RNA–Protein interactions for RNA: ENST00000498529.5

CSNK1E-214, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-214ENST00000498529 ZFP2Q6ZN57 461 aa3.51□□□□□ -1.85
CSNK1E-214ENST00000498529 SPACA4Q8TDM5 124 aa3.51□□□□□ -1.85
CSNK1E-214ENST00000498529 HIST1H2BHQ93079 126 aa3.51□□□□□ -1.85
CSNK1E-214ENST00000498529 MRAP2Q96G30 205 aa3.51□□□□□ -1.85
CSNK1E-214ENST00000498529 HIST1H2BNQ99877 126 aa3.51□□□□□ -1.85
CSNK1E-214ENST00000498529 HIST1H2BMQ99879 126 aa3.51□□□□□ -1.85
CSNK1E-214ENST00000498529 PRADC1Q9BSG0 188 aa3.51□□□□□ -1.85
CSNK1E-214ENST00000498529 JPT2Q9H910 190 aa3.51□□□□□ -1.85
CSNK1E-214ENST00000498529 IGKV2D-24A0A075B6R9 120 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 TRAV26-2A0A0B4J265 109 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 PPP1R17O96001 155 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 RAB4AP20338 218 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 CNBPP62633 177 aaKnown RBP3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 RMI2Q96E14 147 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 ALKBH7Q9BT30 221 aaPredicted RBP3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 CNFNQ9BYD5 112 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 ST20Q9HBF5 79 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 PRR34Q9NV39 138 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 PLAC8Q9NZF1 115 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 KLK12Q9UKR0 248 aa3.5□□□□□ -1.85
CSNK1E-214ENST00000498529 hDV102S1A0JD36 115 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 SERF1AO75920 110 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 NPYP01303 97 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 FABP4P15090 132 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 FCER1GP30273 86 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 AMTP48728 403 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 PRR3P79522 188 aaKnown RBP3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 GAGE1Q13065 139 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 GAGE4Q13068 117 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 GAGE5Q13069 117 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 UBE2V1Q13404 147 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 C14orf177Q52M58 125 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 GATD1Q8NB37 220 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 C18orf32Q8TCD1 76 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 NXT2Q9NPJ8 142 aaKnown RBP3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 LAMTOR2Q9Y2Q5 125 aa3.49□□□□□ -1.85
CSNK1E-214ENST00000498529 A0A087WYN8 130 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 H0Y8G0 127 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 PHOX2AO14813 284 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 CHTF8P0CG12 524 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 UBE2D3P61077 147 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 UBE2D2P62837 147 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 RPL36AP83881 106 aaKnown RBP3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 Q0VG73 95 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 MPV17L2Q567V2 206 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 PAPPA-AS1Q5QFB9 102 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 PET117Q6UWS5 81 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 RPL36ALQ969Q0 106 aaKnown RBP3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 UBE2WQ96B02 151 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 CHCHD1Q96BP2 118 aaKnown RBP3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 RPL39LQ96EH5 51 aaKnown RBP3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 RNF185Q96GF1 192 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 KIR2DL4Q99706 377 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 KIF25-AS1Q9Y6Z4 181 aa3.48□□□□□ -1.85
CSNK1E-214ENST00000498529 LINC00614P0C842 121 aa3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 IFI27P40305 119 aaPredicted RBP3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 SEC61BP60468 96 aaKnown RBP3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 SRSF9Q13242 221 aaKnown RBP eCLIP3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 PMCHL1Q16048 86 aa3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 NRACQ8N912 160 aa3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 NEXN-AS1Q8NBZ9 246 aa3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 PACRGQ96M98 296 aaPredicted RBP3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 SMIM2Q9BVW6 85 aa3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 NIT2Q9NQR4 276 aa3.47□□□□□ -1.85
CSNK1E-214ENST00000498529 C20orf202A1L168 122 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 SDHAF1A6NFY7 115 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 C5orf52A6NGY3 159 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 UBE2L6O14933 153 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 TCAPO15273 167 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 LEPROTL1O95214 131 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 HBDP02042 147 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 G0S2P27469 103 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 KRTDAPP60985 99 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 COTL1Q14019 142 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 MIAQ16674 131 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 ORMDL2Q53FV1 153 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 NTM-AS1Q6ZSK4 140 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 HIST3H2BBQ8N257 126 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 FAM19A2Q8N3H0 131 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 Q8N8P6 123 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 OR10D4PQ8NGN7 298 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 C20orf78Q9BR46 151 aa3.46□□□□□ -1.86
CSNK1E-214ENST00000498529 TRBV6-8A0A0A6YYG3 113 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 IGHV1-24A0A0C4DH33 117 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 TRBV10-1A0A0K0K1A3 114 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 I3L3M4 83 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 SMAGPQ0VAQ4 97 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 Q6ZN92 141 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 PRR26Q8N8Z3 221 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 C15orf56Q8N910 161 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 MAP1LC3CQ9BXW4 147 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 HSPB8Q9UJY1 196 aa3.45□□□□□ -1.86
CSNK1E-214ENST00000498529 LOC105371267A0A1B0GV96 52 aa3.44□□□□□ -1.86
CSNK1E-214ENST00000498529 M0QY20 66 aa3.44□□□□□ -1.86
CSNK1E-214ENST00000498529 GAGE2BQ13066 116 aa3.44□□□□□ -1.86
CSNK1E-214ENST00000498529 GAGE2EQ4V326 116 aa3.44□□□□□ -1.86
CSNK1E-214ENST00000498529 COA6Q5JTJ3 125 aaKnown RBP3.44□□□□□ -1.86
CSNK1E-214ENST00000498529 AMMECR1LQ6DCA0 310 aa3.44□□□□□ -1.86
CSNK1E-214ENST00000498529 GAGE2AQ6NT46 116 aa3.44□□□□□ -1.86
CSNK1E-214ENST00000498529 SCGB3A1Q96QR1 104 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms