RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 TSLPQ969D9 159 aa-1.21□□□□□ -2.6
SMAD1-203ENST00000502342 DPH3Q96FX2 82 aa-1.21□□□□□ -2.6
SMAD1-203ENST00000502342 SPTBN4Q9H254 2564 aa-1.22□□□□□ -2.6
SMAD1-203ENST00000502342 CFTRP13569 1480 aa-1.22□□□□□ -2.6
SMAD1-203ENST00000502342 HMGN4O00479 90 aa-1.22□□□□□ -2.6
SMAD1-203ENST00000502342 IFNGP01579 166 aa-1.22□□□□□ -2.6
SMAD1-203ENST00000502342 FDCSPQ8NFU4 85 aa-1.22□□□□□ -2.6
SMAD1-203ENST00000502342 USMG5Q96IX5 58 aa-1.22□□□□□ -2.6
SMAD1-203ENST00000502342 FAIMQ9NVQ4 179 aa-1.22□□□□□ -2.6
SMAD1-203ENST00000502342 APLNQ9ULZ1 77 aa-1.22□□□□□ -2.6
SMAD1-203ENST00000502342 BTAF1O14981 1849 aa-1.22□□□□□ -2.61
SMAD1-203ENST00000502342 LAMA2P24043 3122 aaKnown RBP-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 HMGXB3Q12766 1538 aa-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 LINC00959A0A1B0GUT2 108 aa-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 LOC285095A0A1B0GVY8 99 aa-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 B2MP61769 119 aa-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 TMEM263Q8WUH6 116 aaKnown RBP-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 ANP32BQ92688 251 aaKnown RBP-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 SETBP1Q9Y6X0 1596 aa-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 DNAH6Q9C0G6 4158 aa-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 USP9YO00507 2555 aaPredicted RBP-1.23□□□□□ -2.61
SMAD1-203ENST00000502342 GRIN2AQ12879 1464 aa-1.24□□□□□ -2.61
SMAD1-203ENST00000502342 UBA52P62987 128 aaKnown RBP-1.24□□□□□ -2.61
SMAD1-203ENST00000502342 SMIM21Q3B7S5 101 aa-1.24□□□□□ -2.61
SMAD1-203ENST00000502342 C10orf113Q5VZT2 155 aa-1.24□□□□□ -2.61
SMAD1-203ENST00000502342 AKAP14Q86UN6 197 aa-1.24□□□□□ -2.61
SMAD1-203ENST00000502342 LSM10Q969L4 123 aaKnown RBP-1.24□□□□□ -2.61
SMAD1-203ENST00000502342 SERP1Q9Y6X1 66 aa-1.24□□□□□ -2.61
SMAD1-203ENST00000502342 MAGI1Q96QZ7 1491 aaPredicted RBP-1.24□□□□□ -2.61
SMAD1-203ENST00000502342 CEP152O94986 1710 aa-1.25□□□□□ -2.61
SMAD1-203ENST00000502342 MRPL54Q6P161 138 aaKnown RBP-1.25□□□□□ -2.61
SMAD1-203ENST00000502342 PSME4Q14997 1843 aa-1.25□□□□□ -2.61
SMAD1-203ENST00000502342 PFDN5Q99471 154 aa-1.26□□□□□ -2.61
SMAD1-203ENST00000502342 RERGLQ9H628 205 aa-1.26□□□□□ -2.61
SMAD1-203ENST00000502342 NXT2Q9NPJ8 142 aaKnown RBP-1.26□□□□□ -2.61
SMAD1-203ENST00000502342 SPG11Q96JI7 2443 aa-1.26□□□□□ -2.61
SMAD1-203ENST00000502342 MYOM1P52179 1685 aa-1.26□□□□□ -2.61
SMAD1-203ENST00000502342 FMN2Q9NZ56 1722 aa-1.26□□□□□ -2.61
SMAD1-203ENST00000502342 CPSF4LA6NMK7 179 aaKnown RBP-1.27□□□□□ -2.61
SMAD1-203ENST00000502342 ARPC4P59998 168 aa-1.27□□□□□ -2.61
SMAD1-203ENST00000502342 DEFB112Q30KQ8 113 aa-1.27□□□□□ -2.61
SMAD1-203ENST00000502342 LINC01600Q96MT4 127 aa-1.27□□□□□ -2.61
SMAD1-203ENST00000502342 NAA60Q9H7X0 242 aa-1.27□□□□□ -2.61
SMAD1-203ENST00000502342 CPSF1Q10570 1443 aaKnown RBP-1.27□□□□□ -2.61
SMAD1-203ENST00000502342 PKD1P98161 4303 aa-1.28□□□□□ -2.61
SMAD1-203ENST00000502342 BIRC6Q9NR09 4857 aa-1.28□□□□□ -2.61
SMAD1-203ENST00000502342 IGLC1P0CG04 106 aa-1.28□□□□□ -2.61
SMAD1-203ENST00000502342 PPP3R2Q96LZ3 170 aa-1.28□□□□□ -2.61
SMAD1-203ENST00000502342 NBPF19A0A087WUL8 3843 aa-1.28□□□□□ -2.61
SMAD1-203ENST00000502342 MIF4GDA9UHW6 222 aaKnown RBP-1.29□□□□□ -2.62
SMAD1-203ENST00000502342 CHKB-CPT1BH3BT56 60 aa-1.29□□□□□ -2.62
SMAD1-203ENST00000502342 WHAMMP3Q1A5X7 153 aa-1.29□□□□□ -2.62
SMAD1-203ENST00000502342 UQCR10Q9UDW1 63 aa-1.29□□□□□ -2.62
SMAD1-203ENST00000502342 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.29□□□□□ -2.62
SMAD1-203ENST00000502342 NBASA2RRP1 2371 aa-1.29□□□□□ -2.62
SMAD1-203ENST00000502342 ARHGEF5Q12774 1597 aa-1.3□□□□□ -2.62
SMAD1-203ENST00000502342 TCHHQ07283 1943 aa-1.3□□□□□ -2.62
SMAD1-203ENST00000502342 FAM25AB3EWG3 89 aa-1.3□□□□□ -2.62
SMAD1-203ENST00000502342 FAM25CB3EWG5 89 aa-1.3□□□□□ -2.62
SMAD1-203ENST00000502342 FAM25GB3EWG6 89 aa-1.3□□□□□ -2.62
SMAD1-203ENST00000502342 SNRNP25Q9BV90 132 aaKnown RBP-1.3□□□□□ -2.62
SMAD1-203ENST00000502342 SPANXDQ9BXN6 97 aa-1.3□□□□□ -2.62
SMAD1-203ENST00000502342 PRO1933Q9H354 126 aa-1.3□□□□□ -2.62
SMAD1-203ENST00000502342 HECTD1Q9ULT8 2610 aa-1.31□□□□□ -2.62
SMAD1-203ENST00000502342 TACC2O95359 2948 aa-1.31□□□□□ -2.62
SMAD1-203ENST00000502342 DR1Q01658 176 aa-1.31□□□□□ -2.62
SMAD1-203ENST00000502342 FAM223AQ8IWN6 122 aa-1.31□□□□□ -2.62
SMAD1-203ENST00000502342 MYOZ3Q8TDC0 251 aa-1.31□□□□□ -2.62
SMAD1-203ENST00000502342 SPRR4Q96PI1 79 aa-1.31□□□□□ -2.62
SMAD1-203ENST00000502342 ARL2-SNX15V9GYD0 113 aa-1.31□□□□□ -2.62
SMAD1-203ENST00000502342 ITPR3Q14573 2671 aa-1.31□□□□□ -2.62
SMAD1-203ENST00000502342 ZFHX3Q15911 3703 aa-1.32□□□□□ -2.62
SMAD1-203ENST00000502342 SSSCA1O60232 199 aa-1.32□□□□□ -2.62
SMAD1-203ENST00000502342 FAM167A-AS1Q96KT0 104 aa-1.32□□□□□ -2.62
SMAD1-203ENST00000502342 TEP1Q99973 2627 aaKnown RBP-1.32□□□□□ -2.62
SMAD1-203ENST00000502342 FASNP49327 2511 aaKnown RBP-1.32□□□□□ -2.62
SMAD1-203ENST00000502342 PAPPA2Q9BXP8 1791 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 H1FX-AS1Q4G0G2 97 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 MEIG1Q5JSS6 88 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 COMMD6Q7Z4G1 85 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 A0A0G2JMZ2 1700 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 C1orf167Q5SNV9 1468 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 CCDC141Q6ZP82 1450 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 MYH7P12883 1935 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 TET3O43151 1660 aa-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 SMG6Q86US8 1419 aaKnown RBP-1.33□□□□□ -2.62
SMAD1-203ENST00000502342 CATR1Q13166 79 aa-1.34□□□□□ -2.62
SMAD1-203ENST00000502342 Q56UQ5 140 aa-1.34□□□□□ -2.62
SMAD1-203ENST00000502342 C5orf38Q86SI9 138 aa-1.34□□□□□ -2.62
SMAD1-203ENST00000502342 C8orf59Q8N0T1 100 aaPredicted RBP-1.34□□□□□ -2.62
SMAD1-203ENST00000502342 C9orf62Q8N4C0 152 aa-1.34□□□□□ -2.62
SMAD1-203ENST00000502342 LCN9Q8WX39 176 aa-1.34□□□□□ -2.62
SMAD1-203ENST00000502342 SHROOM2Q13796 1616 aa-1.34□□□□□ -2.62
SMAD1-203ENST00000502342 KNL1Q8NG31 2342 aa-1.34□□□□□ -2.62
SMAD1-203ENST00000502342 XRN1Q8IZH2 1706 aaKnown RBP-1.35□□□□□ -2.62
SMAD1-203ENST00000502342 SEC11AP67812 179 aa-1.35□□□□□ -2.63
SMAD1-203ENST00000502342 ARL11Q969Q4 196 aa-1.35□□□□□ -2.63
SMAD1-203ENST00000502342 CDC42SE2Q9NRR3 84 aa-1.35□□□□□ -2.63
SMAD1-203ENST00000502342 PKHD1L1Q86WI1 4243 aa-1.35□□□□□ -2.63
SMAD1-203ENST00000502342 EHBP1L1Q8N3D4 1523 aa-1.35□□□□□ -2.63
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms