RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 LINC00469Q8N7U9 141 aa6.91□□□□□ -1.3
LSM6-204ENST00000504181 CYTL1Q9NRR1 136 aa6.91□□□□□ -1.3
LSM6-204ENST00000504181 TRBV30A0A0K0K1B3 111 aa6.9□□□□□ -1.3
LSM6-204ENST00000504181 MAP1LC3B2A6NCE7 125 aa6.9□□□□□ -1.3
LSM6-204ENST00000504181 RPL37AP8A6NKH3 93 aa6.9□□□□□ -1.3
LSM6-204ENST00000504181 PAGE4O60829 102 aa6.9□□□□□ -1.3
LSM6-204ENST00000504181 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
LSM6-204ENST00000504181 Q6ZUT4 128 aa6.9□□□□□ -1.3
LSM6-204ENST00000504181 MRPL55Q7Z7F7 128 aaKnown RBP6.9□□□□□ -1.3
LSM6-204ENST00000504181 PACRGQ96M98 296 aaPredicted RBP6.9□□□□□ -1.3
LSM6-204ENST00000504181 MARVELD1Q9BSK0 173 aa6.9□□□□□ -1.3
LSM6-204ENST00000504181 MAP1LC3BQ9GZQ8 125 aa6.9□□□□□ -1.3
LSM6-204ENST00000504181 FOXA3P55318 350 aaPredicted RBP6.89□□□□□ -1.31
LSM6-204ENST00000504181 PCOTHQ58A44 107 aa6.89□□□□□ -1.31
LSM6-204ENST00000504181 C2orf82Q6UX34 121 aa6.89□□□□□ -1.31
LSM6-204ENST00000504181 IFNA1P01562 189 aa6.88□□□□□ -1.31
LSM6-204ENST00000504181 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
LSM6-204ENST00000504181 XAGE1AQ9HD64 81 aa6.88□□□□□ -1.31
LSM6-204ENST00000504181 IGHV3OR16-9A0A0B4J2B5 98 aa6.87□□□□□ -1.31
LSM6-204ENST00000504181 XKRY2A2RUG3 117 aa6.87□□□□□ -1.31
LSM6-204ENST00000504181 TEX261Q6UWH6 196 aa6.87□□□□□ -1.31
LSM6-204ENST00000504181 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
LSM6-204ENST00000504181 CSDC2Q9Y534 153 aaKnown RBP6.87□□□□□ -1.31
LSM6-204ENST00000504181 TRBV6-5A0A0K0K1A5 114 aa6.86□□□□□ -1.31
LSM6-204ENST00000504181 TMUB2Q71RG4 321 aa6.86□□□□□ -1.31
LSM6-204ENST00000504181 LINC00167Q96N53 147 aa6.86□□□□□ -1.31
LSM6-204ENST00000504181 KIR2DL4Q99706 377 aa6.86□□□□□ -1.31
LSM6-204ENST00000504181 ST20Q9HBF5 79 aa6.86□□□□□ -1.31
LSM6-204ENST00000504181 TP73-AS1Q9UF72 201 aa6.86□□□□□ -1.31
LSM6-204ENST00000504181 ZNF727A8MUV8 499 aa6.85□□□□□ -1.31
LSM6-204ENST00000504181 UPK1BO75841 260 aa6.85□□□□□ -1.31
LSM6-204ENST00000504181 RPL35P42766 123 aaKnown RBP6.85□□□□□ -1.31
LSM6-204ENST00000504181 AKR1C8PQ5T2L2 129 aa6.85□□□□□ -1.31
LSM6-204ENST00000504181 LCE1DQ5T752 114 aa6.85□□□□□ -1.31
LSM6-204ENST00000504181 NDUFA12Q9UI09 145 aa6.85□□□□□ -1.31
LSM6-204ENST00000504181 GAGE10A6NGK3 116 aa6.84□□□□□ -1.31
LSM6-204ENST00000504181 PFDN1O60925 122 aa6.84□□□□□ -1.31
LSM6-204ENST00000504181 RPL7L1Q6DKI1 246 aaKnown RBP6.84□□□□□ -1.31
LSM6-204ENST00000504181 C9orf62Q8N4C0 152 aa6.84□□□□□ -1.31
LSM6-204ENST00000504181 SSNA1O43805 119 aa6.83□□□□□ -1.32
LSM6-204ENST00000504181 PRLHP81277 87 aa6.83□□□□□ -1.32
LSM6-204ENST00000504181 SMAGPQ0VAQ4 97 aa6.83□□□□□ -1.32
LSM6-204ENST00000504181 SMIM15Q7Z3B0 74 aa6.83□□□□□ -1.32
LSM6-204ENST00000504181 FAM210AQ96ND0 272 aa6.83□□□□□ -1.32
LSM6-204ENST00000504181 CNFNQ9BYD5 112 aa6.83□□□□□ -1.32
LSM6-204ENST00000504181 FCER1GP30273 86 aa6.82□□□□□ -1.32
LSM6-204ENST00000504181 POLR2KP53803 58 aaKnown RBP6.82□□□□□ -1.32
LSM6-204ENST00000504181 CENPWQ5EE01 88 aa6.82□□□□□ -1.32
LSM6-204ENST00000504181 Q8NBF4 154 aa6.82□□□□□ -1.32
LSM6-204ENST00000504181 TRBV27A0A0K0K1C4 114 aa6.81□□□□□ -1.32
LSM6-204ENST00000504181 A0A1B0GV50 99 aa6.81□□□□□ -1.32
LSM6-204ENST00000504181 PNRC1Q12796 327 aaPredicted RBP6.81□□□□□ -1.32
LSM6-204ENST00000504181 RAB19A4D1S5 217 aa6.8□□□□□ -1.32
LSM6-204ENST00000504181 CFC1P0CG37 223 aa6.8□□□□□ -1.32
LSM6-204ENST00000504181 KRTAP19-4Q3LI73 84 aa6.8□□□□□ -1.32
LSM6-204ENST00000504181 ENKURQ8TC29 256 aa6.8□□□□□ -1.32
LSM6-204ENST00000504181 TGIF2-C20orf24A0A0A6YYL0 155 aa6.79□□□□□ -1.32
LSM6-204ENST00000504181 SPINK1P00995 79 aa6.79□□□□□ -1.32
LSM6-204ENST00000504181 RPL32P62910 135 aaKnown RBP6.79□□□□□ -1.32
LSM6-204ENST00000504181 PLEKHB2Q96CS7 222 aa6.79□□□□□ -1.32
LSM6-204ENST00000504181 BORCS7-ASMTA0A0B4J1R7 106 aa6.78□□□□□ -1.32
LSM6-204ENST00000504181 FAM19A2Q8N3H0 131 aa6.78□□□□□ -1.32
LSM6-204ENST00000504181 TIMM21Q9BVV7 248 aa6.78□□□□□ -1.32
LSM6-204ENST00000504181 IFITM10A6NMD0 228 aa6.77□□□□□ -1.33
LSM6-204ENST00000504181 LCE4AQ5TA78 99 aa6.77□□□□□ -1.33
LSM6-204ENST00000504181 FAM19A1Q7Z5A9 133 aa6.77□□□□□ -1.33
LSM6-204ENST00000504181 Q8N377 158 aa6.77□□□□□ -1.33
LSM6-204ENST00000504181 FAM104AQ969W3 186 aa6.77□□□□□ -1.33
LSM6-204ENST00000504181 KRTAP4-7Q9BYR0 210 aa6.77□□□□□ -1.33
LSM6-204ENST00000504181 IGKV2-28A0A075B6P5 120 aa6.76□□□□□ -1.33
LSM6-204ENST00000504181 IGKV2D-28P01615 120 aa6.76□□□□□ -1.33
LSM6-204ENST00000504181 VCYO14598 125 aa6.75□□□□□ -1.33
LSM6-204ENST00000504181 RPL39P62891 51 aaKnown RBP6.75□□□□□ -1.33
LSM6-204ENST00000504181 KCNRGQ8N5I3 272 aa6.75□□□□□ -1.33
LSM6-204ENST00000504181 NUDT10Q8NFP7 164 aa6.75□□□□□ -1.33
LSM6-204ENST00000504181 SFT2D1Q8WV19 159 aa6.75□□□□□ -1.33
LSM6-204ENST00000504181 TMEM18Q96B42 140 aa6.75□□□□□ -1.33
LSM6-204ENST00000504181 NUDT11Q96G61 164 aa6.75□□□□□ -1.33
LSM6-204ENST00000504181 TOMM7Q9P0U1 55 aa6.75□□□□□ -1.33
LSM6-204ENST00000504181 GNG4P50150 75 aa6.74□□□□□ -1.33
LSM6-204ENST00000504181 CKS1BP61024 79 aa6.74□□□□□ -1.33
LSM6-204ENST00000504181 HBBP68871 147 aa6.74□□□□□ -1.33
LSM6-204ENST00000504181 KRTAP6-3Q3LI67 103 aa6.74□□□□□ -1.33
LSM6-204ENST00000504181 SCO1O75880 301 aa6.73□□□□□ -1.33
LSM6-204ENST00000504181 PRSS2P07478 247 aa6.73□□□□□ -1.33
LSM6-204ENST00000504181 CBLN2Q8IUK8 224 aa6.73□□□□□ -1.33
LSM6-204ENST00000504181 NKAPP1Q8N9T2 125 aa6.73□□□□□ -1.33
LSM6-204ENST00000504181 C11orf52Q96A22 123 aa6.73□□□□□ -1.33
LSM6-204ENST00000504181 KRTAP9-8Q9BYQ0 159 aa6.73□□□□□ -1.33
LSM6-204ENST00000504181 SMKR1H3BMG3 65 aa6.72□□□□□ -1.33
LSM6-204ENST00000504181 SMIM12Q96EX1 92 aa6.72□□□□□ -1.33
LSM6-204ENST00000504181 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
LSM6-204ENST00000504181 TMEM238C9JI98 176 aa6.71□□□□□ -1.34
LSM6-204ENST00000504181 CCL20P78556 96 aa6.71□□□□□ -1.34
LSM6-204ENST00000504181 HIGD2AQ9BW72 106 aa6.71□□□□□ -1.34
LSM6-204ENST00000504181 TRBV20OR9-2A0A075B6H5 130 aa6.7□□□□□ -1.34
LSM6-204ENST00000504181 SLC25A20O43772 301 aa6.7□□□□□ -1.34
LSM6-204ENST00000504181 C6orf226Q5I0X4 101 aa6.7□□□□□ -1.34
LSM6-204ENST00000504181 FAM213BQ8TBF2 198 aa6.7□□□□□ -1.34
LSM6-204ENST00000504181 TMEM126AQ9H061 195 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms