RNA–Protein interactions for RNA: ENST00000498569.5

NF1-217, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-217ENST00000498569 TEX261Q6UWH6 196 aa3.01□□□□□ -1.93
NF1-217ENST00000498569 TMUB2Q71RG4 321 aa3.01□□□□□ -1.93
NF1-217ENST00000498569 KRTAP11-1Q8IUC1 163 aa3.01□□□□□ -1.93
NF1-217ENST00000498569 TYMSOSQ8TAI1 123 aa3.01□□□□□ -1.93
NF1-217ENST00000498569 MARVELD1Q9BSK0 173 aa3.01□□□□□ -1.93
NF1-217ENST00000498569 RPP21Q9H633 154 aaKnown RBP3.01□□□□□ -1.93
NF1-217ENST00000498569 GAGE2DQ9UEU5 116 aa3.01□□□□□ -1.93
NF1-217ENST00000498569 ALG5Q9Y673 324 aa3.01□□□□□ -1.93
NF1-217ENST00000498569 FXYD6-FXYD2A0A087WZ82 144 aa3□□□□□ -1.93
NF1-217ENST00000498569 TRAV13-1A0A0B4J241 112 aa3□□□□□ -1.93
NF1-217ENST00000498569 C7orf77A4D0Y5 90 aa3□□□□□ -1.93
NF1-217ENST00000498569 G3V3Q6 166 aa3□□□□□ -1.93
NF1-217ENST00000498569 ZNF861PO60384 105 aa3□□□□□ -1.93
NF1-217ENST00000498569 UPK1BO75841 260 aa3□□□□□ -1.93
NF1-217ENST00000498569 CRYGAP11844 174 aa3□□□□□ -1.93
NF1-217ENST00000498569 CTRLP40313 264 aa3□□□□□ -1.93
NF1-217ENST00000498569 GNG4P50150 75 aa3□□□□□ -1.93
NF1-217ENST00000498569 C5orf38Q86SI9 138 aa3□□□□□ -1.93
NF1-217ENST00000498569 KCNRGQ8N5I3 272 aa3□□□□□ -1.93
NF1-217ENST00000498569 OR10D4PQ8NGN7 298 aa3□□□□□ -1.93
NF1-217ENST00000498569 FAM213BQ8TBF2 198 aa3□□□□□ -1.93
NF1-217ENST00000498569 ORAOV1Q8WV07 137 aa3□□□□□ -1.93
NF1-217ENST00000498569 SFT2D1Q8WV19 159 aa3□□□□□ -1.93
NF1-217ENST00000498569 CDC42SE2Q9NRR3 84 aa3□□□□□ -1.93
NF1-217ENST00000498569 TMEM242Q9NWH2 141 aa3□□□□□ -1.93
NF1-217ENST00000498569 MRPL35Q9NZE8 188 aaKnown RBP3□□□□□ -1.93
NF1-217ENST00000498569 IGLV7-46A0A075B6I9 117 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 A0A087X002 238 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 F8WDY8 70 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 TSHBP01222 138 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 RNASE13Q5GAN3 156 aaKnown RBP2.99□□□□□ -1.93
NF1-217ENST00000498569 LINC00173Q6ZV60 143 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 MRPL52Q86TS9 123 aaKnown RBP2.99□□□□□ -1.93
NF1-217ENST00000498569 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 SMDT1Q9H4I9 107 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 ST20Q9HBF5 79 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 BIN3Q9NQY0 253 aa2.99□□□□□ -1.93
NF1-217ENST00000498569 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 NUPR1O60356 82 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 TLX1NBP0CAT3 122 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 FCER1GP30273 86 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 RPL28P46779 137 aaKnown RBP2.98□□□□□ -1.93
NF1-217ENST00000498569 C9orf62Q8N4C0 152 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 SMIM12Q96EX1 92 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 FAM210AQ96ND0 272 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 CNFNQ9BYD5 112 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 MANBALQ9NQG1 85 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 C6orf48Q9UBA6 75 aa2.98□□□□□ -1.93
NF1-217ENST00000498569 TRBV6-5A0A0K0K1A5 114 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 RAB19A4D1S5 217 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 UMAD1C9J7I0 102 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 GIPP09681 153 aaPredicted RBP2.97□□□□□ -1.93
NF1-217ENST00000498569 TMEM241Q24JQ0 296 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 UNQ6190/PRO20217Q6UXQ8 127 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 LINC00299Q6ZSB3 139 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 Q6ZUT4 128 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 LINC00337Q8N6G1 96 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 C11orf52Q96A22 123 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 CTDSP1Q9GZU7 261 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 RNASE7Q9H1E1 156 aaKnown RBP2.97□□□□□ -1.93
NF1-217ENST00000498569 PPDPFQ9H3Y8 114 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 GNG13Q9P2W3 67 aa2.97□□□□□ -1.93
NF1-217ENST00000498569 TRBV30A0A0K0K1B3 111 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 NDUFC2-KCTD14E9PQ53 114 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 ARPC5O15511 151 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 FOXA3P55318 350 aaPredicted RBP2.96□□□□□ -1.94
NF1-217ENST00000498569 CCL20P78556 96 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 IFITM3Q01628 133 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 LBHQ53QV2 105 aaPredicted RBP2.96□□□□□ -1.94
NF1-217ENST00000498569 Q5BKY6 102 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 LCE1FQ5T754 118 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 KRTAP7-1Q8IUC3 87 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 MBD3L1Q8WWY6 194 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 TMEM18Q96B42 140 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 BORCS7Q96B45 105 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 PACRGQ96M98 296 aaPredicted RBP2.96□□□□□ -1.94
NF1-217ENST00000498569 NDUFA13Q9P0J0 144 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 UBE2D4Q9Y2X8 147 aa2.96□□□□□ -1.94
NF1-217ENST00000498569 CSDC2Q9Y534 153 aaKnown RBP2.96□□□□□ -1.94
NF1-217ENST00000498569 IGKV2D-26A0A0A0MRZ7 120 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 TGIF2-C20orf24A0A0A6YYL0 155 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 TRBV27A0A0K0K1C4 114 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 TEX46H3BTG2 121 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 PDE6DO43924 150 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 TNFRSF6BO95407 300 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 C9orf129Q5T035 196 aaKnown RBP2.95□□□□□ -1.94
NF1-217ENST00000498569 KIR2DL4Q99706 377 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 CYTL1Q9NRR1 136 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 MED9Q9NWA0 146 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 ANAPC11Q9NYG5 84 aa2.95□□□□□ -1.94
NF1-217ENST00000498569 TRBV20OR9-2A0A075B6H5 130 aa2.94□□□□□ -1.94
NF1-217ENST00000498569 VCYO14598 125 aa2.94□□□□□ -1.94
NF1-217ENST00000498569 BCE1O60756 84 aa2.94□□□□□ -1.94
NF1-217ENST00000498569 UBE2AP49459 152 aa2.94□□□□□ -1.94
NF1-217ENST00000498569 POLR2KP53803 58 aaKnown RBP2.94□□□□□ -1.94
NF1-217ENST00000498569 SEC61BP60468 96 aaKnown RBP2.94□□□□□ -1.94
NF1-217ENST00000498569 ASB16-AS1Q495Z4 193 aa2.94□□□□□ -1.94
NF1-217ENST00000498569 FAM229BQ4G0N7 80 aa2.94□□□□□ -1.94
NF1-217ENST00000498569 KRTAP13-2Q52LG2 175 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms