2Q9HCD6 1990 aa2.96□□□□□ -1.94
RFC1-208ENST00000504849 DOCK10Q96BY6 2186 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 ICE1Q9Y2F5 2266 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 NOTCH1P46531 2555 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 STAB1Q9NY15 2570 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 IGHV3OR16-8A0A075B7F1 116 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 TRAV41A0A0B4J266 112 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 IGHV3OR16-9A0A0B4J2B5 98 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 TRBV27A0A0K0K1C4 114 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 LYNX1G3V0Z9 82 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 H7C2G1 150 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 LGALS9O00182 355 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 IGHV3-33P01772 117 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 LYNX1P0DP58 116 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 RNASE4P34096 147 aaKnown RBP2.95□□□□□ -1.94
RFC1-208ENST00000504849 PRR3P79522 188 aaKnown RBP2.95□□□□□ -1.94
RFC1-208ENST00000504849 CD164Q04900 197 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 ZFAND2AQ8N6M9 145 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 C15orf53Q8NAA6 179 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 KLHL30-AS1Q8NEE0 82 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 USMG5Q96IX5 58 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 ODF3Q96PU9 254 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 ZNF702PQ9H963 129 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 MOB4Q9Y3A3 225 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 HIVEP3Q5T1R4 2406 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 SDK1Q7Z5N4 2213 aa2.95□□□□□ -1.94
RFC1-208ENST00000504849 DIDO1Q9BTC0 2240 aaKnown RBP2.95□□□□□ -1.94
RFC1-208ENST00000504849 IGHV3-74A0A0B4J1X5 117 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 A0A1W2PPR1 153 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 I3L3M4 83 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 TIMM17BO60830 172 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 ATP5G1P05496 136 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 CRYGDP07320 174 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 CRIP2P52943 208 aaPredicted RBP2.94□□□□□ -1.94
RFC1-208ENST00000504849 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
RFC1-208ENST00000504849 CIRBPQ14011 172 aaKnown RBP2.94□□□□□ -1.94
RFC1-208ENST00000504849 ZNF56Q15929 161 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 FBXL19-AS1Q494R0 122 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 PRR9Q5T870 116 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 GPHB5Q86YW7 130 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 MUSTN1Q8IVN3 82 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 FAM19A4Q96LR4 140 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 TIMM21Q9BVV7 248 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 IMUPQ9GZP8 106 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 ICOSQ9Y6W8 199 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 DYSFO75923 2080 aa2.94□□□□□ -1.94
RFC1-208ENST00000504849 PRR14LQ5THK1 2151 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 IGHV3-49A0A0A0MS15 119 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 TRAV4A0A0B4J268 109 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 A0A0J9YXY3 114 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 TRBV7-7A0A0K0K1E9 115 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 KLLNB2CW77 178 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 NPFFO15130 113 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 CHTF8P0CG12 524 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 CD28P10747 220 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 RNASE3P12724 160 aaKnown RBP2.93□□□□□ -1.94
RFC1-208ENST00000504849 ZNF22P17026 224 aaPredicted RBP2.93□□□□□ -1.94
RFC1-208ENST00000504849 EMP1P54849 157 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 TSPEAR-AS2P59090 65 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 MIAQ16674 131 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 DEFB121Q5J5C9 76 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 C5orf56Q8N8D9 126 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 C20orf203Q8NBC4 194 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 ZNRF2Q8NHG8 242 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 VSIG2Q96IQ7 327 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 AMELXQ99217 191 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 KIF25-AS1Q9Y6Z4 181 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 DNAJC13O75165 2243 aa2.93□□□□□ -1.94
RFC1-208ENST00000504849 DSCAML1Q8TD84 2053 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 DSCAMO60469 2012 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 IGHV1-58A0A0C4DH39 117 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 G3V318 75 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 CCDC179H3BU77 68 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 H7C423 109 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 LST1O00453 97 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 GNRH2O43555 120 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 LINC00315P59091 139 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 SNRPD3P62318 126 aaKnown RBP2.92□□□□□ -1.94
RFC1-208ENST00000504849 RPL39P62891 51 aaKnown RBP2.92□□□□□ -1.94
RFC1-208ENST00000504849 MEIG1Q5JSS6 88 aa2.92□□□□□ -1.94
RFC1-208ENST00000504849 FAM74A4Q5TZK3 123 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms