RNA–Protein interactions for RNA: ENST00000504466.1

HMGCR-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 1,107 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-204ENST00000504466 ZNRF2Q8NHG8 242 aa3.61□□□□□ -1.83
HMGCR-204ENST00000504466 TMEM141Q96I45 108 aa3.61□□□□□ -1.83
HMGCR-204ENST00000504466 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
HMGCR-204ENST00000504466 CYSLTR1Q9Y271 337 aa3.61□□□□□ -1.83
HMGCR-204ENST00000504466 TRBV7-3A0A075B6L6 115 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 TRGV2A0A075B6R0 118 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 IGKV2D-26A0A0A0MRZ7 120 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 LOC100131303A0A0U1RQF7 123 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 LINC01549A6NIU2 74 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 F8VRH5 84 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 G3V4G9 280 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 IGKCP01834 107 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 G0S2P27469 103 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 EMP1P54849 157 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 Q6ZN92 141 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 OR11H2Q8NH07 326 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 AMELXQ99217 191 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 CST9LQ9H4G1 147 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 UQCR10Q9UDW1 63 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 CELA1Q9UNI1 258 aa3.6□□□□□ -1.83
HMGCR-204ENST00000504466 NOTCH1P46531 2555 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 LYRM9A8MSI8 78 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 DEFB4AO15263 64 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 DPM2O94777 84 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 COX8AP10176 69 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 MIFP14174 115 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 CTAG1AP78358 180 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 PMVKQ15126 192 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 FAM222AQ5U5X8 452 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 CEMP1Q6PRD7 247 aaPredicted RBP3.59□□□□□ -1.83
HMGCR-204ENST00000504466 C2orf91Q6ZV80 131 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 BOD1L2Q8IYS8 172 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 SNHG12Q9BXW3 62 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 UBE2D4Q9Y2X8 147 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 CHTOPQ9Y3Y2 248 aaKnown RBP3.59□□□□□ -1.83
HMGCR-204ENST00000504466 TENM3Q9P273 2699 aa3.59□□□□□ -1.83
HMGCR-204ENST00000504466 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.58□□□□□ -1.84
HMGCR-204ENST00000504466 TRGV4A0A0C4DH28 118 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 IGKV2-29A2NJV5 120 aaPredicted RBP3.58□□□□□ -1.84
HMGCR-204ENST00000504466 C11orf86A6NJI1 115 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 KRTAP16-1A8MUX0 517 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 DLEU1O43261 78 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 DEFB130BP0DP73 79 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 DEFB130AP0DP74 79 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 CRYBA4P53673 196 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 TCTAP57738 103 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 DEFA6Q01524 100 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 COTL1Q14019 142 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 DAZ4Q86SG3 579 aaKnown RBP3.58□□□□□ -1.84
HMGCR-204ENST00000504466 PCP2Q8IVA1 136 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 VSIG2Q96IQ7 327 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 TIMM21Q9BVV7 248 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 TTTY13Q9BZ97 58 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 GTSF1LQ9H1H1 148 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 DAZ3Q9NR90 486 aaKnown RBP3.58□□□□□ -1.84
HMGCR-204ENST00000504466 ZMAT5Q9UDW3 170 aaKnown RBP3.58□□□□□ -1.84
HMGCR-204ENST00000504466 MRPS16Q9Y3D3 137 aaKnown RBP3.58□□□□□ -1.84
HMGCR-204ENST00000504466 NBEAL1Q6ZS30 2694 aa3.58□□□□□ -1.84
HMGCR-204ENST00000504466 HUWE1Q7Z6Z7 4374 aaKnown RBP3.58□□□□□ -1.84
HMGCR-204ENST00000504466 HSBP1L1C9JCN9 74 aa3.57□□□□□ -1.84
HMGCR-204ENST00000504466 PLNP26678 52 aa3.57□□□□□ -1.84
HMGCR-204ENST00000504466 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
HMGCR-204ENST00000504466 MGAM2Q2M2H8 2515 aa3.57□□□□□ -1.84
HMGCR-204ENST00000504466 KPRPQ5T749 579 aaPredicted RBP3.57□□□□□ -1.84
HMGCR-204ENST00000504466 SLC25A34Q6PIV7 304 aa3.57□□□□□ -1.84
HMGCR-204ENST00000504466 MRPL52Q86TS9 123 aaKnown RBP3.57□□□□□ -1.84
HMGCR-204ENST00000504466 C2orf88Q9BSF0 95 aa3.57□□□□□ -1.84
HMGCR-204ENST00000504466 RETNQ9HD89 108 aa3.57□□□□□ -1.84
HMGCR-204ENST00000504466 SPANXA1Q9NS26 97 aa3.57□□□□□ -1.84
HMGCR-204ENST00000504466 CSDC2Q9Y534 153 aaKnown RBP3.57□□□□□ -1.84
HMGCR-204ENST00000504466 A0A0J9YXV3 536 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 E9PLD3 99 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 K7EIL1 84 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 M0R143 59 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 SIVA1O15304 175 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 ZNF22P17026 224 aaPredicted RBP3.56□□□□□ -1.84
HMGCR-204ENST00000504466 HNRNPA3P51991 378 aaKnown RBP3.56□□□□□ -1.84
HMGCR-204ENST00000504466 C12orf74Q32Q52 190 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 RNASE13Q5GAN3 156 aaKnown RBP3.56□□□□□ -1.84
HMGCR-204ENST00000504466 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 Q6ZUT4 128 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 FAM19A3Q7Z5A8 133 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 PRADC1Q9BSG0 188 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 PRO0255Q9UI72 69 aa3.56□□□□□ -1.84
HMGCR-204ENST00000504466 DNAH9Q9NYC9 4486 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 TRBV6-8A0A0A6YYG3 113 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 TMEM223A0PJW6 202 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 PRB2P02812 416 aaPredicted RBP3.55□□□□□ -1.84
HMGCR-204ENST00000504466 SPART-AS1P0CW21 52 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 NMUP48645 174 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 UBE2D1P51668 147 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 TSPEAR-AS2P59090 65 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 DAD1P61803 113 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 REG3GQ6UW15 175 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 ATP6V0E2Q8NHE4 81 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 VCX2Q9H322 139 aa3.55□□□□□ -1.84
HMGCR-204ENST00000504466 C11orf68Q9H3H3 251 aaKnown RBP3.55□□□□□ -1.84
HMGCR-204ENST00000504466 CDC42SE2Q9NRR3 84 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms