RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 IGKV2-28A0A075B6P5 120 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 NDUFA7O95182 113 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 IGKV2D-28P01615 120 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 USP17L23D6RBM5 183 aa12.03□□□□□ -0.48
PCDHA1-203ENST00000504120 LINC00526Q96FQ7 95 aa12.02□□□□□ -0.48
PCDHA1-203ENST00000504120 POM121L12Q8N7R1 296 aa12.02□□□□□ -0.49
PCDHA1-203ENST00000504120 LINC00310P59036 64 aa12.02□□□□□ -0.49
PCDHA1-203ENST00000504120 ODF3L2Q3SX64 289 aa12.02□□□□□ -0.49
PCDHA1-203ENST00000504120 BRI3O95415 125 aa12.01□□□□□ -0.49
PCDHA1-203ENST00000504120 HIVEP3Q5T1R4 2406 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 HCFC1P51610 2035 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 LOC107984640A0A0U1RRK4 108 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 C7orf33Q8WU49 177 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 URB1-AS1Q96HZ7 61 aa12□□□□□ -0.49
PCDHA1-203ENST00000504120 LINC00242Q5T6M2 205 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 LRCOL1A6NCL2 159 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 C3orf84H3BNL1 204 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 COX8CQ7Z4L0 72 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 ZNF73O43830 326 aaPredicted RBP11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 CASC2Q6XLA1 102 aa11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
PCDHA1-203ENST00000504120 EDN2P20800 178 aa11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 WFDC10BQ8IUB3 73 aa11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 ZNF580Q9UK33 172 aa11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 ATG2AQ2TAZ0 1938 aa11.98□□□□□ -0.49
PCDHA1-203ENST00000504120 TLN1Q9Y490 2541 aaKnown RBP11.97□□□□□ -0.49
PCDHA1-203ENST00000504120 BRK1Q8WUW1 75 aa11.97□□□□□ -0.49
PCDHA1-203ENST00000504120 SERP2Q8N6R1 65 aa11.97□□□□□ -0.49
PCDHA1-203ENST00000504120 IGHV4-30-4P0DP06 118 aa11.96□□□□□ -0.49
PCDHA1-203ENST00000504120 MYO18BQ8IUG5 2567 aa11.96□□□□□ -0.49
PCDHA1-203ENST00000504120 TANC2Q9HCD6 1990 aa11.96□□□□□ -0.49
PCDHA1-203ENST00000504120 CCDC168Q8NDH2 2452 aa11.96□□□□□ -0.49
PCDHA1-203ENST00000504120 CYSRT1A8MQ03 144 aa11.96□□□□□ -0.5
PCDHA1-203ENST00000504120 NDUFC1O43677 76 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 IGLV1-51P01701 117 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 CHCHD7Q9BUK0 85 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 PIEZO2Q9H5I5 2752 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 IGLV2-18A0A075B6J9 118 aa11.95□□□□□ -0.5
PCDHA1-203ENST00000504120 COL4A2P08572 1712 aa11.94□□□□□ -0.5
PCDHA1-203ENST00000504120 SMIM1B2RUZ4 78 aa11.94□□□□□ -0.5
PCDHA1-203ENST00000504120 PLA2G2AP14555 144 aa11.94□□□□□ -0.5
PCDHA1-203ENST00000504120 ATP5EP56381 51 aaPredicted RBP11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 FAM19A3Q7Z5A8 133 aa11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 PPDPFQ9H3Y8 114 aa11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 C2CD3Q4AC94 2353 aa11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
PCDHA1-203ENST00000504120 A0A0J9YWU9 116 aa11.92□□□□□ -0.5
PCDHA1-203ENST00000504120 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
PCDHA1-203ENST00000504120 NDUFC2-KCTD14E9PQ53 114 aa11.92□□□□□ -0.5
PCDHA1-203ENST00000504120 RPL37AP8A6NKH3 93 aa11.92□□□□□ -0.5
PCDHA1-203ENST00000504120 CPAMD8Q8IZJ3 1885 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 EGFEM1PQ0D2K5 195 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 MPLKIPQ8TAP9 179 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 OXLD1Q5BKU9 147 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 EXPH5Q8NEV8 1989 aa11.91□□□□□ -0.5
PCDHA1-203ENST00000504120 KRTAP10-9P60411 292 aa11.9□□□□□ -0.5
PCDHA1-203ENST00000504120 CSDC2Q9Y534 153 aaKnown RBP11.9□□□□□ -0.5
PCDHA1-203ENST00000504120 Q6JHZ5 121 aa11.9□□□□□ -0.5
PCDHA1-203ENST00000504120 A0A1W2PPR1 153 aa11.89□□□□□ -0.51
PCDHA1-203ENST00000504120 XGP55808 180 aa11.89□□□□□ -0.51
PCDHA1-203ENST00000504120 UNQ6190/PRO20217Q6UXQ8 127 aa11.89□□□□□ -0.51
PCDHA1-203ENST00000504120 AMELXQ99217 191 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 FAM240AA0A1B0GVK7 77 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 C16orf95Q9H693 158 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 RPL28P46779 137 aaKnown RBP11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 M0R2N4 97 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 WFDC13Q8IUB5 93 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 COX7CP15954 63 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 NTM-AS1Q6ZSK4 140 aa11.88□□□□□ -0.51
PCDHA1-203ENST00000504120 WDR87Q6ZQQ6 2873 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 FHL2Q14192 279 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 PLAC8L1A1L4L8 177 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 BEAN1Q3B7T3 259 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 COX6A2Q02221 97 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 V9GYY9 64 aa11.87□□□□□ -0.51
PCDHA1-203ENST00000504120 TSPEAR-AS2P59090 65 aa11.86□□□□□ -0.51
PCDHA1-203ENST00000504120 SPTSSBQ8NFR3 76 aa11.86□□□□□ -0.51
PCDHA1-203ENST00000504120 LINC00694P0DN24 101 aa11.86□□□□□ -0.51
PCDHA1-203ENST00000504120 IGLV4-60A0A075B6I1 120 aa11.85□□□□□ -0.51
PCDHA1-203ENST00000504120 SPINK6Q6UWN8 80 aa11.85□□□□□ -0.51
PCDHA1-203ENST00000504120 SMR3AQ99954 134 aa11.85□□□□□ -0.51
PCDHA1-203ENST00000504120 Q8N814 137 aa11.85□□□□□ -0.51
PCDHA1-203ENST00000504120 SNURFQ9Y675 71 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 ABCA2Q9BZC7 2435 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 ARHGAP32A7KAX9 2087 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 A0A096LNJ9 63 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 Q6Q795 121 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 SVIPQ8NHG7 77 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 EML5Q05BV3 1969 aa11.84□□□□□ -0.51
PCDHA1-203ENST00000504120 MRPL55Q7Z7F7 128 aaKnown RBP11.83□□□□□ -0.52
PCDHA1-203ENST00000504120 PRRC2AP48634 2157 aaKnown RBP11.83□□□□□ -0.52
PCDHA1-203ENST00000504120 TRBV10-3A0A0K0K1G6 114 aa11.82□□□□□ -0.52
PCDHA1-203ENST00000504120 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
PCDHA1-203ENST00000504120 HRCT1Q6UXD1 115 aa11.81□□□□□ -0.52
PCDHA1-203ENST00000504120 PRR15LQ9BU68 103 aa11.81□□□□□ -0.52
PCDHA1-203ENST00000504120 IGLV9-49A0A0B4J1Y8 123 aa11.81□□□□□ -0.52
PCDHA1-203ENST00000504120 M0QXV9 152 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 ADAMTSL4-AS1Q5T5F5 129 aa11.8□□□□□ -0.52
PCDHA1-203ENST00000504120 LY6G6CO95867 125 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms