RNA–Protein interactions for RNA: ENST00000499006.6

LINC01550-201, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 1 (best)

Gene LINC01550, Length 1,458 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-201ENST00000499006 FOXI1Q12951 378 aa12.99□□□□□ -0.33
LINC01550-201ENST00000499006 ODF1Q14990 250 aa12.99□□□□□ -0.33
LINC01550-201ENST00000499006 TM2D2Q9BX73 214 aa12.99□□□□□ -0.33
LINC01550-201ENST00000499006 IGHV3OR16-9A0A0B4J2B5 98 aa12.98□□□□□ -0.33
LINC01550-201ENST00000499006 TINCRA0A1B0GVN0 87 aa12.98□□□□□ -0.33
LINC01550-201ENST00000499006 IGLC3P0DOY3 106 aa12.98□□□□□ -0.33
LINC01550-201ENST00000499006 SEC11AP67812 179 aa12.98□□□□□ -0.33
LINC01550-201ENST00000499006 MAPKAPK5-AS1Q8N8E1 139 aa12.98□□□□□ -0.33
LINC01550-201ENST00000499006 CHTOPQ9Y3Y2 248 aaKnown RBP12.98□□□□□ -0.33
LINC01550-201ENST00000499006 GAGE12HA6NDE8 117 aa12.97□□□□□ -0.33
LINC01550-201ENST00000499006 DNAH17Q9UFH2 4485 aa12.97□□□□□ -0.33
LINC01550-201ENST00000499006 F8VRH5 84 aa12.97□□□□□ -0.33
LINC01550-201ENST00000499006 KRTDAPP60985 99 aa12.97□□□□□ -0.33
LINC01550-201ENST00000499006 PET117Q6UWS5 81 aa12.97□□□□□ -0.33
LINC01550-201ENST00000499006 MRPL35Q9NZE8 188 aaKnown RBP12.97□□□□□ -0.33
LINC01550-201ENST00000499006 HERVK_113P63121 156 aa12.96□□□□□ -0.34
LINC01550-201ENST00000499006 IGLV5-45A0A087WSX0 123 aa12.95□□□□□ -0.34
LINC01550-201ENST00000499006 RTL8CO15255 209 aa12.95□□□□□ -0.34
LINC01550-201ENST00000499006 LINC01545Q5VT33 79 aa12.95□□□□□ -0.34
LINC01550-201ENST00000499006 CHAC1Q9BUX1 264 aa12.94□□□□□ -0.34
LINC01550-201ENST00000499006 GEMIN7Q9H840 131 aaKnown RBP12.94□□□□□ -0.34
LINC01550-201ENST00000499006 C11orf86A6NJI1 115 aa12.93□□□□□ -0.34
LINC01550-201ENST00000499006 PSCAO43653 123 aa12.93□□□□□ -0.34
LINC01550-201ENST00000499006 CDKN2A-AS1Q9UH64 79 aa12.93□□□□□ -0.34
LINC01550-201ENST00000499006 A0A087WZ39 114 aa12.92□□□□□ -0.34
LINC01550-201ENST00000499006 COX7A2LO14548 114 aa12.92□□□□□ -0.34
LINC01550-201ENST00000499006 C5orf38Q86SI9 138 aa12.92□□□□□ -0.34
LINC01550-201ENST00000499006 OR10D4PQ8NGN7 298 aa12.92□□□□□ -0.34
LINC01550-201ENST00000499006 PMCHL2Q9BQD1 86 aa12.92□□□□□ -0.34
LINC01550-201ENST00000499006 RYR3Q15413 4870 aa12.91□□□□□ -0.34
LINC01550-201ENST00000499006 LRCOL1A6NCL2 159 aa12.91□□□□□ -0.34
LINC01550-201ENST00000499006 ZNF22P17026 224 aaPredicted RBP12.91□□□□□ -0.34
LINC01550-201ENST00000499006 PLNP26678 52 aa12.91□□□□□ -0.34
LINC01550-201ENST00000499006 LINC00469Q8N7U9 141 aa12.91□□□□□ -0.34
LINC01550-201ENST00000499006 DPM2O94777 84 aa12.9□□□□□ -0.34
LINC01550-201ENST00000499006 LINC01561Q8N1V8 128 aa12.9□□□□□ -0.34
LINC01550-201ENST00000499006 FAT2Q9NYQ8 4349 aa12.88□□□□□ -0.35
LINC01550-201ENST00000499006 IGKCP01834 107 aa12.88□□□□□ -0.35
LINC01550-201ENST00000499006 WFDC2Q14508 124 aa12.88□□□□□ -0.35
LINC01550-201ENST00000499006 C15orf56Q8N910 161 aa12.88□□□□□ -0.35
LINC01550-201ENST00000499006 C20orf202A1L168 122 aa12.86□□□□□ -0.35
LINC01550-201ENST00000499006 USP17L23D6RBM5 183 aa12.86□□□□□ -0.35
LINC01550-201ENST00000499006 MALP21145 153 aa12.86□□□□□ -0.35
LINC01550-201ENST00000499006 TMEM170BQ5T4T1 132 aa12.86□□□□□ -0.35
LINC01550-201ENST00000499006 IGHV1-58A0A0C4DH39 117 aa12.85□□□□□ -0.35
LINC01550-201ENST00000499006 SMIM1B2RUZ4 78 aa12.85□□□□□ -0.35
LINC01550-201ENST00000499006 H3BRM9 83 aa12.85□□□□□ -0.35
LINC01550-201ENST00000499006 TNP2Q05952 138 aa12.85□□□□□ -0.35
LINC01550-201ENST00000499006 IGHV3-64A0A075B6Q5 118 aa12.85□□□□□ -0.35
LINC01550-201ENST00000499006 A0A087WTM6 91 aa12.85□□□□□ -0.35
LINC01550-201ENST00000499006 LECT2O14960 151 aa12.85□□□□□ -0.35
LINC01550-201ENST00000499006 CFAP161Q6P656 301 aa12.85□□□□□ -0.35
LINC01550-201ENST00000499006 TMEM223A0PJW6 202 aa12.84□□□□□ -0.35
LINC01550-201ENST00000499006 APOMO95445 188 aa12.84□□□□□ -0.35
LINC01550-201ENST00000499006 SPINK8P0C7L1 97 aa12.84□□□□□ -0.35
LINC01550-201ENST00000499006 GVQW2A0A096LPI5 108 aaPredicted RBP12.82□□□□□ -0.36
LINC01550-201ENST00000499006 LINC00336Q6ZUF6 198 aa12.82□□□□□ -0.36
LINC01550-201ENST00000499006 IGLV5-39A0A0G2JS06 123 aa12.81□□□□□ -0.36
LINC01550-201ENST00000499006 AKR1D1P51857 326 aa12.81□□□□□ -0.36
LINC01550-201ENST00000499006 ORAOV1Q8WV07 137 aa12.81□□□□□ -0.36
LINC01550-201ENST00000499006 KIAA0087Q14695 138 aa12.8□□□□□ -0.36
LINC01550-201ENST00000499006 JOSD1Q15040 202 aaPredicted RBP12.8□□□□□ -0.36
LINC01550-201ENST00000499006 HIGD2BQ4VC39 106 aa12.8□□□□□ -0.36
LINC01550-201ENST00000499006 C14orf177Q52M58 125 aa12.8□□□□□ -0.36
LINC01550-201ENST00000499006 DNAH11Q96DT5 4516 aa12.8□□□□□ -0.36
LINC01550-201ENST00000499006 SCGB1D1O95968 90 aa12.79□□□□□ -0.36
LINC01550-201ENST00000499006 ATOH7Q8N100 152 aa12.79□□□□□ -0.36
LINC01550-201ENST00000499006 Q8N814 137 aa12.79□□□□□ -0.36
LINC01550-201ENST00000499006 PKD1P98161 4303 aa12.79□□□□□ -0.36
LINC01550-201ENST00000499006 hDV102S1A0JD36 115 aa12.78□□□□□ -0.36
LINC01550-201ENST00000499006 SPAG11BQ08648 103 aa12.78□□□□□ -0.36
LINC01550-201ENST00000499006 Q8IZM0 81 aa12.78□□□□□ -0.36
LINC01550-201ENST00000499006 LINC00526Q96FQ7 95 aa12.78□□□□□ -0.36
LINC01550-201ENST00000499006 STPG4Q8N801 248 aa12.77□□□□□ -0.37
LINC01550-201ENST00000499006 HECTD4Q9Y4D8 3996 aa12.76□□□□□ -0.37
LINC01550-201ENST00000499006 LOC105371267A0A1B0GV96 52 aa12.76□□□□□ -0.37
LINC01550-201ENST00000499006 ZNF561-AS1K7EIQ3 104 aa12.76□□□□□ -0.37
LINC01550-201ENST00000499006 PYY3Q5JQD4 70 aa12.76□□□□□ -0.37
LINC01550-201ENST00000499006 NTN5Q8WTR8 489 aaPredicted RBP12.76□□□□□ -0.37
LINC01550-201ENST00000499006 SLPIP03973 132 aa12.75□□□□□ -0.37
LINC01550-201ENST00000499006 HERVK_113P61574 105 aa12.75□□□□□ -0.37
LINC01550-201ENST00000499006 COX7B2Q8TF08 81 aa12.75□□□□□ -0.37
LINC01550-201ENST00000499006 TOMM7Q9P0U1 55 aa12.75□□□□□ -0.37
LINC01550-201ENST00000499006 E9PLD3 99 aa12.74□□□□□ -0.37
LINC01550-201ENST00000499006 EREGO14944 169 aa12.74□□□□□ -0.37
LINC01550-201ENST00000499006 C2orf48Q96LS8 159 aa12.74□□□□□ -0.37
LINC01550-201ENST00000499006 PRSS2P07478 247 aa12.73□□□□□ -0.37
LINC01550-201ENST00000499006 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.72□□□□□ -0.37
LINC01550-201ENST00000499006 F8WDY8 70 aa12.72□□□□□ -0.37
LINC01550-201ENST00000499006 LEPROTO15243 131 aa12.72□□□□□ -0.37
LINC01550-201ENST00000499006 CNBPP62633 177 aaKnown RBP12.72□□□□□ -0.37
LINC01550-201ENST00000499006 MAJINQ3KP22 176 aa12.72□□□□□ -0.37
LINC01550-201ENST00000499006 C6orf226Q5I0X4 101 aa12.72□□□□□ -0.37
LINC01550-201ENST00000499006 A0A1B0GVY2 172 aa12.71□□□□□ -0.38
LINC01550-201ENST00000499006 TSPEAR-AS2P59090 65 aa12.71□□□□□ -0.38
LINC01550-201ENST00000499006 ANKRD39Q53RE8 183 aa12.71□□□□□ -0.38
LINC01550-201ENST00000499006 C2orf82Q6UX34 121 aa12.71□□□□□ -0.38
LINC01550-201ENST00000499006 PLEKHB2Q96CS7 222 aa12.71□□□□□ -0.38
LINC01550-201ENST00000499006 IGKV2D-26A0A0A0MRZ7 120 aa12.7□□□□□ -0.38
LINC01550-201ENST00000499006 CXCL5P42830 114 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms