RNA–Protein interactions for RNA: ENST00000504047.1

ATXN3-208, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 426 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-208ENST00000504047 TRBV10-3A0A0K0K1G6 114 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 FAM223BA6NKX1 122 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 H7BZZ5 65 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 COX7A2LO14548 114 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 NDUFC1O43677 76 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 LYZL6O75951 148 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 DNAL4O96015 105 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 XCL1P47992 114 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 CD164Q04900 197 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 KLKP1Q107X0 134 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 RHOHQ15669 191 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 DEFB133Q30KQ1 61 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 S100A7L2Q5SY68 101 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 SPANXN1Q5VSR9 72 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 FP248Q71RG6 208 aaPredicted RBP1.29□□□□□ -2.2
ATXN3-208ENST00000504047 PRR15Q8IV56 129 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 FAM223AQ8IWN6 122 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 WFDC11Q8NEX6 87 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 Q8TAT8 98 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 BRK1Q8WUW1 75 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 RNASE6Q93091 150 aaKnown RBP1.29□□□□□ -2.2
ATXN3-208ENST00000504047 RPL39LQ96EH5 51 aaKnown RBP1.29□□□□□ -2.2
ATXN3-208ENST00000504047 OBSCN-AS1Q96MR7 158 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 RETNQ9HD89 108 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 LAMTOR3Q9UHA4 124 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 C22orf24Q9Y442 160 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 RP1P56715 2156 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 RTTNQ86VV8 2226 aa1.29□□□□□ -2.2
ATXN3-208ENST00000504047 ESPL1Q14674 2120 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 KNTC1P50748 2209 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 DIDO1Q9BTC0 2240 aaKnown RBP1.28□□□□□ -2.2
ATXN3-208ENST00000504047 DNAH12Q6ZR08 3092 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 TRAV7A0A075B6U4 112 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 A0A087WVE0 104 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 IGHV3-21A0A0B4J1V1 117 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 IGHV1-58A0A0C4DH39 117 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 IGKV3D-7A0A0C4DH55 119 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 TRBV7-6A0A0J9YX20 115 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 TRBV6-5A0A0K0K1A5 114 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 TRBV27A0A0K0K1C4 114 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 IBA57-AS1B1ANH7 110 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 C5orf67F2Z3F1 127 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 K7EIM0 57 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 M0R1W7 72 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 TRBV12-3P01733 135 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 CCKP06307 115 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 BAALC-AS2P0C853 105 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 CD28P10747 220 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 POLR2KP53803 58 aaKnown RBP1.28□□□□□ -2.2
ATXN3-208ENST00000504047 PMAIP1Q13794 54 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 LYPD5Q6UWN5 251 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 Q6ZRU5 148 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 C20orf197Q8N268 126 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 Q8N2B8 174 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 GAFA1Q96PS6 74 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 CCL13Q99616 98 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 NDUFA12Q9UI09 145 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 LENEPQ9Y5L5 61 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 SDK2Q58EX2 2172 aa1.28□□□□□ -2.2
ATXN3-208ENST00000504047 MED12Q93074 2177 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 IGHV3-64A0A075B6Q5 118 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 TRAV13-2A0A0B4J235 113 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 TRAV12-3A0A0B4J271 114 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 TRAV21A0A0B4J279 112 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 F8WEM9 126 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 NDUFA1O15239 70 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 MGPP08493 103 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 IGHV3-30-3P0DP02 117 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 HRES1P13985 223 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 RNASE4P34096 147 aaKnown RBP1.27□□□□□ -2.21
ATXN3-208ENST00000504047 RPL28P46779 137 aaKnown RBP1.27□□□□□ -2.21
ATXN3-208ENST00000504047 CMC4P56277 68 aaPredicted RBP1.27□□□□□ -2.21
ATXN3-208ENST00000504047 SNRPD3P62318 126 aaKnown RBP1.27□□□□□ -2.21
ATXN3-208ENST00000504047 RPL39P62891 51 aaKnown RBP1.27□□□□□ -2.21
ATXN3-208ENST00000504047 BLCAPP62952 87 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 RBM3P98179 157 aaKnown RBP1.27□□□□□ -2.21
ATXN3-208ENST00000504047 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 GPHB5Q86YW7 130 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 LINC00308Q8TCZ7 52 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 C14orf132Q9NPU4 83 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 LINC00846Q9NV44 126 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 LINC00474Q9P2X8 69 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 TNCP24821 2201 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 DSCAMO60469 2012 aa1.27□□□□□ -2.21
ATXN3-208ENST00000504047 CEP350Q5VT06 3117 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 NAV3Q8IVL0 2385 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 TRAV23DV6A0A075B6W5 121 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 TRBV7-4A0A0J9YYF1 115 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 H0YGX0 51 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 BUB1B-PAK6H3BSN5 160 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 ERC2-IT1O76042 136 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 CRPP02741 224 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 APELAP0DMC3 54 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 PRB4P10163 310 aaPredicted RBP1.26□□□□□ -2.21
ATXN3-208ENST00000504047 S100A4P26447 101 aaKnown RBP1.26□□□□□ -2.21
ATXN3-208ENST00000504047 CIRBPQ14011 172 aaKnown RBP1.26□□□□□ -2.21
ATXN3-208ENST00000504047 SS18Q15532 418 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 ESRGQ1W209 222 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
ATXN3-208ENST00000504047 VMO1Q7Z5L0 202 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms